RNA–Protein interactions for RNA: ENST00000463440.1

COL1A1-202, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 614 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-202ENST00000463440 CNBD1Q8NA66 436 aa21.16■□□□□ 0.98
COL1A1-202ENST00000463440 ERVV-1B6SEH8 477 aa21.15■□□□□ 0.98
COL1A1-202ENST00000463440 BRIP1Q9BX63 1249 aa21.15■□□□□ 0.98
COL1A1-202ENST00000463440 PDZRN3Q9UPQ7 1066 aa21.15■□□□□ 0.98
COL1A1-202ENST00000463440 NIP7Q9Y221 180 aaKnown RBP eCLIP21.15■□□□□ 0.98
COL1A1-202ENST00000463440 MAP3K15Q6ZN16 1313 aa21.14■□□□□ 0.97
COL1A1-202ENST00000463440 H0YIN7 160 aa21.14■□□□□ 0.97
COL1A1-202ENST00000463440 PDE6BP35913 854 aa21.14■□□□□ 0.97
COL1A1-202ENST00000463440 ST5P78524 1137 aa21.14■□□□□ 0.97
COL1A1-202ENST00000463440 NBPF5PQ86XG9 351 aaPredicted RBP21.14■□□□□ 0.97
COL1A1-202ENST00000463440 C2CD5Q86YS7 1000 aa21.14■□□□□ 0.97
COL1A1-202ENST00000463440 GNAI1P63096 354 aa21.13■□□□□ 0.97
COL1A1-202ENST00000463440 HLFQ16534 295 aa21.13■□□□□ 0.97
COL1A1-202ENST00000463440 ARHGAP27Q6ZUM4 889 aa21.13■□□□□ 0.97
COL1A1-202ENST00000463440 IFT57Q9NWB7 429 aa21.13■□□□□ 0.97
COL1A1-202ENST00000463440 HOXB7P09629 217 aa21.12■□□□□ 0.97
COL1A1-202ENST00000463440 PDIA6Q15084 440 aa21.12■□□□□ 0.97
COL1A1-202ENST00000463440 KRT24Q2M2I5 525 aa21.12■□□□□ 0.97
COL1A1-202ENST00000463440 TTLL7Q6ZT98 887 aa21.12■□□□□ 0.97
COL1A1-202ENST00000463440 CCDC24Q8N4L8 307 aa21.12■□□□□ 0.97
COL1A1-202ENST00000463440 MBIPQ9NS73 344 aa21.12■□□□□ 0.97
COL1A1-202ENST00000463440 ARFGEF1Q9Y6D6 1849 aa21.11■□□□□ 0.97
COL1A1-202ENST00000463440 ZNF853P0CG23 659 aa21.11■□□□□ 0.97
COL1A1-202ENST00000463440 TPTE2Q6XPS3 522 aa21.11■□□□□ 0.97
COL1A1-202ENST00000463440 NECTIN2Q92692 538 aa21.11■□□□□ 0.97
COL1A1-202ENST00000463440 TTLL6Q8N841 843 aa21.1■□□□□ 0.97
COL1A1-202ENST00000463440 ZBTB3Q9H5J0 574 aa21.1■□□□□ 0.97
COL1A1-202ENST00000463440 ANKRD31Q8N7Z5 1873 aa21.09■□□□□ 0.97
COL1A1-202ENST00000463440 CCDC27Q2M243 656 aa21.09■□□□□ 0.97
COL1A1-202ENST00000463440 HDGFL1Q5TGJ6 251 aa21.09■□□□□ 0.97
COL1A1-202ENST00000463440 LRP10Q7Z4F1 713 aa21.09■□□□□ 0.97
COL1A1-202ENST00000463440 DDX21Q9NR30 783 aaKnown RBP eCLIP21.09■□□□□ 0.97
COL1A1-202ENST00000463440 DLEC1Q9Y238 1755 aa21.09■□□□□ 0.97
COL1A1-202ENST00000463440 FAM177BA6PVY3 158 aa21.08■□□□□ 0.97
COL1A1-202ENST00000463440 ANXA1P04083 346 aa21.08■□□□□ 0.97
COL1A1-202ENST00000463440 PROSER3Q2NL68 480 aa21.08■□□□□ 0.97
COL1A1-202ENST00000463440 DUSP27Q5VZP5 1158 aa21.08■□□□□ 0.97
COL1A1-202ENST00000463440 ZNF622Q969S3 477 aaKnown RBP eCLIP21.08■□□□□ 0.97
COL1A1-202ENST00000463440 ATP10DQ9P241 1426 aa21.08■□□□□ 0.97
COL1A1-202ENST00000463440 NUP98P52948 1817 aa21.08■□□□□ 0.96
COL1A1-202ENST00000463440 GTF2E1P29083 439 aaPredicted RBP21.07■□□□□ 0.96
COL1A1-202ENST00000463440 GIGYF2Q6Y7W6 1299 aaKnown RBP21.07■□□□□ 0.96
COL1A1-202ENST00000463440 NYXQ9GZU5 481 aa21.07■□□□□ 0.96
COL1A1-202ENST00000463440 NCBP3Q53F19 620 aaKnown RBP21.06■□□□□ 0.96
COL1A1-202ENST00000463440 GPTP24298 496 aa21.05■□□□□ 0.96
COL1A1-202ENST00000463440 AIMP1Q12904 312 aaKnown RBP21.05■□□□□ 0.96
COL1A1-202ENST00000463440 COPS6Q7L5N1 327 aa21.05■□□□□ 0.96
COL1A1-202ENST00000463440 WWC1Q8IX03 1113 aa21.05■□□□□ 0.96
COL1A1-202ENST00000463440 XAGE3Q8WTP9 111 aa21.05■□□□□ 0.96
COL1A1-202ENST00000463440 CHPF2Q9P2E5 772 aa21.05■□□□□ 0.96
COL1A1-202ENST00000463440 DBF4Q9UBU7 674 aaPredicted RBP21.05■□□□□ 0.96
COL1A1-202ENST00000463440 ADCY9O60503 1353 aa21.05■□□□□ 0.96
COL1A1-202ENST00000463440 SENP3-EIF4A1A0A087X0R7 540 aa21.04■□□□□ 0.96
COL1A1-202ENST00000463440 SRGNP10124 158 aa21.04■□□□□ 0.96
COL1A1-202ENST00000463440 STYK1Q6J9G0 422 aa21.04■□□□□ 0.96
COL1A1-202ENST00000463440 ZNF34Q8IZ26 560 aa21.04■□□□□ 0.96
COL1A1-202ENST00000463440 CNKSR1Q969H4 720 aa21.04■□□□□ 0.96
COL1A1-202ENST00000463440 FAM9BQ8IZU0 186 aa21.03■□□□□ 0.96
COL1A1-202ENST00000463440 MASTLQ96GX5 879 aa21.03■□□□□ 0.96
COL1A1-202ENST00000463440 COL11A2P13942 1736 aaPredicted RBP21.03■□□□□ 0.96
COL1A1-202ENST00000463440 IBTKQ9P2D0 1353 aaPredicted RBP21.02■□□□□ 0.96
COL1A1-202ENST00000463440 PARP10Q53GL7 1025 aa21.02■□□□□ 0.96
COL1A1-202ENST00000463440 HSP90AB3PQ58FF7 597 aa21.02■□□□□ 0.96
COL1A1-202ENST00000463440 CHMP4AQ9BY43 222 aa21.02■□□□□ 0.96
COL1A1-202ENST00000463440 HYPKQ9NX55 129 aa21.02■□□□□ 0.96
COL1A1-202ENST00000463440 UBN2Q6ZU65 1347 aa21.02■□□□□ 0.95
COL1A1-202ENST00000463440 KLRG2A4D1S0 409 aaPredicted RBP21.01■□□□□ 0.95
COL1A1-202ENST00000463440 ELL2O00472 640 aaPredicted RBP21.01■□□□□ 0.95
COL1A1-202ENST00000463440 NPR1P16066 1061 aa21.01■□□□□ 0.95
COL1A1-202ENST00000463440 PPP1R42Q7Z4L9 355 aa21.01■□□□□ 0.95
COL1A1-202ENST00000463440 IL16Q14005 1332 aa21.01■□□□□ 0.95
COL1A1-202ENST00000463440 SUSD4Q5VX71 490 aa21■□□□□ 0.95
COL1A1-202ENST00000463440 C9orf131Q5VYM1 1079 aa21■□□□□ 0.95
COL1A1-202ENST00000463440 NUTM1Q86Y26 1132 aa21■□□□□ 0.95
COL1A1-202ENST00000463440 C8orf58Q8NAV2 365 aa21■□□□□ 0.95
COL1A1-202ENST00000463440 ERFEQ4G0M1 354 aa20.99■□□□□ 0.95
COL1A1-202ENST00000463440 GPBP1L1Q9HC44 474 aaPredicted RBP20.99■□□□□ 0.95
COL1A1-202ENST00000463440 C21orf2O43822 256 aa20.98■□□□□ 0.95
COL1A1-202ENST00000463440 PRPF40BQ6NWY9 871 aaKnown RBP20.98■□□□□ 0.95
COL1A1-202ENST00000463440 PLBD2Q8NHP8 589 aa20.98■□□□□ 0.95
COL1A1-202ENST00000463440 ZNF526Q8TF50 670 aaPredicted RBP20.98■□□□□ 0.95
COL1A1-202ENST00000463440 TSR2Q969E8 191 aaKnown RBP20.98■□□□□ 0.95
COL1A1-202ENST00000463440 RNF181Q9P0P0 153 aa20.98■□□□□ 0.95
COL1A1-202ENST00000463440 ZNF219Q9P2Y4 722 aaPredicted RBP20.98■□□□□ 0.95
COL1A1-202ENST00000463440 SALL2Q9Y467 1007 aaPredicted RBP20.98■□□□□ 0.95
COL1A1-202ENST00000463440 ABCC12Q96J65 1359 aa20.97■□□□□ 0.95
COL1A1-202ENST00000463440 NTSR2O95665 410 aa20.97■□□□□ 0.95
COL1A1-202ENST00000463440 TCIRG1Q13488 830 aa20.97■□□□□ 0.95
COL1A1-202ENST00000463440 ANKRD13DQ6ZTN6 518 aa20.97■□□□□ 0.95
COL1A1-202ENST00000463440 WDR63Q8IWG1 891 aa20.97■□□□□ 0.95
COL1A1-202ENST00000463440 UTP14AQ9BVJ6 771 aaKnown RBP20.97■□□□□ 0.95
COL1A1-202ENST00000463440 RASSF7Q02833 373 aa20.96■□□□□ 0.95
COL1A1-202ENST00000463440 SOGA3Q5TF21 947 aa20.96■□□□□ 0.95
COL1A1-202ENST00000463440 CCDC30Q5VVM6 783 aa20.96■□□□□ 0.95
COL1A1-202ENST00000463440 RIC1Q4ADV7 1423 aa20.95■□□□□ 0.95
COL1A1-202ENST00000463440 LMNB1P20700 586 aa20.95■□□□□ 0.94
COL1A1-202ENST00000463440 ALDH1B1P30837 517 aa20.95■□□□□ 0.94
COL1A1-202ENST00000463440 RNF123Q5XPI4 1314 aa20.95■□□□□ 0.94
COL1A1-202ENST00000463440 ANKRD36CQ5JPF3 1778 aa20.95■□□□□ 0.94
COL1A1-202ENST00000463440 ARFGEF2Q9Y6D5 1785 aa20.95■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms