RNA–Protein interactions for RNA: ENST00000463222.1

VRK2-208, Transcript of vaccinia related kinase 2, humanhuman

TSL 3

Gene VRK2, Length 492 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-208ENST00000463222 ALKBH2Q6NS38 261 aa7.35□□□□□ -1.23
VRK2-208ENST00000463222 ZDHHC1Q8WTX9 485 aa7.35□□□□□ -1.23
VRK2-208ENST00000463222 EML1O00423 815 aa7.34□□□□□ -1.23
VRK2-208ENST00000463222 TREHO43280 583 aa7.34□□□□□ -1.23
VRK2-208ENST00000463222 NOS2P35228 1153 aa7.34□□□□□ -1.23
VRK2-208ENST00000463222 PTGIRP43119 386 aa7.34□□□□□ -1.23
VRK2-208ENST00000463222 MAPK8P45983 427 aa7.34□□□□□ -1.23
VRK2-208ENST00000463222 WDR4P57081 412 aaKnown RBP7.34□□□□□ -1.23
VRK2-208ENST00000463222 TEAD4Q15561 434 aa7.34□□□□□ -1.23
VRK2-208ENST00000463222 TSNAXIP1Q2TAA8 658 aa7.34□□□□□ -1.23
VRK2-208ENST00000463222 ZNF395Q9H8N7 513 aaPredicted RBP7.34□□□□□ -1.23
VRK2-208ENST00000463222 SHROOM4Q9ULL8 1493 aa7.34□□□□□ -1.23
VRK2-208ENST00000463222 VAMP1P23763 118 aa7.33□□□□□ -1.24
VRK2-208ENST00000463222 BRD2P25440 801 aaKnown RBP7.33□□□□□ -1.24
VRK2-208ENST00000463222 CLN3Q13286 438 aa7.33□□□□□ -1.24
VRK2-208ENST00000463222 DSC3Q14574 896 aa7.33□□□□□ -1.24
VRK2-208ENST00000463222 ALDH16A1Q8IZ83 802 aa7.33□□□□□ -1.24
VRK2-208ENST00000463222 L3MBTL2Q969R5 705 aa7.33□□□□□ -1.24
VRK2-208ENST00000463222 ITPKCQ96DU7 683 aa7.33□□□□□ -1.24
VRK2-208ENST00000463222 MYO19Q96H55 970 aa7.33□□□□□ -1.24
VRK2-208ENST00000463222 NLRP3Q96P20 1036 aa7.33□□□□□ -1.24
VRK2-208ENST00000463222 FHDC1Q9C0D6 1143 aaPredicted RBP7.33□□□□□ -1.24
VRK2-208ENST00000463222 ZFAND3Q9H8U3 227 aa7.33□□□□□ -1.24
VRK2-208ENST00000463222 RNF19AQ9NV58 838 aa7.33□□□□□ -1.24
VRK2-208ENST00000463222 KLK14Q9P0G3 267 aa7.33□□□□□ -1.24
VRK2-208ENST00000463222 ZIC2O95409 532 aaPredicted RBP7.32□□□□□ -1.24
VRK2-208ENST00000463222 RECKO95980 971 aa7.32□□□□□ -1.24
VRK2-208ENST00000463222 RELBQ01201 579 aa7.32□□□□□ -1.24
VRK2-208ENST00000463222 FMR1Q06787 632 aaKnown RBP eCLIP7.32□□□□□ -1.24
VRK2-208ENST00000463222 DGKZQ13574 1117 aa7.32□□□□□ -1.24
VRK2-208ENST00000463222 C11orf91Q3C1V1 193 aa7.32□□□□□ -1.24
VRK2-208ENST00000463222 FAM161BQ96MY7 647 aa7.32□□□□□ -1.24
VRK2-208ENST00000463222 CITED4Q96RK1 184 aa7.32□□□□□ -1.24
VRK2-208ENST00000463222 NIF3L1Q9GZT8 377 aa7.32□□□□□ -1.24
VRK2-208ENST00000463222 WWC3Q9ULE0 1092 aa7.32□□□□□ -1.24
VRK2-208ENST00000463222 POLIQ9UNA4 740 aa7.32□□□□□ -1.24
VRK2-208ENST00000463222 LDHBP07195 334 aaKnown RBP7.31□□□□□ -1.24
VRK2-208ENST00000463222 DNM1Q05193 864 aaKnown RBP7.31□□□□□ -1.24
VRK2-208ENST00000463222 EHHADHQ08426 723 aa7.31□□□□□ -1.24
VRK2-208ENST00000463222 Q6ZVU0 165 aa7.31□□□□□ -1.24
VRK2-208ENST00000463222 ETFBKMTQ8IXQ9 262 aa7.31□□□□□ -1.24
VRK2-208ENST00000463222 ABTB2Q8N961 1025 aa7.31□□□□□ -1.24
VRK2-208ENST00000463222 EDEM1Q92611 657 aa7.31□□□□□ -1.24
VRK2-208ENST00000463222 ZSCAN10Q96SZ4 725 aaPredicted RBP7.31□□□□□ -1.24
VRK2-208ENST00000463222 SETDB2Q96T68 719 aa7.31□□□□□ -1.24
VRK2-208ENST00000463222 BACH2Q9BYV9 841 aa7.31□□□□□ -1.24
VRK2-208ENST00000463222 PHACTR1Q9C0D0 580 aa7.31□□□□□ -1.24
VRK2-208ENST00000463222 GPR182O15218 404 aa7.3□□□□□ -1.24
VRK2-208ENST00000463222 IGHA2P01877 340 aa7.3□□□□□ -1.24
VRK2-208ENST00000463222 TMEM214Q6NUQ4 689 aaKnown RBP7.3□□□□□ -1.24
VRK2-208ENST00000463222 POTEAQ6S8J7 498 aa7.3□□□□□ -1.24
VRK2-208ENST00000463222 PPARGC1BQ86YN6 1023 aaKnown RBP7.3□□□□□ -1.24
VRK2-208ENST00000463222 ZNF295-AS1Q8N0V1 137 aa7.3□□□□□ -1.24
VRK2-208ENST00000463222 NBPF15Q8N660 670 aa7.3□□□□□ -1.24
VRK2-208ENST00000463222 IFT43Q96FT9 208 aa7.3□□□□□ -1.24
VRK2-208ENST00000463222 DMRTB1Q96MA1 342 aa7.3□□□□□ -1.24
VRK2-208ENST00000463222 FAM129BQ96TA1 746 aa7.3□□□□□ -1.24
VRK2-208ENST00000463222 PARP2Q9UGN5 583 aa7.3□□□□□ -1.24
VRK2-208ENST00000463222 HIRAP54198 1017 aaPredicted RBP7.29□□□□□ -1.24
VRK2-208ENST00000463222 XPCQ01831 940 aaPredicted RBP7.29□□□□□ -1.24
VRK2-208ENST00000463222 RTN1Q16799 776 aa7.29□□□□□ -1.24
VRK2-208ENST00000463222 C9orf131Q5VYM1 1079 aa7.29□□□□□ -1.24
VRK2-208ENST00000463222 DUSP9Q99956 384 aaKnown RBP7.29□□□□□ -1.24
VRK2-208ENST00000463222 BCL11AQ9H165 835 aa7.29□□□□□ -1.24
VRK2-208ENST00000463222 TXLNAP40222 546 aa7.28□□□□□ -1.24
VRK2-208ENST00000463222 ZAP70P43403 619 aa7.28□□□□□ -1.24
VRK2-208ENST00000463222 PDE3BQ13370 1112 aa7.28□□□□□ -1.24
VRK2-208ENST00000463222 MRPL58Q14197 206 aaKnown RBP7.28□□□□□ -1.24
VRK2-208ENST00000463222 NIFKQ9BYG3 293 aaKnown RBP7.28□□□□□ -1.24
VRK2-208ENST00000463222 LOC100996750A0A140TA64 210 aa7.27□□□□□ -1.25
VRK2-208ENST00000463222 MAN1A2O60476 641 aa7.27□□□□□ -1.25
VRK2-208ENST00000463222 PDGFAP04085 211 aa7.27□□□□□ -1.25
VRK2-208ENST00000463222 MZF1P28698 734 aaPredicted RBP7.27□□□□□ -1.25
VRK2-208ENST00000463222 MEIOBQ8N635 442 aa7.27□□□□□ -1.25
VRK2-208ENST00000463222 GPR152Q8TDT2 470 aa7.27□□□□□ -1.25
VRK2-208ENST00000463222 KRTAP4-6Q9BYQ5 205 aa7.27□□□□□ -1.25
VRK2-208ENST00000463222 SOBPA7XYQ1 873 aa7.26□□□□□ -1.25
VRK2-208ENST00000463222 PRPF40AO75400 957 aaKnown RBP7.26□□□□□ -1.25
VRK2-208ENST00000463222 GTF2E1P29083 439 aaPredicted RBP7.26□□□□□ -1.25
VRK2-208ENST00000463222 SLC27A3Q5K4L6 730 aa7.26□□□□□ -1.25
VRK2-208ENST00000463222 LDLRAD1Q5T700 205 aa7.26□□□□□ -1.25
VRK2-208ENST00000463222 TREML1Q86YW5 311 aa7.26□□□□□ -1.25
VRK2-208ENST00000463222 GJD3Q8N144 294 aa7.26□□□□□ -1.25
VRK2-208ENST00000463222 LINC00528Q8N1L1 170 aa7.26□□□□□ -1.25
VRK2-208ENST00000463222 RHBDD1Q8TEB9 315 aa7.26□□□□□ -1.25
VRK2-208ENST00000463222 AIDAQ96BJ3 306 aa7.26□□□□□ -1.25
VRK2-208ENST00000463222 PNMA6FA0A0J9YX94 578 aa7.25□□□□□ -1.25
VRK2-208ENST00000463222 A6NHS1 94 aa7.25□□□□□ -1.25
VRK2-208ENST00000463222 PLA2G4AP47712 749 aa7.25□□□□□ -1.25
VRK2-208ENST00000463222 ATP2B2Q01814 1243 aa7.25□□□□□ -1.25
VRK2-208ENST00000463222 PSMD2Q13200 908 aa7.25□□□□□ -1.25
VRK2-208ENST00000463222 TMEM87AQ8NBN3 555 aa7.25□□□□□ -1.25
VRK2-208ENST00000463222 ALKBH8Q96BT7 664 aaKnown RBP7.25□□□□□ -1.25
VRK2-208ENST00000463222 KLRG1Q96E93 195 aa7.25□□□□□ -1.25
VRK2-208ENST00000463222 GRIP2Q9C0E4 1043 aa7.25□□□□□ -1.25
VRK2-208ENST00000463222 GGNBP2Q9H3C7 697 aa7.25□□□□□ -1.25
VRK2-208ENST00000463222 MRS2Q9HD23 443 aa7.25□□□□□ -1.25
VRK2-208ENST00000463222 BCS1LQ9Y276 419 aa7.25□□□□□ -1.25
VRK2-208ENST00000463222 UPP2O95045 317 aa7.24□□□□□ -1.25
VRK2-208ENST00000463222 PHKA2P46019 1235 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms