RNA–Protein interactions for RNA: ENST00000463053.1

CHKB-202, Transcript of choline kinase beta, humanhuman

TSL 3

Gene CHKB, Length 886 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-202ENST00000463053 CCDC146Q8IYE0 955 aa22.06■■□□□ 1.12
CHKB-202ENST00000463053 ZNF219Q9P2Y4 722 aaPredicted RBP22.06■■□□□ 1.12
CHKB-202ENST00000463053 PDZRN3Q9UPQ7 1066 aa22.06■■□□□ 1.12
CHKB-202ENST00000463053 RRP7AQ9Y3A4 280 aaKnown RBP22.06■■□□□ 1.12
CHKB-202ENST00000463053 LAMB4A4D0S4 1761 aa22.05■■□□□ 1.12
CHKB-202ENST00000463053 TTLL7Q6ZT98 887 aa22.05■■□□□ 1.12
CHKB-202ENST00000463053 NBPF5PQ86XG9 351 aaPredicted RBP22.05■■□□□ 1.12
CHKB-202ENST00000463053 NIP7Q9Y221 180 aaKnown RBP eCLIP22.05■■□□□ 1.12
CHKB-202ENST00000463053 C21orf2O43822 256 aa22.04■■□□□ 1.12
CHKB-202ENST00000463053 SRGNP10124 158 aa22.04■■□□□ 1.12
CHKB-202ENST00000463053 ST5P78524 1137 aa22.04■■□□□ 1.12
CHKB-202ENST00000463053 ZNF652Q9Y2D9 606 aa22.04■■□□□ 1.12
CHKB-202ENST00000463053 FAM177BA6PVY3 158 aa22.03■■□□□ 1.12
CHKB-202ENST00000463053 RGL2O15211 777 aa22.03■■□□□ 1.12
CHKB-202ENST00000463053 NPHP1O15259 732 aa22.03■■□□□ 1.12
CHKB-202ENST00000463053 LMNB1P20700 586 aa22.03■■□□□ 1.12
CHKB-202ENST00000463053 TSPYL4Q9UJ04 414 aa22.03■■□□□ 1.12
CHKB-202ENST00000463053 MYL6BP14649 208 aa22.02■■□□□ 1.12
CHKB-202ENST00000463053 HSPA6P17066 643 aa22.02■■□□□ 1.12
CHKB-202ENST00000463053 STYK1Q6J9G0 422 aa22.02■■□□□ 1.12
CHKB-202ENST00000463053 SLX4Q8IY92 1834 aa22.01■■□□□ 1.11
CHKB-202ENST00000463053 NEUROD2Q15784 382 aa22.01■■□□□ 1.11
CHKB-202ENST00000463053 PRKRIP1Q9H875 184 aaPredicted RBP22.01■■□□□ 1.11
CHKB-202ENST00000463053 RRAGCQ9HB90 399 aa22.01■■□□□ 1.11
CHKB-202ENST00000463053 ADAMTS8Q9UP79 889 aa22.01■■□□□ 1.11
CHKB-202ENST00000463053 CCDC88AQ3V6T2 1871 aa22■■□□□ 1.11
CHKB-202ENST00000463053 KLRG2A4D1S0 409 aaPredicted RBP22■■□□□ 1.11
CHKB-202ENST00000463053 TOMM70O94826 608 aa22■■□□□ 1.11
CHKB-202ENST00000463053 PDIA6Q15084 440 aa22■■□□□ 1.11
CHKB-202ENST00000463053 TPTE2Q6XPS3 522 aa22■■□□□ 1.11
CHKB-202ENST00000463053 LRP10Q7Z4F1 713 aa22■■□□□ 1.11
CHKB-202ENST00000463053 MASTLQ96GX5 879 aa22■■□□□ 1.11
CHKB-202ENST00000463053 TRIM35Q9UPQ4 493 aa22■■□□□ 1.11
CHKB-202ENST00000463053 MAP3K15Q6ZN16 1313 aa22■■□□□ 1.11
CHKB-202ENST00000463053 ERVV-1B6SEH8 477 aa21.99■■□□□ 1.11
CHKB-202ENST00000463053 CNKSR1Q969H4 720 aa21.99■■□□□ 1.11
CHKB-202ENST00000463053 RUNDC1Q96C34 613 aa21.99■■□□□ 1.11
CHKB-202ENST00000463053 EIF2S2P20042 333 aaKnown RBP21.98■■□□□ 1.11
CHKB-202ENST00000463053 PRPF40BQ6NWY9 871 aaKnown RBP21.98■■□□□ 1.11
CHKB-202ENST00000463053 C7orf43Q8WVR3 580 aa21.98■■□□□ 1.11
CHKB-202ENST00000463053 BABAM1Q9NWV8 329 aa21.98■■□□□ 1.11
CHKB-202ENST00000463053 WDR43Q15061 677 aaKnown RBP eCLIP21.97■■□□□ 1.11
CHKB-202ENST00000463053 PROSER3Q2NL68 480 aa21.97■■□□□ 1.11
CHKB-202ENST00000463053 ZBTB3Q9H5J0 574 aa21.97■■□□□ 1.11
CHKB-202ENST00000463053 KDM2BQ8NHM5 1336 aa21.97■■□□□ 1.11
CHKB-202ENST00000463053 NUP98P52948 1817 aa21.96■■□□□ 1.11
CHKB-202ENST00000463053 FER1L6Q2WGJ9 1857 aa21.96■■□□□ 1.11
CHKB-202ENST00000463053 ANXA1P04083 346 aa21.96■■□□□ 1.11
CHKB-202ENST00000463053 LMOD3Q0VAK6 560 aa21.96■■□□□ 1.11
CHKB-202ENST00000463053 KRT24Q2M2I5 525 aa21.96■■□□□ 1.11
CHKB-202ENST00000463053 CACNA1SQ13698 1873 aa21.96■■□□□ 1.11
CHKB-202ENST00000463053 CHL1O00533 1208 aa21.95■■□□□ 1.1
CHKB-202ENST00000463053 NPR1P16066 1061 aa21.95■■□□□ 1.1
CHKB-202ENST00000463053 GPTP24298 496 aa21.95■■□□□ 1.1
CHKB-202ENST00000463053 KIF6Q6ZMV9 814 aa21.95■■□□□ 1.1
CHKB-202ENST00000463053 NUTM1Q86Y26 1132 aa21.95■■□□□ 1.1
CHKB-202ENST00000463053 ERBB4Q15303 1308 aa21.95■■□□□ 1.1
CHKB-202ENST00000463053 UBN2Q6ZU65 1347 aa21.95■■□□□ 1.1
CHKB-202ENST00000463053 ZC3H4Q9UPT8 1303 aaKnown RBP21.95■■□□□ 1.1
CHKB-202ENST00000463053 GLTPD2A6NH11 291 aa21.94■■□□□ 1.1
CHKB-202ENST00000463053 ERFEQ4G0M1 354 aa21.94■■□□□ 1.1
CHKB-202ENST00000463053 SUSD4Q5VX71 490 aa21.94■■□□□ 1.1
CHKB-202ENST00000463053 OLFM4Q6UX06 510 aa21.94■■□□□ 1.1
CHKB-202ENST00000463053 ZNF34Q8IZ26 560 aa21.94■■□□□ 1.1
CHKB-202ENST00000463053 RBM46Q8TBY0 533 aaKnown RBP21.94■■□□□ 1.1
CHKB-202ENST00000463053 ABCC12Q96J65 1359 aa21.94■■□□□ 1.1
CHKB-202ENST00000463053 NECTIN2Q92692 538 aa21.93■■□□□ 1.1
CHKB-202ENST00000463053 LTBP3Q9NS15 1303 aa21.93■■□□□ 1.1
CHKB-202ENST00000463053 GIGYF2Q6Y7W6 1299 aaKnown RBP21.92■■□□□ 1.1
CHKB-202ENST00000463053 TAOK3Q9H2K8 898 aa21.92■■□□□ 1.1
CHKB-202ENST00000463053 LAS1LQ9Y4W2 734 aaKnown RBP21.92■■□□□ 1.1
CHKB-202ENST00000463053 ARFGEF2Q9Y6D5 1785 aa21.92■■□□□ 1.1
CHKB-202ENST00000463053 TNRC6CQ9HCJ0 1690 aaKnown RBP21.91■■□□□ 1.1
CHKB-202ENST00000463053 POTECB2RU33 542 aa21.91■■□□□ 1.1
CHKB-202ENST00000463053 GTF2E1P29083 439 aaPredicted RBP21.91■■□□□ 1.1
CHKB-202ENST00000463053 TIAM2Q8IVF5 1701 aa21.9■■□□□ 1.1
CHKB-202ENST00000463053 C16orf71Q8IYS4 520 aaPredicted RBP21.9■■□□□ 1.1
CHKB-202ENST00000463053 NYXQ9GZU5 481 aa21.9■■□□□ 1.1
CHKB-202ENST00000463053 DICER1Q9UPY3 1922 aaKnown RBP21.9■■□□□ 1.1
CHKB-202ENST00000463053 NTSR2O95665 410 aa21.89■■□□□ 1.09
CHKB-202ENST00000463053 CRY2Q49AN0 593 aa21.89■■□□□ 1.09
CHKB-202ENST00000463053 SOGA3Q5TF21 947 aa21.88■■□□□ 1.09
CHKB-202ENST00000463053 C3orf67Q6ZVT6 689 aa21.88■■□□□ 1.09
CHKB-202ENST00000463053 COPS6Q7L5N1 327 aa21.88■■□□□ 1.09
CHKB-202ENST00000463053 AIMP1Q12904 312 aaKnown RBP21.87■■□□□ 1.09
CHKB-202ENST00000463053 CCDC184Q52MB2 194 aa21.87■■□□□ 1.09
CHKB-202ENST00000463053 CCDC93Q567U6 631 aa21.87■■□□□ 1.09
CHKB-202ENST00000463053 SLC51AQ86UW1 340 aa21.87■■□□□ 1.09
CHKB-202ENST00000463053 XAGE3Q8WTP9 111 aa21.87■■□□□ 1.09
CHKB-202ENST00000463053 APAF1O14727 1248 aa21.86■■□□□ 1.09
CHKB-202ENST00000463053 VEGFAP15692 232 aaPredicted RBP21.86■■□□□ 1.09
CHKB-202ENST00000463053 ALDH1B1P30837 517 aa21.86■■□□□ 1.09
CHKB-202ENST00000463053 APLP1P51693 650 aa21.86■■□□□ 1.09
CHKB-202ENST00000463053 FSTL1Q12841 308 aa21.86■■□□□ 1.09
CHKB-202ENST00000463053 IBTKQ9P2D0 1353 aaPredicted RBP21.86■■□□□ 1.09
CHKB-202ENST00000463053 HTRA3P83110 453 aa21.85■■□□□ 1.09
CHKB-202ENST00000463053 FKBP4Q02790 459 aaKnown RBP eCLIP21.85■■□□□ 1.09
CHKB-202ENST00000463053 DNAJC5GQ8N7S2 189 aa21.85■■□□□ 1.09
CHKB-202ENST00000463053 DDX21Q9NR30 783 aaKnown RBP eCLIP21.85■■□□□ 1.09
CHKB-202ENST00000463053 ZNF277Q9NRM2 450 aaPredicted RBP21.85■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms