RNA–Protein interactions for RNA: ENST00000462658.1

UBE4B-204, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-204ENST00000462658 FHOD3Q2V2M9 1422 aa11.24□□□□□ -0.61
UBE4B-204ENST00000462658 PLA2G4AP47712 749 aa11.23□□□□□ -0.61
UBE4B-204ENST00000462658 ZDHHC1Q8WTX9 485 aa11.23□□□□□ -0.61
UBE4B-204ENST00000462658 CLP1Q92989 425 aaKnown RBP11.23□□□□□ -0.61
UBE4B-204ENST00000462658 PPP1R12BO60237 982 aaPredicted RBP11.22□□□□□ -0.61
UBE4B-204ENST00000462658 WEE1P30291 646 aa11.22□□□□□ -0.61
UBE4B-204ENST00000462658 SAMD9Q5K651 1589 aa11.22□□□□□ -0.61
UBE4B-204ENST00000462658 SH3PXD2AQ5TCZ1 1133 aa11.22□□□□□ -0.61
UBE4B-204ENST00000462658 DISP1Q96F81 1524 aa11.22□□□□□ -0.61
UBE4B-204ENST00000462658 NIFKQ9BYG3 293 aaKnown RBP11.22□□□□□ -0.61
UBE4B-204ENST00000462658 UGGT2Q9NYU1 1516 aa11.22□□□□□ -0.61
UBE4B-204ENST00000462658 USTQ9Y2C2 406 aa11.22□□□□□ -0.61
UBE4B-204ENST00000462658 ADCY10Q96PN6 1610 aa11.21□□□□□ -0.61
UBE4B-204ENST00000462658 OCLNQ16625 522 aa11.21□□□□□ -0.61
UBE4B-204ENST00000462658 ZNF787Q6DD87 383 aa11.21□□□□□ -0.61
UBE4B-204ENST00000462658 ATP2B4P23634 1241 aa11.2□□□□□ -0.62
UBE4B-204ENST00000462658 PTSQ03393 145 aa11.2□□□□□ -0.62
UBE4B-204ENST00000462658 FMN1Q68DA7 1419 aa11.19□□□□□ -0.62
UBE4B-204ENST00000462658 SENP3-EIF4A1A0A087X0R7 540 aa11.19□□□□□ -0.62
UBE4B-204ENST00000462658 IGFBP4P22692 258 aa11.19□□□□□ -0.62
UBE4B-204ENST00000462658 NOS2P35228 1153 aa11.19□□□□□ -0.62
UBE4B-204ENST00000462658 PSMA6P60900 246 aaKnown RBP11.19□□□□□ -0.62
UBE4B-204ENST00000462658 TEAD4Q15561 434 aa11.19□□□□□ -0.62
UBE4B-204ENST00000462658 L3MBTL2Q969R5 705 aa11.19□□□□□ -0.62
UBE4B-204ENST00000462658 TIMMDC1Q9NPL8 285 aa11.19□□□□□ -0.62
UBE4B-204ENST00000462658 ZNF232Q9UNY5 417 aa11.19□□□□□ -0.62
UBE4B-204ENST00000462658 SERTM1A2A2V5 107 aa11.18□□□□□ -0.62
UBE4B-204ENST00000462658 SCNN1AP37088 669 aa11.18□□□□□ -0.62
UBE4B-204ENST00000462658 TRIM26Q12899 539 aaPredicted RBP11.18□□□□□ -0.62
UBE4B-204ENST00000462658 FKBP5Q13451 457 aaPredicted RBP11.18□□□□□ -0.62
UBE4B-204ENST00000462658 AIDAQ96BJ3 306 aa11.18□□□□□ -0.62
UBE4B-204ENST00000462658 CXXC1Q9P0U4 656 aaPredicted RBP11.18□□□□□ -0.62
UBE4B-204ENST00000462658 EML1O00423 815 aa11.17□□□□□ -0.62
UBE4B-204ENST00000462658 C2orf49Q9BVC5 232 aaPredicted RBP11.17□□□□□ -0.62
UBE4B-204ENST00000462658 HCN4Q9Y3Q4 1203 aa11.17□□□□□ -0.62
UBE4B-204ENST00000462658 CARMIL2Q6F5E8 1435 aa11.17□□□□□ -0.62
UBE4B-204ENST00000462658 KIF13AQ9H1H9 1805 aa11.16□□□□□ -0.62
UBE4B-204ENST00000462658 TTBK1Q5TCY1 1321 aaPredicted RBP11.16□□□□□ -0.62
UBE4B-204ENST00000462658 SLC35F4A4IF30 521 aa11.16□□□□□ -0.62
UBE4B-204ENST00000462658 TXLNAP40222 546 aa11.16□□□□□ -0.62
UBE4B-204ENST00000462658 WDR44Q5JSH3 913 aa11.16□□□□□ -0.62
UBE4B-204ENST00000462658 GAS2L1Q99501 681 aaPredicted RBP11.16□□□□□ -0.62
UBE4B-204ENST00000462658 MKNK1Q9BUB5 465 aa11.16□□□□□ -0.62
UBE4B-204ENST00000462658 CASKIN1Q8WXD9 1431 aa11.16□□□□□ -0.62
UBE4B-204ENST00000462658 KIAA0556O60303 1618 aa11.16□□□□□ -0.62
UBE4B-204ENST00000462658 CAPN12Q6ZSI9 719 aa11.15□□□□□ -0.62
UBE4B-204ENST00000462658 GPAMQ9HCL2 828 aa11.15□□□□□ -0.62
UBE4B-204ENST00000462658 CHMP3Q9Y3E7 222 aa11.15□□□□□ -0.62
UBE4B-204ENST00000462658 SSFA2P28290 1259 aa11.14□□□□□ -0.63
UBE4B-204ENST00000462658 PHLDB3Q6NSJ2 640 aa11.14□□□□□ -0.63
UBE4B-204ENST00000462658 CCDC155Q8N6L0 562 aa11.14□□□□□ -0.63
UBE4B-204ENST00000462658 NGLY1Q96IV0 654 aa11.14□□□□□ -0.63
UBE4B-204ENST00000462658 PCGF6Q9BYE7 350 aa11.14□□□□□ -0.63
UBE4B-204ENST00000462658 FYCO1Q9BQS8 1478 aa11.13□□□□□ -0.63
UBE4B-204ENST00000462658 FOXO3O43524 673 aa11.13□□□□□ -0.63
UBE4B-204ENST00000462658 MSX1P28360 303 aa11.13□□□□□ -0.63
UBE4B-204ENST00000462658 STAG2Q8N3U4 1231 aa11.13□□□□□ -0.63
UBE4B-204ENST00000462658 DYRK1BQ9Y463 629 aa11.13□□□□□ -0.63
UBE4B-204ENST00000462658 PCF11O94913 1555 aaKnown RBP11.12□□□□□ -0.63
UBE4B-204ENST00000462658 A0A1B0GTH6 734 aa11.12□□□□□ -0.63
UBE4B-204ENST00000462658 PDE4CQ08493 712 aa11.12□□□□□ -0.63
UBE4B-204ENST00000462658 POTEAQ6S8J7 498 aa11.12□□□□□ -0.63
UBE4B-204ENST00000462658 HOMEZQ8IX15 550 aa11.12□□□□□ -0.63
UBE4B-204ENST00000462658 MAP3K1Q13233 1512 aa11.11□□□□□ -0.63
UBE4B-204ENST00000462658 ATP4AP20648 1035 aa11.11□□□□□ -0.63
UBE4B-204ENST00000462658 VEGFBP49765 207 aa11.11□□□□□ -0.63
UBE4B-204ENST00000462658 NBPF1Q3BBV0 1214 aa11.11□□□□□ -0.63
UBE4B-204ENST00000462658 VTI1AQ96AJ9 217 aa11.11□□□□□ -0.63
UBE4B-204ENST00000462658 PHACTR1Q9C0D0 580 aa11.11□□□□□ -0.63
UBE4B-204ENST00000462658 CUEDC1Q9NWM3 386 aaPredicted RBP11.11□□□□□ -0.63
UBE4B-204ENST00000462658 HIRAP54198 1017 aaPredicted RBP11.1□□□□□ -0.63
UBE4B-204ENST00000462658 RIPOR1Q6ZS17 1223 aa11.1□□□□□ -0.63
UBE4B-204ENST00000462658 ALDH16A1Q8IZ83 802 aa11.1□□□□□ -0.63
UBE4B-204ENST00000462658 KLRG1Q96E93 195 aa11.1□□□□□ -0.63
UBE4B-204ENST00000462658 RUBCNLQ9H714 662 aa11.1□□□□□ -0.63
UBE4B-204ENST00000462658 PPFIA3O75145 1194 aa11.09□□□□□ -0.63
UBE4B-204ENST00000462658 F11P03951 625 aa11.09□□□□□ -0.63
UBE4B-204ENST00000462658 PDIA4P13667 645 aaKnown RBP11.09□□□□□ -0.63
UBE4B-204ENST00000462658 TRAIPQ9BWF2 469 aa11.09□□□□□ -0.63
UBE4B-204ENST00000462658 MAPKBP1O60336 1514 aa11.09□□□□□ -0.63
UBE4B-204ENST00000462658 PTPRGP23470 1445 aa11.09□□□□□ -0.63
UBE4B-204ENST00000462658 TIAM1Q13009 1591 aa11.08□□□□□ -0.64
UBE4B-204ENST00000462658 DIP2BQ9P265 1576 aa11.08□□□□□ -0.64
UBE4B-204ENST00000462658 TATP17735 454 aaPredicted RBP11.08□□□□□ -0.64
UBE4B-204ENST00000462658 NAA30Q147X3 362 aaPredicted RBP11.08□□□□□ -0.64
UBE4B-204ENST00000462658 ZDHHC3Q9NYG2 299 aa11.08□□□□□ -0.64
UBE4B-204ENST00000462658 SEPT3Q9UH03 358 aa11.08□□□□□ -0.64
UBE4B-204ENST00000462658 ABCC2Q92887 1545 aa11.08□□□□□ -0.64
UBE4B-204ENST00000462658 ITGA6P23229 1130 aa11.07□□□□□ -0.64
UBE4B-204ENST00000462658 ARSJQ5FYB0 599 aaPredicted RBP11.07□□□□□ -0.64
UBE4B-204ENST00000462658 C7orf43Q8WVR3 580 aa11.07□□□□□ -0.64
UBE4B-204ENST00000462658 QTRT2Q9H974 415 aaKnown RBP11.07□□□□□ -0.64
UBE4B-204ENST00000462658 UHRF1BP1LA0JNW5 1464 aa11.06□□□□□ -0.64
UBE4B-204ENST00000462658 BICDL1Q6ZP65 573 aa11.06□□□□□ -0.64
UBE4B-204ENST00000462658 C1orf216Q8TAB5 229 aa11.06□□□□□ -0.64
UBE4B-204ENST00000462658 RHPN1Q8TCX5 695 aa11.06□□□□□ -0.64
UBE4B-204ENST00000462658 ZIC5Q96T25 663 aa11.06□□□□□ -0.64
UBE4B-204ENST00000462658 SAP130Q9H0E3 1048 aa11.06□□□□□ -0.64
UBE4B-204ENST00000462658 NXF1Q9UBU9 619 aaKnown RBP11.06□□□□□ -0.64
UBE4B-204ENST00000462658 ABCA8O94911 1581 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms