RNA–Protein interactions for RNA: ENST00000461239.2

ECHDC1-212, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 617 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-212ENST00000461239 ITGBL1O95965 494 aaPredicted RBP11.71□□□□□ -0.53
ECHDC1-212ENST00000461239 PHLDB3Q6NSJ2 640 aa11.71□□□□□ -0.53
ECHDC1-212ENST00000461239 TXNDC2Q86VQ3 553 aa11.71□□□□□ -0.53
ECHDC1-212ENST00000461239 NOD1Q9Y239 953 aa11.71□□□□□ -0.53
ECHDC1-212ENST00000461239 SCAF11Q99590 1463 aaKnown RBP11.7□□□□□ -0.54
ECHDC1-212ENST00000461239 DKK1O94907 266 aa11.7□□□□□ -0.54
ECHDC1-212ENST00000461239 MFAP1P55081 439 aaKnown RBP11.7□□□□□ -0.54
ECHDC1-212ENST00000461239 B4GALNT3Q6L9W6 998 aa11.7□□□□□ -0.54
ECHDC1-212ENST00000461239 TRIM50Q86XT4 487 aa11.7□□□□□ -0.54
ECHDC1-212ENST00000461239 FAM200AQ8TCP9 573 aa11.7□□□□□ -0.54
ECHDC1-212ENST00000461239 CDCA7Q9BWT1 371 aaPredicted RBP11.7□□□□□ -0.54
ECHDC1-212ENST00000461239 GNEQ9Y223 722 aaKnown RBP11.7□□□□□ -0.54
ECHDC1-212ENST00000461239 NPHP4O75161 1426 aaPredicted RBP11.69□□□□□ -0.54
ECHDC1-212ENST00000461239 RIMS2Q9UQ26 1411 aa11.69□□□□□ -0.54
ECHDC1-212ENST00000461239 POLR1AO95602 1720 aaPredicted RBP11.69□□□□□ -0.54
ECHDC1-212ENST00000461239 DPYDQ12882 1025 aa11.69□□□□□ -0.54
ECHDC1-212ENST00000461239 NBPF20Q3BBV1 942 aa11.69□□□□□ -0.54
ECHDC1-212ENST00000461239 PLA2G2CQ5R387 149 aa11.69□□□□□ -0.54
ECHDC1-212ENST00000461239 RNF20Q5VTR2 975 aa11.69□□□□□ -0.54
ECHDC1-212ENST00000461239 DNAAF2Q9NVR5 837 aaKnown RBP11.69□□□□□ -0.54
ECHDC1-212ENST00000461239 KIAA1024Q9UPX6 916 aa11.69□□□□□ -0.54
ECHDC1-212ENST00000461239 SPATA31E1Q6ZUB1 1445 aa11.69□□□□□ -0.54
ECHDC1-212ENST00000461239 RNF223E7ERA6 249 aa11.68□□□□□ -0.54
ECHDC1-212ENST00000461239 ATP1A2P50993 1020 aa11.68□□□□□ -0.54
ECHDC1-212ENST00000461239 KCNC4Q03721 635 aa11.68□□□□□ -0.54
ECHDC1-212ENST00000461239 OXLD1Q5BKU9 147 aa11.68□□□□□ -0.54
ECHDC1-212ENST00000461239 NPM2Q86SE8 214 aaKnown RBP11.68□□□□□ -0.54
ECHDC1-212ENST00000461239 CLP1Q92989 425 aaKnown RBP11.68□□□□□ -0.54
ECHDC1-212ENST00000461239 ZNF594Q96JF6 807 aaPredicted RBP11.68□□□□□ -0.54
ECHDC1-212ENST00000461239 PCGF6Q9BYE7 350 aa11.68□□□□□ -0.54
ECHDC1-212ENST00000461239 CCDC144AA2RUR9 1427 aa11.68□□□□□ -0.54
ECHDC1-212ENST00000461239 DHX57Q6P158 1386 aaKnown RBP11.67□□□□□ -0.54
ECHDC1-212ENST00000461239 ZBTB7BO15156 539 aaPredicted RBP11.67□□□□□ -0.54
ECHDC1-212ENST00000461239 SSFA2P28290 1259 aa11.67□□□□□ -0.54
ECHDC1-212ENST00000461239 TRIM32Q13049 653 aa11.67□□□□□ -0.54
ECHDC1-212ENST00000461239 SIX5Q8N196 739 aa11.67□□□□□ -0.54
ECHDC1-212ENST00000461239 LARGE2Q8N3Y3 721 aa11.67□□□□□ -0.54
ECHDC1-212ENST00000461239 RGS22Q8NE09 1264 aa11.67□□□□□ -0.54
ECHDC1-212ENST00000461239 CDV3Q9UKY7 258 aaKnown RBP11.67□□□□□ -0.54
ECHDC1-212ENST00000461239 NEXMIFQ5QGS0 1516 aa11.66□□□□□ -0.54
ECHDC1-212ENST00000461239 ZNF335Q9H4Z2 1342 aaPredicted RBP11.66□□□□□ -0.54
ECHDC1-212ENST00000461239 IQGAP1P46940 1657 aa11.66□□□□□ -0.54
ECHDC1-212ENST00000461239 GTF2IP78347 998 aa11.66□□□□□ -0.54
ECHDC1-212ENST00000461239 SEPT12Q8IYM1 358 aa11.66□□□□□ -0.54
ECHDC1-212ENST00000461239 ANKLE1Q8NAG6 615 aa11.66□□□□□ -0.54
ECHDC1-212ENST00000461239 EID1Q9Y6B2 187 aa11.66□□□□□ -0.54
ECHDC1-212ENST00000461239 LTBP4Q8N2S1 1624 aa11.65□□□□□ -0.54
ECHDC1-212ENST00000461239 SKOR1P84550 965 aa11.65□□□□□ -0.54
ECHDC1-212ENST00000461239 PLEKHG1Q9ULL1 1385 aa11.65□□□□□ -0.55
ECHDC1-212ENST00000461239 KIF1BO60333 1816 aa11.65□□□□□ -0.55
ECHDC1-212ENST00000461239 ADAMTS13Q76LX8 1427 aa11.64□□□□□ -0.55
ECHDC1-212ENST00000461239 ZBTB24O43167 697 aaPredicted RBP11.64□□□□□ -0.55
ECHDC1-212ENST00000461239 SWI5Q1ZZU3 235 aa11.64□□□□□ -0.55
ECHDC1-212ENST00000461239 RGL3Q3MIN7 710 aa11.64□□□□□ -0.55
ECHDC1-212ENST00000461239 ZNF326Q5BKZ1 582 aaKnown RBP11.64□□□□□ -0.55
ECHDC1-212ENST00000461239 SLC26A8Q96RN1 970 aa11.64□□□□□ -0.55
ECHDC1-212ENST00000461239 PCDHB11Q9Y5F2 797 aa11.64□□□□□ -0.55
ECHDC1-212ENST00000461239 PCDHGA11Q9Y5H2 935 aa11.64□□□□□ -0.55
ECHDC1-212ENST00000461239 SND1Q7KZF4 910 aaKnown RBP eCLIP11.63□□□□□ -0.55
ECHDC1-212ENST00000461239 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.63□□□□□ -0.55
ECHDC1-212ENST00000461239 NRXN3Q9Y4C0 1643 aa11.62□□□□□ -0.55
ECHDC1-212ENST00000461239 WNT7BP56706 349 aa11.62□□□□□ -0.55
ECHDC1-212ENST00000461239 CCDC125Q86Z20 511 aa11.62□□□□□ -0.55
ECHDC1-212ENST00000461239 KCTD15Q96SI1 283 aaPredicted RBP11.62□□□□□ -0.55
ECHDC1-212ENST00000461239 MTMR7Q9Y216 660 aa11.62□□□□□ -0.55
ECHDC1-212ENST00000461239 RPGRIP1LQ68CZ1 1315 aa11.61□□□□□ -0.55
ECHDC1-212ENST00000461239 ADGRF5Q8IZF2 1346 aa11.61□□□□□ -0.55
ECHDC1-212ENST00000461239 VARSP26640 1264 aaKnown RBP11.61□□□□□ -0.55
ECHDC1-212ENST00000461239 SIN3AQ96ST3 1273 aa11.61□□□□□ -0.55
ECHDC1-212ENST00000461239 MAP4K5Q9Y4K4 846 aa11.61□□□□□ -0.55
ECHDC1-212ENST00000461239 STRCP1A6NGW2 1772 aa11.61□□□□□ -0.55
ECHDC1-212ENST00000461239 PPLO60437 1756 aa11.6□□□□□ -0.55
ECHDC1-212ENST00000461239 USP4Q13107 963 aa11.6□□□□□ -0.55
ECHDC1-212ENST00000461239 INTS6LQ5JSJ4 861 aaKnown RBP11.6□□□□□ -0.55
ECHDC1-212ENST00000461239 CCDC102BQ68D86 513 aa11.6□□□□□ -0.55
ECHDC1-212ENST00000461239 SETBP1Q9Y6X0 1596 aa11.59□□□□□ -0.55
ECHDC1-212ENST00000461239 ATP2B4P23634 1241 aa11.59□□□□□ -0.55
ECHDC1-212ENST00000461239 GGCXP38435 758 aa11.59□□□□□ -0.55
ECHDC1-212ENST00000461239 TPCN2Q8NHX9 752 aa11.59□□□□□ -0.55
ECHDC1-212ENST00000461239 SIRT1Q96EB6 747 aa11.59□□□□□ -0.55
ECHDC1-212ENST00000461239 TBX22Q9Y458 520 aa11.59□□□□□ -0.55
ECHDC1-212ENST00000461239 IFT172Q9UG01 1749 aa11.59□□□□□ -0.55
ECHDC1-212ENST00000461239 RPIAP49247 311 aa11.58□□□□□ -0.56
ECHDC1-212ENST00000461239 SEC13P55735 322 aa11.58□□□□□ -0.56
ECHDC1-212ENST00000461239 PPP1R18Q6NYC8 613 aa11.58□□□□□ -0.56
ECHDC1-212ENST00000461239 CCER1Q8TC90 406 aaPredicted RBP11.58□□□□□ -0.56
ECHDC1-212ENST00000461239 PTPRUQ92729 1446 aa11.58□□□□□ -0.56
ECHDC1-212ENST00000461239 METP08581 1390 aa11.57□□□□□ -0.56
ECHDC1-212ENST00000461239 NRXN1Q9ULB1 1477 aa11.57□□□□□ -0.56
ECHDC1-212ENST00000461239 SFI1A8K8P3 1242 aa11.56□□□□□ -0.56
ECHDC1-212ENST00000461239 KCNA6P17658 529 aa11.56□□□□□ -0.56
ECHDC1-212ENST00000461239 ARID4AP29374 1257 aaPredicted RBP11.56□□□□□ -0.56
ECHDC1-212ENST00000461239 SCTRP47872 440 aa11.56□□□□□ -0.56
ECHDC1-212ENST00000461239 RAB15P59190 212 aa11.56□□□□□ -0.56
ECHDC1-212ENST00000461239 OCLNQ16625 522 aa11.56□□□□□ -0.56
ECHDC1-212ENST00000461239 CCDC27Q2M243 656 aa11.56□□□□□ -0.56
ECHDC1-212ENST00000461239 VASH1Q7L8A9 365 aaPredicted RBP11.56□□□□□ -0.56
ECHDC1-212ENST00000461239 C1orf216Q8TAB5 229 aa11.56□□□□□ -0.56
ECHDC1-212ENST00000461239 IRX2Q9BZI1 471 aaPredicted RBP11.56□□□□□ -0.56
ECHDC1-212ENST00000461239 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms