RNA–Protein interactions for RNA: ENST00000459997.1

SRM-202, Transcript of spermidine synthase, humanhuman

TSL 5

Gene SRM, Length 731 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRM-202ENST00000459997 RUNDC1Q96C34 613 aa27.45■■□□□ 1.98
SRM-202ENST00000459997 PDZRN3Q9UPQ7 1066 aa27.45■■□□□ 1.98
SRM-202ENST00000459997 NBPF5PQ86XG9 351 aaPredicted RBP27.44■■□□□ 1.98
SRM-202ENST00000459997 NGEFQ8N5V2 710 aa27.44■■□□□ 1.98
SRM-202ENST00000459997 ADAMTS8Q9UP79 889 aa27.44■■□□□ 1.98
SRM-202ENST00000459997 SENP3-EIF4A1A0A087X0R7 540 aa27.43■■□□□ 1.98
SRM-202ENST00000459997 RGL2O15211 777 aa27.43■■□□□ 1.98
SRM-202ENST00000459997 ZNF622Q969S3 477 aaKnown RBP eCLIP27.43■■□□□ 1.98
SRM-202ENST00000459997 RNF181Q9P0P0 153 aa27.42■■□□□ 1.98
SRM-202ENST00000459997 NIP7Q9Y221 180 aaKnown RBP eCLIP27.42■■□□□ 1.98
SRM-202ENST00000459997 MYL6BP14649 208 aa27.41■■□□□ 1.98
SRM-202ENST00000459997 HLFQ16534 295 aa27.41■■□□□ 1.98
SRM-202ENST00000459997 BABAM1Q9NWV8 329 aa27.41■■□□□ 1.98
SRM-202ENST00000459997 SBF1O95248 1867 aa27.4■■□□□ 1.98
SRM-202ENST00000459997 RASSF7Q02833 373 aa27.4■■□□□ 1.98
SRM-202ENST00000459997 KIF6Q6ZMV9 814 aa27.38■■□□□ 1.97
SRM-202ENST00000459997 FAM177BA6PVY3 158 aa27.37■■□□□ 1.97
SRM-202ENST00000459997 TPTE2Q6XPS3 522 aa27.37■■□□□ 1.97
SRM-202ENST00000459997 TTLL7Q6ZT98 887 aa27.37■■□□□ 1.97
SRM-202ENST00000459997 TRIM35Q9UPQ4 493 aa27.37■■□□□ 1.97
SRM-202ENST00000459997 ERBB4Q15303 1308 aa27.37■■□□□ 1.97
SRM-202ENST00000459997 MAP3K15Q6ZN16 1313 aa27.37■■□□□ 1.97
SRM-202ENST00000459997 ERVV-1B6SEH8 477 aa27.36■■□□□ 1.97
SRM-202ENST00000459997 KIF3CO14782 793 aa27.36■■□□□ 1.97
SRM-202ENST00000459997 NUP98P52948 1817 aa27.36■■□□□ 1.97
SRM-202ENST00000459997 CACNA1SQ13698 1873 aa27.36■■□□□ 1.97
SRM-202ENST00000459997 SRGNP10124 158 aa27.35■■□□□ 1.97
SRM-202ENST00000459997 EIF2S2P20042 333 aaKnown RBP27.35■■□□□ 1.97
SRM-202ENST00000459997 STYK1Q6J9G0 422 aa27.35■■□□□ 1.97
SRM-202ENST00000459997 ZNF219Q9P2Y4 722 aaPredicted RBP27.35■■□□□ 1.97
SRM-202ENST00000459997 CNKSR1Q969H4 720 aa27.34■■□□□ 1.97
SRM-202ENST00000459997 ZBTB3Q9H5J0 574 aa27.34■■□□□ 1.97
SRM-202ENST00000459997 LAS1LQ9Y4W2 734 aaKnown RBP27.34■■□□□ 1.97
SRM-202ENST00000459997 ARFGEF2Q9Y6D5 1785 aa27.33■■□□□ 1.97
SRM-202ENST00000459997 C21orf2O43822 256 aa27.33■■□□□ 1.97
SRM-202ENST00000459997 LMNB1P20700 586 aa27.33■■□□□ 1.97
SRM-202ENST00000459997 MASTLQ96GX5 879 aa27.33■■□□□ 1.97
SRM-202ENST00000459997 NMRK2Q9NPI5 230 aa27.33■■□□□ 1.97
SRM-202ENST00000459997 NFKBIEO00221 500 aa27.32■■□□□ 1.96
SRM-202ENST00000459997 CHL1O00533 1208 aa27.32■■□□□ 1.96
SRM-202ENST00000459997 GTF2E1P29083 439 aaPredicted RBP27.31■■□□□ 1.96
SRM-202ENST00000459997 PRELPP51888 382 aa27.31■■□□□ 1.96
SRM-202ENST00000459997 PRPF40BQ6NWY9 871 aaKnown RBP27.31■■□□□ 1.96
SRM-202ENST00000459997 SLX4Q8IY92 1834 aa27.31■■□□□ 1.96
SRM-202ENST00000459997 TIAM2Q8IVF5 1701 aa27.3■■□□□ 1.96
SRM-202ENST00000459997 PDIA6Q15084 440 aa27.3■■□□□ 1.96
SRM-202ENST00000459997 KDM2BQ8NHM5 1336 aa27.3■■□□□ 1.96
SRM-202ENST00000459997 CCDC88AQ3V6T2 1871 aa27.3■■□□□ 1.96
SRM-202ENST00000459997 NPR1P16066 1061 aa27.29■■□□□ 1.96
SRM-202ENST00000459997 GPTP24298 496 aa27.29■■□□□ 1.96
SRM-202ENST00000459997 PROSER3Q2NL68 480 aa27.29■■□□□ 1.96
SRM-202ENST00000459997 NECTIN2Q92692 538 aa27.29■■□□□ 1.96
SRM-202ENST00000459997 NYXQ9GZU5 481 aa27.29■■□□□ 1.96
SRM-202ENST00000459997 FER1L6Q2WGJ9 1857 aa27.29■■□□□ 1.96
SRM-202ENST00000459997 TNRC6CQ9HCJ0 1690 aaKnown RBP27.28■■□□□ 1.96
SRM-202ENST00000459997 ZC3H4Q9UPT8 1303 aaKnown RBP27.28■■□□□ 1.96
SRM-202ENST00000459997 KLRG2A4D1S0 409 aaPredicted RBP27.28■■□□□ 1.96
SRM-202ENST00000459997 ANXA1P04083 346 aa27.28■■□□□ 1.96
SRM-202ENST00000459997 KRT24Q2M2I5 525 aa27.28■■□□□ 1.96
SRM-202ENST00000459997 LRP10Q7Z4F1 713 aa27.28■■□□□ 1.96
SRM-202ENST00000459997 UBN2Q6ZU65 1347 aa27.27■■□□□ 1.96
SRM-202ENST00000459997 ABCC12Q96J65 1359 aa27.26■■□□□ 1.95
SRM-202ENST00000459997 APAF1O14727 1248 aa27.26■■□□□ 1.95
SRM-202ENST00000459997 GIGYF2Q6Y7W6 1299 aaKnown RBP27.26■■□□□ 1.95
SRM-202ENST00000459997 NUTM1Q86Y26 1132 aa27.26■■□□□ 1.95
SRM-202ENST00000459997 SOGA3Q5TF21 947 aa27.25■■□□□ 1.95
SRM-202ENST00000459997 IBTKQ9P2D0 1353 aaPredicted RBP27.24■■□□□ 1.95
SRM-202ENST00000459997 ZNF316A6NFI3 1004 aaPredicted RBP27.24■■□□□ 1.95
SRM-202ENST00000459997 TOMM70O94826 608 aa27.24■■□□□ 1.95
SRM-202ENST00000459997 ERFEQ4G0M1 354 aa27.24■■□□□ 1.95
SRM-202ENST00000459997 ZNF34Q8IZ26 560 aa27.24■■□□□ 1.95
SRM-202ENST00000459997 CFAP44Q96MT7 982 aa27.24■■□□□ 1.95
SRM-202ENST00000459997 SUSD4Q5VX71 490 aa27.23■■□□□ 1.95
SRM-202ENST00000459997 TAOK3Q9H2K8 898 aa27.23■■□□□ 1.95
SRM-202ENST00000459997 LTBP3Q9NS15 1303 aa27.22■■□□□ 1.95
SRM-202ENST00000459997 HSPA6P17066 643 aa27.22■■□□□ 1.95
SRM-202ENST00000459997 C16orf71Q8IYS4 520 aaPredicted RBP27.22■■□□□ 1.95
SRM-202ENST00000459997 AIMP1Q12904 312 aaKnown RBP27.21■■□□□ 1.95
SRM-202ENST00000459997 COPS6Q7L5N1 327 aa27.21■■□□□ 1.95
SRM-202ENST00000459997 XAGE3Q8WTP9 111 aa27.21■■□□□ 1.95
SRM-202ENST00000459997 RRAGCQ9HB90 399 aa27.21■■□□□ 1.95
SRM-202ENST00000459997 DDX21Q9NR30 783 aaKnown RBP eCLIP27.21■■□□□ 1.95
SRM-202ENST00000459997 DICER1Q9UPY3 1922 aaKnown RBP27.2■■□□□ 1.95
SRM-202ENST00000459997 RIC1Q4ADV7 1423 aa27.2■■□□□ 1.94
SRM-202ENST00000459997 CCDC184Q52MB2 194 aa27.2■■□□□ 1.94
SRM-202ENST00000459997 HDGFL1Q5TGJ6 251 aa27.2■■□□□ 1.94
SRM-202ENST00000459997 C7orf43Q8WVR3 580 aa27.2■■□□□ 1.94
SRM-202ENST00000459997 MBIPQ9NS73 344 aa27.2■■□□□ 1.94
SRM-202ENST00000459997 ANKRD36CQ5JPF3 1778 aa27.2■■□□□ 1.94
SRM-202ENST00000459997 GLTPD2A6NH11 291 aa27.19■■□□□ 1.94
SRM-202ENST00000459997 NTSR2O95665 410 aa27.19■■□□□ 1.94
SRM-202ENST00000459997 HOXB7P09629 217 aa27.19■■□□□ 1.94
SRM-202ENST00000459997 ALDH1B1P30837 517 aa27.19■■□□□ 1.94
SRM-202ENST00000459997 CRY2Q49AN0 593 aa27.19■■□□□ 1.94
SRM-202ENST00000459997 PARP10Q53GL7 1025 aa27.19■■□□□ 1.94
SRM-202ENST00000459997 CCDC93Q567U6 631 aa27.19■■□□□ 1.94
SRM-202ENST00000459997 PPP1R42Q7Z4L9 355 aa27.19■■□□□ 1.94
SRM-202ENST00000459997 CHPF2Q9P2E5 772 aa27.19■■□□□ 1.94
SRM-202ENST00000459997 CALD1Q05682 793 aaKnown RBP27.18■■□□□ 1.94
SRM-202ENST00000459997 CEP350Q5VT06 3117 aa27.17■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms