RNA–Protein interactions for RNA: ENST00000459902.1

CKAP2-204, Transcript of cytoskeleton associated protein 2, humanhuman

TSL 2

Gene CKAP2, Length 798 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-204ENST00000459902 TRIM22Q8IYM9 498 aa11.46□□□□□ -0.57
CKAP2-204ENST00000459902 ZNF280CQ8ND82 737 aa11.46□□□□□ -0.57
CKAP2-204ENST00000459902 SUSD3Q96L08 255 aa11.46□□□□□ -0.57
CKAP2-204ENST00000459902 NXF1Q9UBU9 619 aaKnown RBP11.46□□□□□ -0.57
CKAP2-204ENST00000459902 BCS1LQ9Y276 419 aa11.46□□□□□ -0.57
CKAP2-204ENST00000459902 H7C1W4 665 aa11.45□□□□□ -0.58
CKAP2-204ENST00000459902 LRRC69Q6ZNQ3 347 aa11.45□□□□□ -0.58
CKAP2-204ENST00000459902 HELQQ8TDG4 1101 aa11.45□□□□□ -0.58
CKAP2-204ENST00000459902 ANO2Q9NQ90 1003 aa11.45□□□□□ -0.58
CKAP2-204ENST00000459902 PATL2C9JE40 543 aaKnown RBP11.44□□□□□ -0.58
CKAP2-204ENST00000459902 VEGFBP49765 207 aa11.44□□□□□ -0.58
CKAP2-204ENST00000459902 ZNF211Q13398 564 aaPredicted RBP11.44□□□□□ -0.58
CKAP2-204ENST00000459902 MTMR3Q13615 1198 aa11.44□□□□□ -0.58
CKAP2-204ENST00000459902 EFHC2Q5JST6 749 aa11.44□□□□□ -0.58
CKAP2-204ENST00000459902 NLRP8Q86W28 1048 aa11.44□□□□□ -0.58
CKAP2-204ENST00000459902 HSH2DQ96JZ2 352 aa11.44□□□□□ -0.58
CKAP2-204ENST00000459902 NUCKS1Q9H1E3 243 aaKnown RBP11.44□□□□□ -0.58
CKAP2-204ENST00000459902 NEUROD4Q9HD90 331 aa11.44□□□□□ -0.58
CKAP2-204ENST00000459902 LBRQ14739 615 aaKnown RBP11.43□□□□□ -0.58
CKAP2-204ENST00000459902 FAM26DQ5JW98 314 aa11.43□□□□□ -0.58
CKAP2-204ENST00000459902 ZNF837Q96EG3 531 aaPredicted RBP11.43□□□□□ -0.58
CKAP2-204ENST00000459902 IFT43Q96FT9 208 aa11.43□□□□□ -0.58
CKAP2-204ENST00000459902 ANKIB1Q9P2G1 1089 aa11.43□□□□□ -0.58
CKAP2-204ENST00000459902 EGFL7Q9UHF1 273 aa11.43□□□□□ -0.58
CKAP2-204ENST00000459902 GJA3Q9Y6H8 435 aa11.43□□□□□ -0.58
CKAP2-204ENST00000459902 FKBP4Q02790 459 aaKnown RBP eCLIP11.42□□□□□ -0.58
CKAP2-204ENST00000459902 UBAP2LQ14157 1087 aaKnown RBP11.42□□□□□ -0.58
CKAP2-204ENST00000459902 GMCL1Q96IK5 515 aa11.42□□□□□ -0.58
CKAP2-204ENST00000459902 ZCCHC2Q9C0B9 1178 aaKnown RBP11.42□□□□□ -0.58
CKAP2-204ENST00000459902 STIM2Q9P246 746 aa11.42□□□□□ -0.58
CKAP2-204ENST00000459902 ICMTO60725 284 aa11.41□□□□□ -0.58
CKAP2-204ENST00000459902 BRD2P25440 801 aaKnown RBP11.41□□□□□ -0.58
CKAP2-204ENST00000459902 HIF1AQ16665 826 aa11.41□□□□□ -0.58
CKAP2-204ENST00000459902 VWA5B2Q8N398 1253 aa11.41□□□□□ -0.58
CKAP2-204ENST00000459902 TGFBR3LH3BV60 316 aa11.4□□□□□ -0.58
CKAP2-204ENST00000459902 SF3B2Q13435 895 aaKnown RBP11.4□□□□□ -0.58
CKAP2-204ENST00000459902 NPAS3Q8IXF0 933 aa11.4□□□□□ -0.58
CKAP2-204ENST00000459902 ETFBKMTQ8IXQ9 262 aa11.4□□□□□ -0.58
CKAP2-204ENST00000459902 NANOS1Q8WY41 292 aaKnown RBP11.4□□□□□ -0.58
CKAP2-204ENST00000459902 DMGDHQ9UI17 866 aaKnown RBP11.4□□□□□ -0.58
CKAP2-204ENST00000459902 CDC14CA4D256 554 aa11.39□□□□□ -0.59
CKAP2-204ENST00000459902 H3BM21 787 aa11.39□□□□□ -0.59
CKAP2-204ENST00000459902 ZBTB39O15060 712 aa11.39□□□□□ -0.59
CKAP2-204ENST00000459902 GTPBP3Q969Y2 492 aaKnown RBP11.39□□□□□ -0.59
CKAP2-204ENST00000459902 SOWAHDA6NJG2 315 aa11.38□□□□□ -0.59
CKAP2-204ENST00000459902 TERTO14746 1132 aaKnown RBP11.38□□□□□ -0.59
CKAP2-204ENST00000459902 MICAL2O94851 1124 aa11.38□□□□□ -0.59
CKAP2-204ENST00000459902 NPR3P17342 541 aa11.38□□□□□ -0.59
CKAP2-204ENST00000459902 TRIM26Q12899 539 aaPredicted RBP11.38□□□□□ -0.59
CKAP2-204ENST00000459902 ECM1Q16610 540 aa11.38□□□□□ -0.59
CKAP2-204ENST00000459902 SAMD5Q5TGI4 173 aa11.38□□□□□ -0.59
CKAP2-204ENST00000459902 IER5Q5VY09 327 aa11.38□□□□□ -0.59
CKAP2-204ENST00000459902 SV2AQ7L0J3 742 aa11.38□□□□□ -0.59
CKAP2-204ENST00000459902 BTLAQ7Z6A9 289 aa11.38□□□□□ -0.59
CKAP2-204ENST00000459902 H3BRB1 525 aa11.37□□□□□ -0.59
CKAP2-204ENST00000459902 ATXN7O15265 892 aaPredicted RBP11.37□□□□□ -0.59
CKAP2-204ENST00000459902 MPSTP25325 297 aa11.37□□□□□ -0.59
CKAP2-204ENST00000459902 FIGNL1Q6PIW4 674 aa11.37□□□□□ -0.59
CKAP2-204ENST00000459902 TREML1Q86YW5 311 aa11.37□□□□□ -0.59
CKAP2-204ENST00000459902 TUT1Q9H6E5 874 aaKnown RBP11.37□□□□□ -0.59
CKAP2-204ENST00000459902 PCDHGC4Q9Y5F7 938 aa11.37□□□□□ -0.59
CKAP2-204ENST00000459902 ZBTB7CA1YPR0 619 aa11.36□□□□□ -0.59
CKAP2-204ENST00000459902 BNIP3LO60238 219 aa11.36□□□□□ -0.59
CKAP2-204ENST00000459902 NDFIP2Q9NV92 336 aa11.36□□□□□ -0.59
CKAP2-204ENST00000459902 GLYCTKQ8IVS8 523 aa11.35□□□□□ -0.59
CKAP2-204ENST00000459902 ABTB2Q8N961 1025 aa11.35□□□□□ -0.59
CKAP2-204ENST00000459902 CEP63Q96MT8 703 aa11.35□□□□□ -0.59
CKAP2-204ENST00000459902 GPR25O00155 361 aa11.34□□□□□ -0.59
CKAP2-204ENST00000459902 OPLAHO14841 1288 aa11.34□□□□□ -0.59
CKAP2-204ENST00000459902 FAM13AO94988 1023 aa11.34□□□□□ -0.59
CKAP2-204ENST00000459902 IDH3AP50213 366 aa11.34□□□□□ -0.59
CKAP2-204ENST00000459902 TYRO3Q06418 890 aa11.34□□□□□ -0.59
CKAP2-204ENST00000459902 GPR161Q8N6U8 529 aaKnown RBP11.34□□□□□ -0.59
CKAP2-204ENST00000459902 GZF1Q9H116 711 aaPredicted RBP11.34□□□□□ -0.59
CKAP2-204ENST00000459902 HCN2Q9UL51 889 aa11.34□□□□□ -0.59
CKAP2-204ENST00000459902 DCDC2BA2VCK2 349 aa11.33□□□□□ -0.6
CKAP2-204ENST00000459902 KHNYNO15037 678 aaKnown RBP11.33□□□□□ -0.6
CKAP2-204ENST00000459902 FAM157BP0CG42 384 aa11.33□□□□□ -0.6
CKAP2-204ENST00000459902 INPP5BP32019 993 aa11.33□□□□□ -0.6
CKAP2-204ENST00000459902 EIF1AXP47813 144 aaKnown RBP11.33□□□□□ -0.6
CKAP2-204ENST00000459902 TNP2Q05952 138 aa11.33□□□□□ -0.6
CKAP2-204ENST00000459902 NOM1Q5C9Z4 860 aaKnown RBP11.33□□□□□ -0.6
CKAP2-204ENST00000459902 ABHD17AQ96GS6 310 aa11.33□□□□□ -0.6
CKAP2-204ENST00000459902 EFSO43281 561 aa11.32□□□□□ -0.6
CKAP2-204ENST00000459902 MAPTP10636 758 aaKnown RBP11.32□□□□□ -0.6
CKAP2-204ENST00000459902 ZAP70P43403 619 aa11.32□□□□□ -0.6
CKAP2-204ENST00000459902 FOXR1Q6PIV2 292 aa11.32□□□□□ -0.6
CKAP2-204ENST00000459902 ATCAYQ86WG3 371 aa11.32□□□□□ -0.6
CKAP2-204ENST00000459902 SLC16A10Q8TF71 515 aa11.32□□□□□ -0.6
CKAP2-204ENST00000459902 CFHR5Q9BXR6 569 aa11.32□□□□□ -0.6
CKAP2-204ENST00000459902 BRD7Q9NPI1 651 aa11.32□□□□□ -0.6
CKAP2-204ENST00000459902 ERBB4Q15303 1308 aa11.32□□□□□ -0.6
CKAP2-204ENST00000459902 ARHGAP4P98171 946 aa11.31□□□□□ -0.6
CKAP2-204ENST00000459902 NFX1Q12986 1120 aaKnown RBP11.31□□□□□ -0.6
CKAP2-204ENST00000459902 TRERF1Q96PN7 1200 aa11.31□□□□□ -0.6
CKAP2-204ENST00000459902 VSIG8P0DPA2 414 aa11.3□□□□□ -0.6
CKAP2-204ENST00000459902 GRNP28799 593 aaKnown RBP11.3□□□□□ -0.6
CKAP2-204ENST00000459902 ARSDP51689 593 aa11.3□□□□□ -0.6
CKAP2-204ENST00000459902 SFSWAPQ12872 951 aaKnown RBP11.3□□□□□ -0.6
CKAP2-204ENST00000459902 ALKBH2Q6NS38 261 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms