RNA–Protein interactions for RNA: ENST00000459877.1

KCNC4-205, Transcript of potassium voltage-gated channel subfamily C member 4, humanhuman

TSL 1 (best)

Gene KCNC4, Length 7,597 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNC4-205ENST00000459877 PTPN14Q15678 1187 aa10.6□□□□□ -0.71
KCNC4-205ENST00000459877 CCDC40Q4G0X9 1142 aa10.6□□□□□ -0.71
KCNC4-205ENST00000459877 ATP5J2-PTCD1G3V325 749 aa10.6□□□□□ -0.71
KCNC4-205ENST00000459877 TMPOP42166 694 aaKnown RBP10.6□□□□□ -0.71
KCNC4-205ENST00000459877 UBXN4Q92575 508 aa10.6□□□□□ -0.71
KCNC4-205ENST00000459877 TRERF1Q96PN7 1200 aa10.6□□□□□ -0.71
KCNC4-205ENST00000459877 NAIPQ13075 1403 aa10.59□□□□□ -0.71
KCNC4-205ENST00000459877 PICALMQ13492 652 aa10.59□□□□□ -0.71
KCNC4-205ENST00000459877 HLTFQ14527 1009 aaKnown RBP eCLIP10.59□□□□□ -0.71
KCNC4-205ENST00000459877 OTUD6BQ8N6M0 293 aa10.59□□□□□ -0.71
KCNC4-205ENST00000459877 CALML4Q96GE6 196 aa10.59□□□□□ -0.71
KCNC4-205ENST00000459877 PAIP2Q9BPZ3 127 aaKnown RBP10.59□□□□□ -0.71
KCNC4-205ENST00000459877 KAT14Q9H8E8 782 aa10.59□□□□□ -0.71
KCNC4-205ENST00000459877 RFC4P35249 363 aa10.59□□□□□ -0.71
KCNC4-205ENST00000459877 APBB1IPQ7Z5R6 666 aaPredicted RBP10.59□□□□□ -0.71
KCNC4-205ENST00000459877 SYNCQ9H7C4 482 aa10.59□□□□□ -0.71
KCNC4-205ENST00000459877 RAB11FIP3O75154 756 aa10.59□□□□□ -0.71
KCNC4-205ENST00000459877 TMEM67Q5HYA8 995 aa10.59□□□□□ -0.71
KCNC4-205ENST00000459877 FAM212AQ96EL1 285 aa10.59□□□□□ -0.71
KCNC4-205ENST00000459877 DDX23Q9BUQ8 820 aaKnown RBP10.59□□□□□ -0.71
KCNC4-205ENST00000459877 SNRKQ9NRH2 765 aa10.59□□□□□ -0.71
KCNC4-205ENST00000459877 FGFR1OPO95684 399 aaKnown RBP10.59□□□□□ -0.71
KCNC4-205ENST00000459877 TMC6Q7Z403 805 aa10.59□□□□□ -0.71
KCNC4-205ENST00000459877 MAP3K9P80192 1104 aa10.59□□□□□ -0.71
KCNC4-205ENST00000459877 PDCL2Q8N4E4 241 aa10.58□□□□□ -0.72
KCNC4-205ENST00000459877 MYO1BO43795 1136 aa10.58□□□□□ -0.72
KCNC4-205ENST00000459877 GJC1P36383 396 aa10.58□□□□□ -0.72
KCNC4-205ENST00000459877 AKNAD1Q5T1N1 836 aa10.58□□□□□ -0.72
KCNC4-205ENST00000459877 TSPY2A6NKD2 308 aa10.58□□□□□ -0.72
KCNC4-205ENST00000459877 MAATS1Q7Z4T9 603 aa10.58□□□□□ -0.72
KCNC4-205ENST00000459877 SLC26A6Q9BXS9 759 aa10.58□□□□□ -0.72
KCNC4-205ENST00000459877 RAB34Q9BZG1 259 aa10.58□□□□□ -0.72
KCNC4-205ENST00000459877 GDPD2Q9HCC8 539 aa10.58□□□□□ -0.72
KCNC4-205ENST00000459877 ST5P78524 1137 aa10.58□□□□□ -0.72
KCNC4-205ENST00000459877 GJB2P29033 226 aa10.58□□□□□ -0.72
KCNC4-205ENST00000459877 CCDC183Q5T5S1 534 aa10.58□□□□□ -0.72
KCNC4-205ENST00000459877 GIGYF2Q6Y7W6 1299 aaKnown RBP10.58□□□□□ -0.72
KCNC4-205ENST00000459877 ANO10Q9NW15 660 aa10.58□□□□□ -0.72
KCNC4-205ENST00000459877 SFPQP23246 707 aaKnown RBP eCLIP10.58□□□□□ -0.72
KCNC4-205ENST00000459877 SLF2Q8IX21 1173 aa10.58□□□□□ -0.72
KCNC4-205ENST00000459877 FAM135AQ9P2D6 1515 aa10.57□□□□□ -0.72
KCNC4-205ENST00000459877 RBM25P49756 843 aaKnown RBP10.57□□□□□ -0.72
KCNC4-205ENST00000459877 HSP90AA4PQ58FG1 418 aa10.57□□□□□ -0.72
KCNC4-205ENST00000459877 FSIP1Q8NA03 581 aa10.57□□□□□ -0.72
KCNC4-205ENST00000459877 ZSCAN12O43309 604 aa10.57□□□□□ -0.72
KCNC4-205ENST00000459877 SSX2IPQ9Y2D8 614 aa10.57□□□□□ -0.72
KCNC4-205ENST00000459877 TSNARE1Q96NA8 513 aa10.57□□□□□ -0.72
KCNC4-205ENST00000459877 USO1O60763 962 aaKnown RBP10.57□□□□□ -0.72
KCNC4-205ENST00000459877 ATP2C2O75185 946 aa10.57□□□□□ -0.72
KCNC4-205ENST00000459877 YEATS4O95619 227 aa10.57□□□□□ -0.72
KCNC4-205ENST00000459877 IDEP14735 1019 aa10.57□□□□□ -0.72
KCNC4-205ENST00000459877 FERP16591 822 aa10.57□□□□□ -0.72
KCNC4-205ENST00000459877 NME9Q86XW9 330 aa10.57□□□□□ -0.72
KCNC4-205ENST00000459877 EHBP1L1Q8N3D4 1523 aa10.57□□□□□ -0.72
KCNC4-205ENST00000459877 MAP9Q49MG5 647 aa10.57□□□□□ -0.72
KCNC4-205ENST00000459877 TFIP11Q9UBB9 837 aaKnown RBP10.57□□□□□ -0.72
KCNC4-205ENST00000459877 DDX46Q7L014 1031 aaKnown RBP10.56□□□□□ -0.72
KCNC4-205ENST00000459877 KCNH5Q8NCM2 988 aa10.56□□□□□ -0.72
KCNC4-205ENST00000459877 CCDC196A0A1B0GTZ2 297 aa10.56□□□□□ -0.72
KCNC4-205ENST00000459877 MICU3Q86XE3 530 aa10.56□□□□□ -0.72
KCNC4-205ENST00000459877 PHAXQ9H814 394 aaKnown RBP10.56□□□□□ -0.72
KCNC4-205ENST00000459877 JADE2Q9NQC1 790 aa10.56□□□□□ -0.72
KCNC4-205ENST00000459877 RBM26Q5T8P6 1007 aaKnown RBP10.56□□□□□ -0.72
KCNC4-205ENST00000459877 PPM1EQ8WY54 764 aa10.56□□□□□ -0.72
KCNC4-205ENST00000459877 C16orf45Q96MC5 204 aaPredicted RBP10.56□□□□□ -0.72
KCNC4-205ENST00000459877 CABP5Q9NP86 173 aa10.56□□□□□ -0.72
KCNC4-205ENST00000459877 RBM27Q9P2N5 1060 aaKnown RBP10.56□□□□□ -0.72
KCNC4-205ENST00000459877 IQSEC3Q9UPP2 1182 aaPredicted RBP10.56□□□□□ -0.72
KCNC4-205ENST00000459877 SPECC1Q5M775 1068 aa10.56□□□□□ -0.72
KCNC4-205ENST00000459877 CTR9Q6PD62 1173 aa10.56□□□□□ -0.72
KCNC4-205ENST00000459877 PPP1R14CQ8TAE6 165 aa10.56□□□□□ -0.72
KCNC4-205ENST00000459877 ZSWIM4Q9H7M6 989 aa10.56□□□□□ -0.72
KCNC4-205ENST00000459877 C16orf71Q8IYS4 520 aaPredicted RBP10.56□□□□□ -0.72
KCNC4-205ENST00000459877 EPRSP07814 1512 aaKnown RBP10.55□□□□□ -0.72
KCNC4-205ENST00000459877 GLRX3O76003 335 aaKnown RBP10.55□□□□□ -0.72
KCNC4-205ENST00000459877 TSPY3P0CV98 308 aa10.55□□□□□ -0.72
KCNC4-205ENST00000459877 TSPY8P0CW00 308 aa10.55□□□□□ -0.72
KCNC4-205ENST00000459877 ALS2CR12Q96Q35 445 aa10.55□□□□□ -0.72
KCNC4-205ENST00000459877 BACH2Q9BYV9 841 aa10.55□□□□□ -0.72
KCNC4-205ENST00000459877 FAM107BQ9H098 131 aa10.55□□□□□ -0.72
KCNC4-205ENST00000459877 ZBTB21Q9ULJ3 1066 aa10.55□□□□□ -0.72
KCNC4-205ENST00000459877 AFMP43652 599 aa10.55□□□□□ -0.72
KCNC4-205ENST00000459877 HEATR3Q7Z4Q2 680 aa10.55□□□□□ -0.72
KCNC4-205ENST00000459877 FCHSD2O94868 740 aa10.55□□□□□ -0.72
KCNC4-205ENST00000459877 CALM1P0DP23 149 aa10.55□□□□□ -0.72
KCNC4-205ENST00000459877 CALM2P0DP24 149 aa10.55□□□□□ -0.72
KCNC4-205ENST00000459877 CALM3P0DP25 149 aa10.55□□□□□ -0.72
KCNC4-205ENST00000459877 CCDC184Q52MB2 194 aa10.55□□□□□ -0.72
KCNC4-205ENST00000459877 MFSD6Q6ZSS7 791 aa10.55□□□□□ -0.72
KCNC4-205ENST00000459877 EXOC1Q9NV70 894 aa10.55□□□□□ -0.72
KCNC4-205ENST00000459877 CASKIN1Q8WXD9 1431 aa10.55□□□□□ -0.72
KCNC4-205ENST00000459877 KIAA1107Q9UPP5 1409 aa10.55□□□□□ -0.72
KCNC4-205ENST00000459877 A0A1W2PRG0 241 aa10.55□□□□□ -0.72
KCNC4-205ENST00000459877 EXOC5O00471 708 aa10.55□□□□□ -0.72
KCNC4-205ENST00000459877 HLA-DOAP06340 250 aa10.55□□□□□ -0.72
KCNC4-205ENST00000459877 SSFA2P28290 1259 aa10.55□□□□□ -0.72
KCNC4-205ENST00000459877 METAP2P50579 478 aaKnown RBP eCLIP10.55□□□□□ -0.72
KCNC4-205ENST00000459877 WDR97A6NE52 1622 aa10.54□□□□□ -0.72
KCNC4-205ENST00000459877 NBPF8Q3BBV2 869 aa10.54□□□□□ -0.72
KCNC4-205ENST00000459877 PROCA1Q8NCQ7 364 aaPredicted RBP10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms