RNA–Protein interactions for RNA: ENST00000459860.1

SSNA1-202, Transcript of SS nuclear autoantigen 1, humanhuman

TSL 1 (best)

Gene SSNA1, Length 1,170 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1-202ENST00000459860 BCL2L12Q9HB09 334 aa28.15■■■□□ 2.1
SSNA1-202ENST00000459860 KIF13BQ9NQT8 1826 aa28.15■■■□□ 2.1
SSNA1-202ENST00000459860 KIAA1551Q9HCM1 1747 aa28.15■■■□□ 2.1
SSNA1-202ENST00000459860 DPEP1P16444 411 aa28.14■■■□□ 2.1
SSNA1-202ENST00000459860 TSR2Q969E8 191 aaKnown RBP28.14■■■□□ 2.1
SSNA1-202ENST00000459860 CHMP4AQ9BY43 222 aa28.14■■■□□ 2.1
SSNA1-202ENST00000459860 AFDNP55196 1824 aaKnown RBP28.13■■■□□ 2.09
SSNA1-202ENST00000459860 TM4SF1P30408 202 aa28.13■■■□□ 2.09
SSNA1-202ENST00000459860 NFIXQ14938 502 aa28.13■■■□□ 2.09
SSNA1-202ENST00000459860 KCNA3P22001 575 aa28.12■■■□□ 2.09
SSNA1-202ENST00000459860 DDR1Q08345 913 aa28.12■■■□□ 2.09
SSNA1-202ENST00000459860 BICDL1Q6ZP65 573 aa28.12■■■□□ 2.09
SSNA1-202ENST00000459860 BCS1LQ9Y276 419 aa28.12■■■□□ 2.09
SSNA1-202ENST00000459860 POLRMTO00411 1230 aaKnown RBP28.11■■■□□ 2.09
SSNA1-202ENST00000459860 KIF3CO14782 793 aa28.11■■■□□ 2.09
SSNA1-202ENST00000459860 RGL2O15211 777 aa28.11■■■□□ 2.09
SSNA1-202ENST00000459860 CLEC4GQ6UXB4 293 aa28.11■■■□□ 2.09
SSNA1-202ENST00000459860 NRXN2Q9P2S2 1712 aa28.1■■■□□ 2.09
SSNA1-202ENST00000459860 ELL2O00472 640 aaPredicted RBP28.1■■■□□ 2.09
SSNA1-202ENST00000459860 MYH16Q9H6N6 1097 aa28.1■■■□□ 2.09
SSNA1-202ENST00000459860 DDX21Q9NR30 783 aaKnown RBP eCLIP28.1■■■□□ 2.09
SSNA1-202ENST00000459860 NUP98P52948 1817 aa28.1■■■□□ 2.09
SSNA1-202ENST00000459860 CARMIL3Q8ND23 1372 aa28.1■■■□□ 2.09
SSNA1-202ENST00000459860 TBC1D9BQ66K14 1250 aa28.09■■■□□ 2.09
SSNA1-202ENST00000459860 DBF4Q9UBU7 674 aaPredicted RBP28.09■■■□□ 2.09
SSNA1-202ENST00000459860 FANCIQ9NVI1 1328 aa28.09■■■□□ 2.09
SSNA1-202ENST00000459860 PDIA6Q15084 440 aa28.08■■■□□ 2.09
SSNA1-202ENST00000459860 C8orf58Q8NAV2 365 aa28.08■■■□□ 2.09
SSNA1-202ENST00000459860 SETDB2Q96T68 719 aa28.08■■■□□ 2.09
SSNA1-202ENST00000459860 CHPF2Q9P2E5 772 aa28.08■■■□□ 2.09
SSNA1-202ENST00000459860 MAP3K15Q6ZN16 1313 aa28.08■■■□□ 2.09
SSNA1-202ENST00000459860 ERVV-1B6SEH8 477 aa28.07■■■□□ 2.08
SSNA1-202ENST00000459860 ANXA1P04083 346 aa28.07■■■□□ 2.08
SSNA1-202ENST00000459860 SERPINB2P05120 415 aa28.07■■■□□ 2.08
SSNA1-202ENST00000459860 GOLGA2Q08379 1002 aa28.07■■■□□ 2.08
SSNA1-202ENST00000459860 HSPA6P17066 643 aa28.06■■■□□ 2.08
SSNA1-202ENST00000459860 PROSER3Q2NL68 480 aa28.06■■■□□ 2.08
SSNA1-202ENST00000459860 TTLL7Q6ZT98 887 aa28.06■■■□□ 2.08
SSNA1-202ENST00000459860 NPHP1O15259 732 aa28.05■■■□□ 2.08
SSNA1-202ENST00000459860 ARHGAP27Q6ZUM4 889 aa28.05■■■□□ 2.08
SSNA1-202ENST00000459860 ZBTB3Q9H5J0 574 aa28.05■■■□□ 2.08
SSNA1-202ENST00000459860 ZNF521Q96K83 1311 aa28.04■■■□□ 2.08
SSNA1-202ENST00000459860 TWISTNBQ3B726 338 aaPredicted RBP28.04■■■□□ 2.08
SSNA1-202ENST00000459860 CCDC30Q5VVM6 783 aa28.04■■■□□ 2.08
SSNA1-202ENST00000459860 HYPKQ9NX55 129 aa28.04■■■□□ 2.08
SSNA1-202ENST00000459860 N4BP2Q86UW6 1770 aaPredicted RBP28.04■■■□□ 2.08
SSNA1-202ENST00000459860 AIMP1Q12904 312 aaKnown RBP28.03■■■□□ 2.08
SSNA1-202ENST00000459860 LRP10Q7Z4F1 713 aa28.03■■■□□ 2.08
SSNA1-202ENST00000459860 NIP7Q9Y221 180 aaKnown RBP eCLIP28.03■■■□□ 2.08
SSNA1-202ENST00000459860 ANKRD36CQ5JPF3 1778 aa28.02■■■□□ 2.08
SSNA1-202ENST00000459860 HLFQ16534 295 aa28.02■■■□□ 2.08
SSNA1-202ENST00000459860 COPS6Q7L5N1 327 aa28.02■■■□□ 2.08
SSNA1-202ENST00000459860 XAGE3Q8WTP9 111 aa28.02■■■□□ 2.08
SSNA1-202ENST00000459860 TSPYL6Q8N831 410 aa28.01■■■□□ 2.07
SSNA1-202ENST00000459860 PIM2Q9P1W9 311 aa28.01■■■□□ 2.07
SSNA1-202ENST00000459860 CNBD1Q8NA66 436 aa28■■■□□ 2.07
SSNA1-202ENST00000459860 STK31Q9BXU1 1019 aa28■■■□□ 2.07
SSNA1-202ENST00000459860 GIGYF2Q6Y7W6 1299 aaKnown RBP27.99■■■□□ 2.07
SSNA1-202ENST00000459860 NBPF5PQ86XG9 351 aaPredicted RBP27.99■■■□□ 2.07
SSNA1-202ENST00000459860 SPINK5Q9NQ38 1064 aaPredicted RBP27.99■■■□□ 2.07
SSNA1-202ENST00000459860 E9PSI1 815 aa27.98■■■□□ 2.07
SSNA1-202ENST00000459860 ST5P78524 1137 aa27.98■■■□□ 2.07
SSNA1-202ENST00000459860 EXOSC9Q06265 439 aaKnown RBP27.98■■■□□ 2.07
SSNA1-202ENST00000459860 CHRNA5P30532 468 aa27.97■■■□□ 2.07
SSNA1-202ENST00000459860 HSP90AB3PQ58FF7 597 aa27.97■■■□□ 2.07
SSNA1-202ENST00000459860 DALRD3Q5D0E6 543 aaKnown RBP27.97■■■□□ 2.07
SSNA1-202ENST00000459860 CACNA1FO60840 1977 aa27.97■■■□□ 2.07
SSNA1-202ENST00000459860 ARFGEF2Q9Y6D5 1785 aa27.96■■■□□ 2.07
SSNA1-202ENST00000459860 PRR5LQ6MZQ0 368 aa27.96■■■□□ 2.07
SSNA1-202ENST00000459860 C9orf131Q5VYM1 1079 aa27.95■■■□□ 2.06
SSNA1-202ENST00000459860 BRCA1P38398 1863 aaKnown RBP27.95■■■□□ 2.06
SSNA1-202ENST00000459860 ANKRD31Q8N7Z5 1873 aa27.95■■■□□ 2.06
SSNA1-202ENST00000459860 DLEC1Q9Y238 1755 aa27.94■■■□□ 2.06
SSNA1-202ENST00000459860 TPTE2Q6XPS3 522 aa27.94■■■□□ 2.06
SSNA1-202ENST00000459860 NYXQ9GZU5 481 aa27.94■■■□□ 2.06
SSNA1-202ENST00000459860 NMRK2Q9NPI5 230 aa27.94■■■□□ 2.06
SSNA1-202ENST00000459860 FAM177BA6PVY3 158 aa27.93■■■□□ 2.06
SSNA1-202ENST00000459860 GPTP24298 496 aa27.93■■■□□ 2.06
SSNA1-202ENST00000459860 GTF2E1P29083 439 aaPredicted RBP27.93■■■□□ 2.06
SSNA1-202ENST00000459860 ANKRD13DQ6ZTN6 518 aa27.93■■■□□ 2.06
SSNA1-202ENST00000459860 PLBD2Q8NHP8 589 aa27.93■■■□□ 2.06
SSNA1-202ENST00000459860 TOMM70O94826 608 aa27.92■■■□□ 2.06
SSNA1-202ENST00000459860 DDX58O95786 925 aaKnown RBP27.92■■■□□ 2.06
SSNA1-202ENST00000459860 PARP10Q53GL7 1025 aa27.92■■■□□ 2.06
SSNA1-202ENST00000459860 IBTKQ9P2D0 1353 aaPredicted RBP27.91■■■□□ 2.06
SSNA1-202ENST00000459860 PDE6BP35913 854 aa27.91■■■□□ 2.06
SSNA1-202ENST00000459860 BRIP1Q9BX63 1249 aa27.91■■■□□ 2.06
SSNA1-202ENST00000459860 PHAXQ9H814 394 aaKnown RBP27.91■■■□□ 2.06
SSNA1-202ENST00000459860 PDZRN3Q9UPQ7 1066 aa27.91■■■□□ 2.06
SSNA1-202ENST00000459860 VAMP4O75379 141 aa27.9■■■□□ 2.06
SSNA1-202ENST00000459860 PPP1R42Q7Z4L9 355 aa27.9■■■□□ 2.06
SSNA1-202ENST00000459860 ZNF34Q8IZ26 560 aa27.9■■■□□ 2.06
SSNA1-202ENST00000459860 TCERG1O14776 1098 aaKnown RBP27.89■■■□□ 2.06
SSNA1-202ENST00000459860 HNRNPUQ00839 825 aaKnown RBP eCLIP27.89■■■□□ 2.06
SSNA1-202ENST00000459860 SLFN5Q08AF3 891 aa27.89■■■□□ 2.06
SSNA1-202ENST00000459860 RIC3Q7Z5B4 369 aa27.89■■■□□ 2.06
SSNA1-202ENST00000459860 CCDC24Q8N4L8 307 aa27.89■■■□□ 2.06
SSNA1-202ENST00000459860 UBN2Q6ZU65 1347 aa27.89■■■□□ 2.05
SSNA1-202ENST00000459860 H0YIN7 160 aa27.88■■■□□ 2.05
SSNA1-202ENST00000459860 COL11A2P13942 1736 aaPredicted RBP27.88■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms