RNA–Protein interactions for RNA: ENST00000459756.5

COL7A1-203, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 818 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-203ENST00000459756 ERVV-1B6SEH8 477 aa21.05■□□□□ 0.96
COL7A1-203ENST00000459756 MYL6BP14649 208 aa21.05■□□□□ 0.96
COL7A1-203ENST00000459756 CCDC184Q52MB2 194 aa21.05■□□□□ 0.96
COL7A1-203ENST00000459756 KIF6Q6ZMV9 814 aa21.05■□□□□ 0.96
COL7A1-203ENST00000459756 NGEFQ8N5V2 710 aa21.05■□□□□ 0.96
COL7A1-203ENST00000459756 LAS1LQ9Y4W2 734 aaKnown RBP21.05■□□□□ 0.96
COL7A1-203ENST00000459756 ADCY9O60503 1353 aa21.05■□□□□ 0.96
COL7A1-203ENST00000459756 ANKRD31Q8N7Z5 1873 aa21.05■□□□□ 0.96
COL7A1-203ENST00000459756 ST5P78524 1137 aa21.04■□□□□ 0.96
COL7A1-203ENST00000459756 NBPF5PQ86XG9 351 aaPredicted RBP21.04■□□□□ 0.96
COL7A1-203ENST00000459756 CFAP44Q96MT7 982 aa21.04■□□□□ 0.96
COL7A1-203ENST00000459756 NIP7Q9Y221 180 aaKnown RBP eCLIP21.04■□□□□ 0.96
COL7A1-203ENST00000459756 ATP10DQ9P241 1426 aa21.04■□□□□ 0.96
COL7A1-203ENST00000459756 MAP3K15Q6ZN16 1313 aa21.04■□□□□ 0.96
COL7A1-203ENST00000459756 EIF2S2P20042 333 aaKnown RBP21.03■□□□□ 0.96
COL7A1-203ENST00000459756 CALD1Q05682 793 aaKnown RBP21.03■□□□□ 0.96
COL7A1-203ENST00000459756 HLFQ16534 295 aa21.03■□□□□ 0.96
COL7A1-203ENST00000459756 TTLL7Q6ZT98 887 aa21.02■□□□□ 0.96
COL7A1-203ENST00000459756 CCDC24Q8N4L8 307 aa21.02■□□□□ 0.96
COL7A1-203ENST00000459756 TTLL6Q8N841 843 aa21.02■□□□□ 0.96
COL7A1-203ENST00000459756 TPTE2Q6XPS3 522 aa21.01■□□□□ 0.95
COL7A1-203ENST00000459756 MRS2Q9HD23 443 aa21.01■□□□□ 0.95
COL7A1-203ENST00000459756 NUP98P52948 1817 aa21.01■□□□□ 0.95
COL7A1-203ENST00000459756 HOXB7P09629 217 aa21■□□□□ 0.95
COL7A1-203ENST00000459756 PDIA6Q15084 440 aa21■□□□□ 0.95
COL7A1-203ENST00000459756 COL11A2P13942 1736 aaPredicted RBP20.99■□□□□ 0.95
COL7A1-203ENST00000459756 LRP10Q7Z4F1 713 aa20.99■□□□□ 0.95
COL7A1-203ENST00000459756 IFT57Q9NWB7 429 aa20.99■□□□□ 0.95
COL7A1-203ENST00000459756 ZNF853P0CG23 659 aa20.98■□□□□ 0.95
COL7A1-203ENST00000459756 GNAI1P63096 354 aa20.98■□□□□ 0.95
COL7A1-203ENST00000459756 KRT24Q2M2I5 525 aa20.98■□□□□ 0.95
COL7A1-203ENST00000459756 ZNF622Q969S3 477 aaKnown RBP eCLIP20.98■□□□□ 0.95
COL7A1-203ENST00000459756 ZBTB3Q9H5J0 574 aa20.98■□□□□ 0.95
COL7A1-203ENST00000459756 MBIPQ9NS73 344 aa20.98■□□□□ 0.95
COL7A1-203ENST00000459756 PROSER3Q2NL68 480 aa20.97■□□□□ 0.95
COL7A1-203ENST00000459756 NECTIN2Q92692 538 aa20.97■□□□□ 0.95
COL7A1-203ENST00000459756 NYXQ9GZU5 481 aa20.97■□□□□ 0.95
COL7A1-203ENST00000459756 SRGNP10124 158 aa20.96■□□□□ 0.95
COL7A1-203ENST00000459756 STYK1Q6J9G0 422 aa20.96■□□□□ 0.95
COL7A1-203ENST00000459756 GIGYF2Q6Y7W6 1299 aaKnown RBP20.96■□□□□ 0.95
COL7A1-203ENST00000459756 GPBP1L1Q9HC44 474 aaPredicted RBP20.96■□□□□ 0.95
COL7A1-203ENST00000459756 DDX21Q9NR30 783 aaKnown RBP eCLIP20.96■□□□□ 0.95
COL7A1-203ENST00000459756 KLRG2A4D1S0 409 aaPredicted RBP20.95■□□□□ 0.94
COL7A1-203ENST00000459756 FAM177BA6PVY3 158 aa20.95■□□□□ 0.94
COL7A1-203ENST00000459756 ANXA1P04083 346 aa20.95■□□□□ 0.94
COL7A1-203ENST00000459756 GTF2E1P29083 439 aaPredicted RBP20.95■□□□□ 0.94
COL7A1-203ENST00000459756 HDGFL1Q5TGJ6 251 aa20.95■□□□□ 0.94
COL7A1-203ENST00000459756 CNKSR1Q969H4 720 aa20.95■□□□□ 0.94
COL7A1-203ENST00000459756 MASTLQ96GX5 879 aa20.95■□□□□ 0.94
COL7A1-203ENST00000459756 IBTKQ9P2D0 1353 aaPredicted RBP20.95■□□□□ 0.94
COL7A1-203ENST00000459756 C9orf131Q5VYM1 1079 aa20.94■□□□□ 0.94
COL7A1-203ENST00000459756 DUSP27Q5VZP5 1158 aa20.94■□□□□ 0.94
COL7A1-203ENST00000459756 ZNF34Q8IZ26 560 aa20.94■□□□□ 0.94
COL7A1-203ENST00000459756 GPTP24298 496 aa20.93■□□□□ 0.94
COL7A1-203ENST00000459756 CCDC27Q2M243 656 aa20.93■□□□□ 0.94
COL7A1-203ENST00000459756 COPS6Q7L5N1 327 aa20.93■□□□□ 0.94
COL7A1-203ENST00000459756 ZNF526Q8TF50 670 aaPredicted RBP20.93■□□□□ 0.94
COL7A1-203ENST00000459756 XAGE3Q8WTP9 111 aa20.93■□□□□ 0.94
COL7A1-203ENST00000459756 CHPF2Q9P2E5 772 aa20.93■□□□□ 0.94
COL7A1-203ENST00000459756 SBF1O95248 1867 aa20.92■□□□□ 0.94
COL7A1-203ENST00000459756 NPR1P16066 1061 aa20.92■□□□□ 0.94
COL7A1-203ENST00000459756 NCBP3Q53F19 620 aaKnown RBP20.92■□□□□ 0.94
COL7A1-203ENST00000459756 DBF4Q9UBU7 674 aaPredicted RBP20.92■□□□□ 0.94
COL7A1-203ENST00000459756 UBN2Q6ZU65 1347 aa20.92■□□□□ 0.94
COL7A1-203ENST00000459756 ARFGEF2Q9Y6D5 1785 aa20.92■□□□□ 0.94
COL7A1-203ENST00000459756 PARP10Q53GL7 1025 aa20.91■□□□□ 0.94
COL7A1-203ENST00000459756 RNF181Q9P0P0 153 aa20.91■□□□□ 0.94
COL7A1-203ENST00000459756 RIC1Q4ADV7 1423 aa20.9■□□□□ 0.94
COL7A1-203ENST00000459756 C21orf2O43822 256 aa20.9■□□□□ 0.94
COL7A1-203ENST00000459756 C1QTNF8P60827 252 aa20.9■□□□□ 0.94
COL7A1-203ENST00000459756 AIMP1Q12904 312 aaKnown RBP20.9■□□□□ 0.94
COL7A1-203ENST00000459756 HSP90AB3PQ58FF7 597 aa20.9■□□□□ 0.94
COL7A1-203ENST00000459756 SUSD4Q5VX71 490 aa20.9■□□□□ 0.94
COL7A1-203ENST00000459756 PRPF40BQ6NWY9 871 aaKnown RBP20.9■□□□□ 0.94
COL7A1-203ENST00000459756 PPP1R42Q7Z4L9 355 aa20.9■□□□□ 0.94
COL7A1-203ENST00000459756 SLX4Q8IY92 1834 aa20.9■□□□□ 0.94
COL7A1-203ENST00000459756 ABCC12Q96J65 1359 aa20.89■□□□□ 0.93
COL7A1-203ENST00000459756 LMNB1P20700 586 aa20.89■□□□□ 0.93
COL7A1-203ENST00000459756 RASSF7Q02833 373 aa20.89■□□□□ 0.93
COL7A1-203ENST00000459756 ERFEQ4G0M1 354 aa20.89■□□□□ 0.93
COL7A1-203ENST00000459756 SOGA3Q5TF21 947 aa20.89■□□□□ 0.93
COL7A1-203ENST00000459756 NUTM1Q86Y26 1132 aa20.89■□□□□ 0.93
COL7A1-203ENST00000459756 WWC1Q8IX03 1113 aa20.89■□□□□ 0.93
COL7A1-203ENST00000459756 HYPKQ9NX55 129 aa20.89■□□□□ 0.93
COL7A1-203ENST00000459756 CACNA1SQ13698 1873 aa20.88■□□□□ 0.93
COL7A1-203ENST00000459756 ANKRD36CQ5JPF3 1778 aa20.88■□□□□ 0.93
COL7A1-203ENST00000459756 NTSR2O95665 410 aa20.88■□□□□ 0.93
COL7A1-203ENST00000459756 CHMP4AQ9BY43 222 aa20.88■□□□□ 0.93
COL7A1-203ENST00000459756 ZNF219Q9P2Y4 722 aaPredicted RBP20.88■□□□□ 0.93
COL7A1-203ENST00000459756 TNRC6CQ9HCJ0 1690 aaKnown RBP20.87■□□□□ 0.93
COL7A1-203ENST00000459756 ZC3H4Q9UPT8 1303 aaKnown RBP20.87■□□□□ 0.93
COL7A1-203ENST00000459756 NFKBIEO00221 500 aa20.87■□□□□ 0.93
COL7A1-203ENST00000459756 CRY2Q49AN0 593 aa20.87■□□□□ 0.93
COL7A1-203ENST00000459756 FER1L6Q2WGJ9 1857 aa20.87■□□□□ 0.93
COL7A1-203ENST00000459756 RNF123Q5XPI4 1314 aa20.86■□□□□ 0.93
COL7A1-203ENST00000459756 ELL2O00472 640 aaPredicted RBP20.86■□□□□ 0.93
COL7A1-203ENST00000459756 ALDH1B1P30837 517 aa20.86■□□□□ 0.93
COL7A1-203ENST00000459756 TCIRG1Q13488 830 aa20.86■□□□□ 0.93
COL7A1-203ENST00000459756 C8orf58Q8NAV2 365 aa20.86■□□□□ 0.93
COL7A1-203ENST00000459756 PLBD2Q8NHP8 589 aa20.86■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms