RNA–Protein interactions for RNA: ENST00000457302.2

C9orf139-201, Transcript of chromosome 9 open reading frame 139, humanhuman

TSL 3

Gene C9orf139, Length 697 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf139-201ENST00000457302 CCDC30Q5VVM6 783 aa15.87■□□□□ 0.13
C9orf139-201ENST00000457302 TSR2Q969E8 191 aaKnown RBP15.87■□□□□ 0.13
C9orf139-201ENST00000457302 HYPKQ9NX55 129 aa15.87■□□□□ 0.13
C9orf139-201ENST00000457302 NIP7Q9Y221 180 aaKnown RBP eCLIP15.87■□□□□ 0.13
C9orf139-201ENST00000457302 DDR1Q08345 913 aa15.86■□□□□ 0.13
C9orf139-201ENST00000457302 TPTE2Q6XPS3 522 aa15.86■□□□□ 0.13
C9orf139-201ENST00000457302 COPS6Q7L5N1 327 aa15.86■□□□□ 0.13
C9orf139-201ENST00000457302 NLGN2Q8NFZ4 835 aa15.86■□□□□ 0.13
C9orf139-201ENST00000457302 STK31Q9BXU1 1019 aa15.86■□□□□ 0.13
C9orf139-201ENST00000457302 MAP3K15Q6ZN16 1313 aa15.86■□□□□ 0.13
C9orf139-201ENST00000457302 GRIN3BO60391 1043 aa15.85■□□□□ 0.13
C9orf139-201ENST00000457302 ST5P78524 1137 aa15.85■□□□□ 0.13
C9orf139-201ENST00000457302 PDIA6Q15084 440 aa15.85■□□□□ 0.13
C9orf139-201ENST00000457302 HSP90AB3PQ58FF7 597 aa15.85■□□□□ 0.13
C9orf139-201ENST00000457302 TTLL7Q6ZT98 887 aa15.85■□□□□ 0.13
C9orf139-201ENST00000457302 NBPF5PQ86XG9 351 aaPredicted RBP15.85■□□□□ 0.13
C9orf139-201ENST00000457302 C8orf58Q8NAV2 365 aa15.85■□□□□ 0.13
C9orf139-201ENST00000457302 ZBTB3Q9H5J0 574 aa15.85■□□□□ 0.13
C9orf139-201ENST00000457302 CHPF2Q9P2E5 772 aa15.85■□□□□ 0.13
C9orf139-201ENST00000457302 CARMIL3Q8ND23 1372 aa15.85■□□□□ 0.13
C9orf139-201ENST00000457302 ANXA1P04083 346 aa15.84■□□□□ 0.13
C9orf139-201ENST00000457302 TWISTNBQ3B726 338 aaPredicted RBP15.84■□□□□ 0.13
C9orf139-201ENST00000457302 XAGE3Q8WTP9 111 aa15.84■□□□□ 0.13
C9orf139-201ENST00000457302 PDZRN3Q9UPQ7 1066 aa15.84■□□□□ 0.13
C9orf139-201ENST00000457302 A0A0G2JLW4 131 aa15.83■□□□□ 0.12
C9orf139-201ENST00000457302 PDE6BP35913 854 aa15.83■□□□□ 0.12
C9orf139-201ENST00000457302 HLFQ16534 295 aa15.83■□□□□ 0.12
C9orf139-201ENST00000457302 GIGYF2Q6Y7W6 1299 aaKnown RBP15.83■□□□□ 0.12
C9orf139-201ENST00000457302 CNBD1Q8NA66 436 aa15.83■□□□□ 0.12
C9orf139-201ENST00000457302 NYXQ9GZU5 481 aa15.83■□□□□ 0.12
C9orf139-201ENST00000457302 NUP98P52948 1817 aa15.82■□□□□ 0.12
C9orf139-201ENST00000457302 FAM177BA6PVY3 158 aa15.82■□□□□ 0.12
C9orf139-201ENST00000457302 H0YIN7 160 aa15.82■□□□□ 0.12
C9orf139-201ENST00000457302 PROSER3Q2NL68 480 aa15.82■□□□□ 0.12
C9orf139-201ENST00000457302 ANKRD13DQ6ZTN6 518 aa15.82■□□□□ 0.12
C9orf139-201ENST00000457302 PIM2Q9P1W9 311 aa15.82■□□□□ 0.12
C9orf139-201ENST00000457302 AFDNP55196 1824 aaKnown RBP15.82■□□□□ 0.12
C9orf139-201ENST00000457302 DDX58O95786 925 aaKnown RBP15.81■□□□□ 0.12
C9orf139-201ENST00000457302 DPEP1P16444 411 aa15.81■□□□□ 0.12
C9orf139-201ENST00000457302 PPP1R42Q7Z4L9 355 aa15.81■□□□□ 0.12
C9orf139-201ENST00000457302 RIC3Q7Z5B4 369 aa15.81■□□□□ 0.12
C9orf139-201ENST00000457302 BRIP1Q9BX63 1249 aa15.81■□□□□ 0.12
C9orf139-201ENST00000457302 FANCIQ9NVI1 1328 aa15.81■□□□□ 0.12
C9orf139-201ENST00000457302 E9PSI1 815 aa15.8■□□□□ 0.12
C9orf139-201ENST00000457302 GPTP24298 496 aa15.8■□□□□ 0.12
C9orf139-201ENST00000457302 EXOSC9Q06265 439 aaKnown RBP15.8■□□□□ 0.12
C9orf139-201ENST00000457302 PARP10Q53GL7 1025 aa15.8■□□□□ 0.12
C9orf139-201ENST00000457302 PRR5LQ6MZQ0 368 aa15.8■□□□□ 0.12
C9orf139-201ENST00000457302 TSPYL6Q8N831 410 aa15.8■□□□□ 0.12
C9orf139-201ENST00000457302 BCORQ6W2J9 1755 aa15.8■□□□□ 0.12
C9orf139-201ENST00000457302 SCN7AQ01118 1682 aa15.79■□□□□ 0.12
C9orf139-201ENST00000457302 C10orf71Q711Q0 1435 aa15.79■□□□□ 0.12
C9orf139-201ENST00000457302 C2CD5Q86YS7 1000 aa15.79■□□□□ 0.12
C9orf139-201ENST00000457302 PLBD2Q8NHP8 589 aa15.79■□□□□ 0.12
C9orf139-201ENST00000457302 WWC3Q9ULE0 1092 aa15.79■□□□□ 0.12
C9orf139-201ENST00000457302 BCS1LQ9Y276 419 aa15.79■□□□□ 0.12
C9orf139-201ENST00000457302 KIF13BQ9NQT8 1826 aa15.79■□□□□ 0.12
C9orf139-201ENST00000457302 SLC4A2P04920 1241 aa15.78■□□□□ 0.12
C9orf139-201ENST00000457302 TCIRG1Q13488 830 aa15.78■□□□□ 0.12
C9orf139-201ENST00000457302 DALRD3Q5D0E6 543 aaKnown RBP15.78■□□□□ 0.12
C9orf139-201ENST00000457302 LRP10Q7Z4F1 713 aa15.78■□□□□ 0.12
C9orf139-201ENST00000457302 ZNF34Q8IZ26 560 aa15.78■□□□□ 0.12
C9orf139-201ENST00000457302 CACNA1FO60840 1977 aa15.78■□□□□ 0.12
C9orf139-201ENST00000457302 N4BP2Q86UW6 1770 aaPredicted RBP15.77■□□□□ 0.12
C9orf139-201ENST00000457302 VAMP4O75379 141 aa15.77■□□□□ 0.12
C9orf139-201ENST00000457302 CHRNA5P30532 468 aa15.77■□□□□ 0.12
C9orf139-201ENST00000457302 CCDC24Q8N4L8 307 aa15.77■□□□□ 0.12
C9orf139-201ENST00000457302 ZNF622Q969S3 477 aaKnown RBP eCLIP15.77■□□□□ 0.12
C9orf139-201ENST00000457302 UTP14AQ9BVJ6 771 aaKnown RBP15.77■□□□□ 0.12
C9orf139-201ENST00000457302 PHAXQ9H814 394 aaKnown RBP15.77■□□□□ 0.12
C9orf139-201ENST00000457302 TCERG1O14776 1098 aaKnown RBP15.76■□□□□ 0.11
C9orf139-201ENST00000457302 SPINK5Q9NQ38 1064 aaPredicted RBP15.76■□□□□ 0.11
C9orf139-201ENST00000457302 ZNF521Q96K83 1311 aa15.75■□□□□ 0.11
C9orf139-201ENST00000457302 SLFN5Q08AF3 891 aa15.75■□□□□ 0.11
C9orf139-201ENST00000457302 SUSD4Q5VX71 490 aa15.75■□□□□ 0.11
C9orf139-201ENST00000457302 TTLL6Q8N841 843 aa15.75■□□□□ 0.11
C9orf139-201ENST00000457302 ATP10DQ9P241 1426 aa15.75■□□□□ 0.11
C9orf139-201ENST00000457302 NRXN2Q9P2S2 1712 aa15.74■□□□□ 0.11
C9orf139-201ENST00000457302 PXDNLA1KZ92 1463 aa15.74■□□□□ 0.11
C9orf139-201ENST00000457302 YBX3P16989 372 aaKnown RBP eCLIP15.74■□□□□ 0.11
C9orf139-201ENST00000457302 HNRNPUQ00839 825 aaKnown RBP eCLIP15.74■□□□□ 0.11
C9orf139-201ENST00000457302 NEXNQ0ZGT2 675 aa15.74■□□□□ 0.11
C9orf139-201ENST00000457302 CNKSR1Q969H4 720 aa15.74■□□□□ 0.11
C9orf139-201ENST00000457302 MASTLQ96GX5 879 aa15.74■□□□□ 0.11
C9orf139-201ENST00000457302 TRMT112Q9UI30 125 aaKnown RBP15.74■□□□□ 0.11
C9orf139-201ENST00000457302 CHD4Q14839 1912 aa15.74■□□□□ 0.11
C9orf139-201ENST00000457302 HSP90B1P14625 803 aaKnown RBP15.73■□□□□ 0.11
C9orf139-201ENST00000457302 KCNA3P22001 575 aa15.73■□□□□ 0.11
C9orf139-201ENST00000457302 ALDH1B1P30837 517 aa15.73■□□□□ 0.11
C9orf139-201ENST00000457302 KSR2Q6VAB6 950 aa15.73■□□□□ 0.11
C9orf139-201ENST00000457302 ARHGAP27Q6ZUM4 889 aa15.73■□□□□ 0.11
C9orf139-201ENST00000457302 NUTM1Q86Y26 1132 aa15.73■□□□□ 0.11
C9orf139-201ENST00000457302 NLRP3Q96P20 1036 aa15.73■□□□□ 0.11
C9orf139-201ENST00000457302 RNF123Q5XPI4 1314 aa15.72■□□□□ 0.11
C9orf139-201ENST00000457302 YY1P25490 414 aa15.72■□□□□ 0.11
C9orf139-201ENST00000457302 ERFEQ4G0M1 354 aa15.72■□□□□ 0.11
C9orf139-201ENST00000457302 STYK1Q6J9G0 422 aa15.72■□□□□ 0.11
C9orf139-201ENST00000457302 NLRP10Q86W26 655 aa15.72■□□□□ 0.11
C9orf139-201ENST00000457302 PI4KAP2A4QPH2 592 aa15.71■□□□□ 0.11
C9orf139-201ENST00000457302 ATP5J2-PTCD1G3V325 749 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms