RNA–Protein interactions for RNA: ENST00000456545.5

PDLIM2-215, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 757 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-215ENST00000456545 HLFQ16534 295 aa23.44■■□□□ 1.34
PDLIM2-215ENST00000456545 HDGFL1Q5TGJ6 251 aa23.44■■□□□ 1.34
PDLIM2-215ENST00000456545 DUSP27Q5VZP5 1158 aa23.44■■□□□ 1.34
PDLIM2-215ENST00000456545 TTLL7Q6ZT98 887 aa23.44■■□□□ 1.34
PDLIM2-215ENST00000456545 NBPF5PQ86XG9 351 aaPredicted RBP23.44■■□□□ 1.34
PDLIM2-215ENST00000456545 WWC1Q8IX03 1113 aa23.44■■□□□ 1.34
PDLIM2-215ENST00000456545 CNBD1Q8NA66 436 aa23.44■■□□□ 1.34
PDLIM2-215ENST00000456545 AFDNP55196 1824 aaKnown RBP23.44■■□□□ 1.34
PDLIM2-215ENST00000456545 MAP3K15Q6ZN16 1313 aa23.43■■□□□ 1.34
PDLIM2-215ENST00000456545 FAM177BA6PVY3 158 aa23.43■■□□□ 1.34
PDLIM2-215ENST00000456545 RGL2O15211 777 aa23.43■■□□□ 1.34
PDLIM2-215ENST00000456545 HOXB7P09629 217 aa23.43■■□□□ 1.34
PDLIM2-215ENST00000456545 GTF2E1P29083 439 aaPredicted RBP23.43■■□□□ 1.34
PDLIM2-215ENST00000456545 ZBTB3Q9H5J0 574 aa23.43■■□□□ 1.34
PDLIM2-215ENST00000456545 H0YIN7 160 aa23.42■■□□□ 1.34
PDLIM2-215ENST00000456545 ELL2O00472 640 aaPredicted RBP23.42■■□□□ 1.34
PDLIM2-215ENST00000456545 ANXA1P04083 346 aa23.42■■□□□ 1.34
PDLIM2-215ENST00000456545 AIMP1Q12904 312 aaKnown RBP23.42■■□□□ 1.34
PDLIM2-215ENST00000456545 DALRD3Q5D0E6 543 aaKnown RBP23.42■■□□□ 1.34
PDLIM2-215ENST00000456545 TPTE2Q6XPS3 522 aa23.42■■□□□ 1.34
PDLIM2-215ENST00000456545 C2CD5Q86YS7 1000 aa23.42■■□□□ 1.34
PDLIM2-215ENST00000456545 CCDC24Q8N4L8 307 aa23.42■■□□□ 1.34
PDLIM2-215ENST00000456545 BCORQ6W2J9 1755 aa23.42■■□□□ 1.34
PDLIM2-215ENST00000456545 CHD4Q14839 1912 aa23.41■■□□□ 1.34
PDLIM2-215ENST00000456545 PDE6BP35913 854 aa23.41■■□□□ 1.34
PDLIM2-215ENST00000456545 PDIA6Q15084 440 aa23.41■■□□□ 1.34
PDLIM2-215ENST00000456545 NCBP3Q53F19 620 aaKnown RBP23.41■■□□□ 1.34
PDLIM2-215ENST00000456545 PRR5LQ6MZQ0 368 aa23.41■■□□□ 1.34
PDLIM2-215ENST00000456545 DDX21Q9NR30 783 aaKnown RBP eCLIP23.41■■□□□ 1.34
PDLIM2-215ENST00000456545 KCNA3P22001 575 aa23.4■■□□□ 1.34
PDLIM2-215ENST00000456545 BRIP1Q9BX63 1249 aa23.4■■□□□ 1.34
PDLIM2-215ENST00000456545 CHMP4AQ9BY43 222 aa23.4■■□□□ 1.34
PDLIM2-215ENST00000456545 DBF4Q9UBU7 674 aaPredicted RBP23.4■■□□□ 1.34
PDLIM2-215ENST00000456545 PROSER3Q2NL68 480 aa23.39■■□□□ 1.33
PDLIM2-215ENST00000456545 ARHGAP27Q6ZUM4 889 aa23.39■■□□□ 1.33
PDLIM2-215ENST00000456545 COPS6Q7L5N1 327 aa23.39■■□□□ 1.33
PDLIM2-215ENST00000456545 CHPF2Q9P2E5 772 aa23.39■■□□□ 1.33
PDLIM2-215ENST00000456545 PDZRN3Q9UPQ7 1066 aa23.39■■□□□ 1.33
PDLIM2-215ENST00000456545 XAGE3Q8WTP9 111 aa23.38■■□□□ 1.33
PDLIM2-215ENST00000456545 NRXN2Q9P2S2 1712 aa23.38■■□□□ 1.33
PDLIM2-215ENST00000456545 GPTP24298 496 aa23.37■■□□□ 1.33
PDLIM2-215ENST00000456545 TSR2Q969E8 191 aaKnown RBP23.37■■□□□ 1.33
PDLIM2-215ENST00000456545 ZNF622Q969S3 477 aaKnown RBP eCLIP23.37■■□□□ 1.33
PDLIM2-215ENST00000456545 NYXQ9GZU5 481 aa23.37■■□□□ 1.33
PDLIM2-215ENST00000456545 GIGYF2Q6Y7W6 1299 aaKnown RBP23.36■■□□□ 1.33
PDLIM2-215ENST00000456545 WDR63Q8IWG1 891 aa23.36■■□□□ 1.33
PDLIM2-215ENST00000456545 C8orf58Q8NAV2 365 aa23.36■■□□□ 1.33
PDLIM2-215ENST00000456545 HYPKQ9NX55 129 aa23.36■■□□□ 1.33
PDLIM2-215ENST00000456545 KIAA1551Q9HCM1 1747 aa23.36■■□□□ 1.33
PDLIM2-215ENST00000456545 IL16Q14005 1332 aa23.35■■□□□ 1.33
PDLIM2-215ENST00000456545 TTLL6Q8N841 843 aa23.35■■□□□ 1.33
PDLIM2-215ENST00000456545 NUP98P52948 1817 aa23.34■■□□□ 1.33
PDLIM2-215ENST00000456545 HSP90AB3PQ58FF7 597 aa23.34■■□□□ 1.33
PDLIM2-215ENST00000456545 LRP10Q7Z4F1 713 aa23.34■■□□□ 1.33
PDLIM2-215ENST00000456545 CCDC30Q5VVM6 783 aa23.33■■□□□ 1.33
PDLIM2-215ENST00000456545 PPP1R42Q7Z4L9 355 aa23.33■■□□□ 1.33
PDLIM2-215ENST00000456545 CCER2I3L3R5 266 aa23.32■■□□□ 1.32
PDLIM2-215ENST00000456545 PARP10Q53GL7 1025 aa23.31■■□□□ 1.32
PDLIM2-215ENST00000456545 DIEXFQ68CQ4 756 aaKnown RBP23.31■■□□□ 1.32
PDLIM2-215ENST00000456545 ANKRD13DQ6ZTN6 518 aa23.31■■□□□ 1.32
PDLIM2-215ENST00000456545 ZNF34Q8IZ26 560 aa23.31■■□□□ 1.32
PDLIM2-215ENST00000456545 ATP10DQ9P241 1426 aa23.3■■□□□ 1.32
PDLIM2-215ENST00000456545 BRCA1P38398 1863 aaKnown RBP23.29■■□□□ 1.32
PDLIM2-215ENST00000456545 GOLGA2Q08379 1002 aa23.29■■□□□ 1.32
PDLIM2-215ENST00000456545 TWISTNBQ3B726 338 aaPredicted RBP23.29■■□□□ 1.32
PDLIM2-215ENST00000456545 SUSD4Q5VX71 490 aa23.29■■□□□ 1.32
PDLIM2-215ENST00000456545 NUTM1Q86Y26 1132 aa23.29■■□□□ 1.32
PDLIM2-215ENST00000456545 TSPYL6Q8N831 410 aa23.29■■□□□ 1.32
PDLIM2-215ENST00000456545 PLBD2Q8NHP8 589 aa23.29■■□□□ 1.32
PDLIM2-215ENST00000456545 CNKSR1Q969H4 720 aa23.29■■□□□ 1.32
PDLIM2-215ENST00000456545 MASTLQ96GX5 879 aa23.29■■□□□ 1.32
PDLIM2-215ENST00000456545 STK31Q9BXU1 1019 aa23.29■■□□□ 1.32
PDLIM2-215ENST00000456545 TCIRG1Q13488 830 aa23.28■■□□□ 1.32
PDLIM2-215ENST00000456545 RIC3Q7Z5B4 369 aa23.28■■□□□ 1.32
PDLIM2-215ENST00000456545 MYH16Q9H6N6 1097 aa23.28■■□□□ 1.32
PDLIM2-215ENST00000456545 SRGNP10124 158 aa23.27■■□□□ 1.32
PDLIM2-215ENST00000456545 ERFEQ4G0M1 354 aa23.27■■□□□ 1.32
PDLIM2-215ENST00000456545 STYK1Q6J9G0 422 aa23.27■■□□□ 1.32
PDLIM2-215ENST00000456545 UTP14AQ9BVJ6 771 aaKnown RBP23.27■■□□□ 1.32
PDLIM2-215ENST00000456545 ZNF219Q9P2Y4 722 aaPredicted RBP23.27■■□□□ 1.32
PDLIM2-215ENST00000456545 ANKRD31Q8N7Z5 1873 aa23.27■■□□□ 1.32
PDLIM2-215ENST00000456545 UBN2Q6ZU65 1347 aa23.27■■□□□ 1.32
PDLIM2-215ENST00000456545 NPR1P16066 1061 aa23.26■■□□□ 1.31
PDLIM2-215ENST00000456545 ZNF784Q8NCA9 323 aaPredicted RBP23.26■■□□□ 1.31
PDLIM2-215ENST00000456545 FANCIQ9NVI1 1328 aa23.26■■□□□ 1.31
PDLIM2-215ENST00000456545 ARFGEF1Q9Y6D6 1849 aa23.25■■□□□ 1.31
PDLIM2-215ENST00000456545 DDX58O95786 925 aaKnown RBP23.25■■□□□ 1.31
PDLIM2-215ENST00000456545 PHAXQ9H814 394 aaKnown RBP23.25■■□□□ 1.31
PDLIM2-215ENST00000456545 TCERG1O14776 1098 aaKnown RBP23.24■■□□□ 1.31
PDLIM2-215ENST00000456545 DLEC1Q9Y238 1755 aa23.23■■□□□ 1.31
PDLIM2-215ENST00000456545 C21orf2O43822 256 aa23.23■■□□□ 1.31
PDLIM2-215ENST00000456545 NTSR2O95665 410 aa23.23■■□□□ 1.31
PDLIM2-215ENST00000456545 EXOSC9Q06265 439 aaKnown RBP23.23■■□□□ 1.31
PDLIM2-215ENST00000456545 NLRP10Q86W26 655 aa23.23■■□□□ 1.31
PDLIM2-215ENST00000456545 RPGRQ92834 1020 aaKnown RBP23.23■■□□□ 1.31
PDLIM2-215ENST00000456545 TRMT112Q9UI30 125 aaKnown RBP23.23■■□□□ 1.31
PDLIM2-215ENST00000456545 ALDH1B1P30837 517 aa23.22■■□□□ 1.31
PDLIM2-215ENST00000456545 NLRP3Q96P20 1036 aa23.22■■□□□ 1.31
PDLIM2-215ENST00000456545 IBTKQ9P2D0 1353 aaPredicted RBP23.22■■□□□ 1.31
PDLIM2-215ENST00000456545 GOLGB1Q14789 3259 aaKnown RBP23.21■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms