RNA–Protein interactions for RNA: ENST00000456542.5

SP140-207, Transcript of SP140 nuclear body protein, humanhuman

TSL 4

Gene SP140, Length 580 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-207ENST00000456542 ERVV-1B6SEH8 477 aa11.01□□□□□ -0.65
SP140-207ENST00000456542 MYL6BP14649 208 aa11.01□□□□□ -0.65
SP140-207ENST00000456542 HDGFL1Q5TGJ6 251 aa11.01□□□□□ -0.65
SP140-207ENST00000456542 RNF39Q9H2S5 420 aa11.01□□□□□ -0.65
SP140-207ENST00000456542 DDX21Q9NR30 783 aaKnown RBP eCLIP11.01□□□□□ -0.65
SP140-207ENST00000456542 SALL2Q9Y467 1007 aaPredicted RBP11.01□□□□□ -0.65
SP140-207ENST00000456542 CARMIL3Q8ND23 1372 aa11.01□□□□□ -0.65
SP140-207ENST00000456542 ANKRD36CQ5JPF3 1778 aa11□□□□□ -0.65
SP140-207ENST00000456542 BRCA1P38398 1863 aaKnown RBP11□□□□□ -0.65
SP140-207ENST00000456542 TBC1D9BQ66K14 1250 aa11□□□□□ -0.65
SP140-207ENST00000456542 KIF6Q6ZMV9 814 aa11□□□□□ -0.65
SP140-207ENST00000456542 NLGN2Q8NFZ4 835 aa11□□□□□ -0.65
SP140-207ENST00000456542 TSR2Q969E8 191 aaKnown RBP11□□□□□ -0.65
SP140-207ENST00000456542 DBF4Q9UBU7 674 aaPredicted RBP11□□□□□ -0.65
SP140-207ENST00000456542 MAP3K15Q6ZN16 1313 aa11□□□□□ -0.65
SP140-207ENST00000456542 FANCIQ9NVI1 1328 aa11□□□□□ -0.65
SP140-207ENST00000456542 N4BP2Q86UW6 1770 aaPredicted RBP11□□□□□ -0.65
SP140-207ENST00000456542 ATP10DQ9P241 1426 aa11□□□□□ -0.65
SP140-207ENST00000456542 DLEC1Q9Y238 1755 aa10.99□□□□□ -0.65
SP140-207ENST00000456542 SERPINB2P05120 415 aa10.99□□□□□ -0.65
SP140-207ENST00000456542 TGFB2P61812 414 aa10.99□□□□□ -0.65
SP140-207ENST00000456542 PROSER3Q2NL68 480 aa10.99□□□□□ -0.65
SP140-207ENST00000456542 TTLL7Q6ZT98 887 aa10.99□□□□□ -0.65
SP140-207ENST00000456542 C8orf58Q8NAV2 365 aa10.99□□□□□ -0.65
SP140-207ENST00000456542 NECTIN2Q92692 538 aa10.99□□□□□ -0.65
SP140-207ENST00000456542 MYH16Q9H6N6 1097 aa10.99□□□□□ -0.65
SP140-207ENST00000456542 CHPF2Q9P2E5 772 aa10.99□□□□□ -0.65
SP140-207ENST00000456542 PXDNLA1KZ92 1463 aa10.99□□□□□ -0.65
SP140-207ENST00000456542 ANKRD31Q8N7Z5 1873 aa10.98□□□□□ -0.65
SP140-207ENST00000456542 ELL2O00472 640 aaPredicted RBP10.98□□□□□ -0.65
SP140-207ENST00000456542 ANXA1P04083 346 aa10.98□□□□□ -0.65
SP140-207ENST00000456542 GOLGA2Q08379 1002 aa10.98□□□□□ -0.65
SP140-207ENST00000456542 CCDC30Q5VVM6 783 aa10.98□□□□□ -0.65
SP140-207ENST00000456542 BICDL1Q6ZP65 573 aa10.98□□□□□ -0.65
SP140-207ENST00000456542 SETDB2Q96T68 719 aa10.98□□□□□ -0.65
SP140-207ENST00000456542 HYPKQ9NX55 129 aa10.98□□□□□ -0.65
SP140-207ENST00000456542 HLFQ16534 295 aa10.97□□□□□ -0.65
SP140-207ENST00000456542 TWISTNBQ3B726 338 aaPredicted RBP10.97□□□□□ -0.65
SP140-207ENST00000456542 GIGYF2Q6Y7W6 1299 aaKnown RBP10.97□□□□□ -0.65
SP140-207ENST00000456542 COPS6Q7L5N1 327 aa10.97□□□□□ -0.65
SP140-207ENST00000456542 TSPYL6Q8N831 410 aa10.97□□□□□ -0.65
SP140-207ENST00000456542 XAGE3Q8WTP9 111 aa10.97□□□□□ -0.65
SP140-207ENST00000456542 ZBTB3Q9H5J0 574 aa10.97□□□□□ -0.65
SP140-207ENST00000456542 SPINK5Q9NQ38 1064 aaPredicted RBP10.97□□□□□ -0.65
SP140-207ENST00000456542 IBTKQ9P2D0 1353 aaPredicted RBP10.97□□□□□ -0.65
SP140-207ENST00000456542 ARFGEF2Q9Y6D5 1785 aa10.97□□□□□ -0.65
SP140-207ENST00000456542 CHD4Q14839 1912 aa10.96□□□□□ -0.65
SP140-207ENST00000456542 ARFGEF1Q9Y6D6 1849 aa10.96□□□□□ -0.65
SP140-207ENST00000456542 PRR5LQ6MZQ0 368 aa10.96□□□□□ -0.65
SP140-207ENST00000456542 CNBD1Q8NA66 436 aa10.96□□□□□ -0.65
SP140-207ENST00000456542 NIP7Q9Y221 180 aaKnown RBP eCLIP10.96□□□□□ -0.65
SP140-207ENST00000456542 E9PSI1 815 aa10.95□□□□□ -0.66
SP140-207ENST00000456542 EXOSC9Q06265 439 aaKnown RBP10.95□□□□□ -0.66
SP140-207ENST00000456542 AIMP1Q12904 312 aaKnown RBP10.95□□□□□ -0.66
SP140-207ENST00000456542 HSP90AB3PQ58FF7 597 aa10.95□□□□□ -0.66
SP140-207ENST00000456542 ZNF34Q8IZ26 560 aa10.95□□□□□ -0.66
SP140-207ENST00000456542 PLBD2Q8NHP8 589 aa10.95□□□□□ -0.66
SP140-207ENST00000456542 VAMP4O75379 141 aa10.94□□□□□ -0.66
SP140-207ENST00000456542 ST5P78524 1137 aa10.94□□□□□ -0.66
SP140-207ENST00000456542 GPR162Q16538 588 aa10.94□□□□□ -0.66
SP140-207ENST00000456542 PARP10Q53GL7 1025 aa10.94□□□□□ -0.66
SP140-207ENST00000456542 TPTE2Q6XPS3 522 aa10.94□□□□□ -0.66
SP140-207ENST00000456542 ANKRD13DQ6ZTN6 518 aa10.94□□□□□ -0.66
SP140-207ENST00000456542 NBPF5PQ86XG9 351 aaPredicted RBP10.94□□□□□ -0.66
SP140-207ENST00000456542 BRIP1Q9BX63 1249 aa10.94□□□□□ -0.66
SP140-207ENST00000456542 STK31Q9BXU1 1019 aa10.94□□□□□ -0.66
SP140-207ENST00000456542 PDZRN3Q9UPQ7 1066 aa10.94□□□□□ -0.66
SP140-207ENST00000456542 COL11A2P13942 1736 aaPredicted RBP10.94□□□□□ -0.66
SP140-207ENST00000456542 RIC1Q4ADV7 1423 aa10.93□□□□□ -0.66
SP140-207ENST00000456542 RNF123Q5XPI4 1314 aa10.93□□□□□ -0.66
SP140-207ENST00000456542 UBN2Q6ZU65 1347 aa10.93□□□□□ -0.66
SP140-207ENST00000456542 A0A0G2JLW4 131 aa10.93□□□□□ -0.66
SP140-207ENST00000456542 NPHP1O15259 732 aa10.93□□□□□ -0.66
SP140-207ENST00000456542 GRIN3BO60391 1043 aa10.93□□□□□ -0.66
SP140-207ENST00000456542 DPEP1P16444 411 aa10.93□□□□□ -0.66
SP140-207ENST00000456542 PDE6BP35913 854 aa10.93□□□□□ -0.66
SP140-207ENST00000456542 SLFN5Q08AF3 891 aa10.93□□□□□ -0.66
SP140-207ENST00000456542 NYXQ9GZU5 481 aa10.93□□□□□ -0.66
SP140-207ENST00000456542 PHAXQ9H814 394 aaKnown RBP10.93□□□□□ -0.66
SP140-207ENST00000456542 DDX58O95786 925 aaKnown RBP10.92□□□□□ -0.66
SP140-207ENST00000456542 YBX3P16989 372 aaKnown RBP eCLIP10.92□□□□□ -0.66
SP140-207ENST00000456542 KCNA3P22001 575 aa10.92□□□□□ -0.66
SP140-207ENST00000456542 TCIRG1Q13488 830 aa10.92□□□□□ -0.66
SP140-207ENST00000456542 PIM2Q9P1W9 311 aa10.92□□□□□ -0.66
SP140-207ENST00000456542 NTSR2O95665 410 aa10.91□□□□□ -0.66
SP140-207ENST00000456542 SLC4A2P04920 1241 aa10.91□□□□□ -0.66
SP140-207ENST00000456542 GPTP24298 496 aa10.91□□□□□ -0.66
SP140-207ENST00000456542 CHRNA5P30532 468 aa10.91□□□□□ -0.66
SP140-207ENST00000456542 SUSD4Q5VX71 490 aa10.91□□□□□ -0.66
SP140-207ENST00000456542 PPP1R42Q7Z4L9 355 aa10.91□□□□□ -0.66
SP140-207ENST00000456542 TRMT2AQ8IZ69 625 aaKnown RBP10.91□□□□□ -0.66
SP140-207ENST00000456542 PELP1Q8IZL8 1130 aaKnown RBP10.91□□□□□ -0.66
SP140-207ENST00000456542 TNRC6CQ9HCJ0 1690 aaKnown RBP10.91□□□□□ -0.66
SP140-207ENST00000456542 CACNA1SQ13698 1873 aa10.91□□□□□ -0.66
SP140-207ENST00000456542 KLRG2A4D1S0 409 aaPredicted RBP10.9□□□□□ -0.66
SP140-207ENST00000456542 H0YIN7 160 aa10.9□□□□□ -0.66
SP140-207ENST00000456542 GTF2E1P29083 439 aaPredicted RBP10.9□□□□□ -0.66
SP140-207ENST00000456542 TRIM28Q13263 835 aaKnown RBP10.9□□□□□ -0.66
SP140-207ENST00000456542 RIC3Q7Z5B4 369 aa10.9□□□□□ -0.66
SP140-207ENST00000456542 NLRP10Q86W26 655 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms