RNA–Protein interactions for RNA: ENST00000456174.6

HDAC9-218, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-218ENST00000456174 HSP90B1P14625 803 aaKnown RBP9.25□□□□□ -0.93
HDAC9-218ENST00000456174 CERS3Q8IU89 383 aa9.25□□□□□ -0.93
HDAC9-218ENST00000456174 PRDM11Q9NQV5 511 aa9.25□□□□□ -0.93
HDAC9-218ENST00000456174 CALCOCO1Q9P1Z2 691 aa9.25□□□□□ -0.93
HDAC9-218ENST00000456174 PTPRCP08575 1304 aa9.25□□□□□ -0.93
HDAC9-218ENST00000456174 SOS1Q07889 1333 aaPredicted RBP9.25□□□□□ -0.93
HDAC9-218ENST00000456174 SCN11AQ9UI33 1791 aa9.25□□□□□ -0.93
HDAC9-218ENST00000456174 ADAMTS7Q9UKP4 1686 aa9.25□□□□□ -0.93
HDAC9-218ENST00000456174 ZBTB7BO15156 539 aaPredicted RBP9.25□□□□□ -0.93
HDAC9-218ENST00000456174 TATP17735 454 aaPredicted RBP9.25□□□□□ -0.93
HDAC9-218ENST00000456174 FAM193AP78312 1265 aa9.25□□□□□ -0.93
HDAC9-218ENST00000456174 KIAA2012Q0VF49 1180 aa9.25□□□□□ -0.93
HDAC9-218ENST00000456174 CNPY4Q8N129 248 aa9.25□□□□□ -0.93
HDAC9-218ENST00000456174 SPRYD3Q8NCJ5 442 aa9.25□□□□□ -0.93
HDAC9-218ENST00000456174 BCL2L12Q9HB09 334 aa9.25□□□□□ -0.93
HDAC9-218ENST00000456174 OVOS2A0A0G2JMS6 1433 aa9.24□□□□□ -0.93
HDAC9-218ENST00000456174 ROBO1Q9Y6N7 1651 aa9.24□□□□□ -0.93
HDAC9-218ENST00000456174 CCDC30Q5VVM6 783 aa9.24□□□□□ -0.93
HDAC9-218ENST00000456174 HSCBQ8IWL3 235 aa9.24□□□□□ -0.93
HDAC9-218ENST00000456174 STK31Q9BXU1 1019 aa9.24□□□□□ -0.93
HDAC9-218ENST00000456174 RGS12O14924 1447 aa9.24□□□□□ -0.93
HDAC9-218ENST00000456174 MEGF6O75095 1541 aa9.24□□□□□ -0.93
HDAC9-218ENST00000456174 PKD1L3Q7Z443 1732 aa9.24□□□□□ -0.93
HDAC9-218ENST00000456174 BTBD11A6QL63 1104 aa9.23□□□□□ -0.93
HDAC9-218ENST00000456174 TRIM6-TRIM34B2RNG4 842 aa9.23□□□□□ -0.93
HDAC9-218ENST00000456174 HDAC1Q13547 482 aaPredicted RBP9.23□□□□□ -0.93
HDAC9-218ENST00000456174 SNX21Q969T3 373 aa9.23□□□□□ -0.93
HDAC9-218ENST00000456174 TRIM34Q9BYJ4 488 aa9.23□□□□□ -0.93
HDAC9-218ENST00000456174 INTS3Q68E01 1043 aaKnown RBP9.23□□□□□ -0.93
HDAC9-218ENST00000456174 G2E3Q7L622 706 aa9.23□□□□□ -0.93
HDAC9-218ENST00000456174 NECTIN2Q92692 538 aa9.23□□□□□ -0.93
HDAC9-218ENST00000456174 SPG7Q9UQ90 795 aa9.23□□□□□ -0.93
HDAC9-218ENST00000456174 PARP4Q9UKK3 1724 aaKnown RBP9.23□□□□□ -0.93
HDAC9-218ENST00000456174 LTBP4Q8N2S1 1624 aa9.23□□□□□ -0.93
HDAC9-218ENST00000456174 IGSF3O75054 1194 aa9.22□□□□□ -0.93
HDAC9-218ENST00000456174 EIF4A1P60842 406 aaKnown RBP9.22□□□□□ -0.93
HDAC9-218ENST00000456174 CREBRFQ8IUR6 639 aa9.22□□□□□ -0.93
HDAC9-218ENST00000456174 TSC1Q92574 1164 aa9.22□□□□□ -0.93
HDAC9-218ENST00000456174 JARID2Q92833 1246 aaPredicted RBP9.22□□□□□ -0.93
HDAC9-218ENST00000456174 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.22□□□□□ -0.93
HDAC9-218ENST00000456174 ZNF219Q9P2Y4 722 aaPredicted RBP9.22□□□□□ -0.93
HDAC9-218ENST00000456174 PLEKHG2Q9H7P9 1386 aa9.22□□□□□ -0.93
HDAC9-218ENST00000456174 WDR17Q8IZU2 1322 aa9.22□□□□□ -0.93
HDAC9-218ENST00000456174 KCNQ3O43525 872 aa9.22□□□□□ -0.93
HDAC9-218ENST00000456174 HMGB1P09429 215 aaKnown RBP9.22□□□□□ -0.93
HDAC9-218ENST00000456174 RBSNQ9H1K0 784 aa9.22□□□□□ -0.93
HDAC9-218ENST00000456174 PDZRN3Q9UPQ7 1066 aa9.22□□□□□ -0.93
HDAC9-218ENST00000456174 COL5A2P05997 1499 aaPredicted RBP9.22□□□□□ -0.93
HDAC9-218ENST00000456174 PHKG2P15735 406 aa9.21□□□□□ -0.93
HDAC9-218ENST00000456174 U2AF2P26368 475 aaKnown RBP eCLIP9.21□□□□□ -0.93
HDAC9-218ENST00000456174 PROM2Q8N271 834 aa9.21□□□□□ -0.93
HDAC9-218ENST00000456174 C1orf115Q9H7X2 142 aa9.21□□□□□ -0.93
HDAC9-218ENST00000456174 HDGFL1Q5TGJ6 251 aa9.21□□□□□ -0.94
HDAC9-218ENST00000456174 TOM1L2Q6ZVM7 507 aa9.21□□□□□ -0.94
HDAC9-218ENST00000456174 IFNL2Q8IZJ0 200 aa9.21□□□□□ -0.94
HDAC9-218ENST00000456174 C22orf23Q9BZE7 217 aa9.21□□□□□ -0.94
HDAC9-218ENST00000456174 GOLGA6L22H0YM25 854 aa9.2□□□□□ -0.94
HDAC9-218ENST00000456174 HOXB7P09629 217 aa9.2□□□□□ -0.94
HDAC9-218ENST00000456174 MFAP1P55081 439 aaKnown RBP9.2□□□□□ -0.94
HDAC9-218ENST00000456174 FLIIQ13045 1269 aa9.2□□□□□ -0.94
HDAC9-218ENST00000456174 TERF2Q15554 542 aa9.2□□□□□ -0.94
HDAC9-218ENST00000456174 PIBF1Q8WXW3 757 aa9.2□□□□□ -0.94
HDAC9-218ENST00000456174 N4BP2Q86UW6 1770 aaPredicted RBP9.2□□□□□ -0.94
HDAC9-218ENST00000456174 KDM6AO15550 1401 aaPredicted RBP9.2□□□□□ -0.94
HDAC9-218ENST00000456174 AHDC1Q5TGY3 1603 aaPredicted RBP9.2□□□□□ -0.94
HDAC9-218ENST00000456174 F6X3S4 739 aa9.2□□□□□ -0.94
HDAC9-218ENST00000456174 CTIFO43310 598 aaKnown RBP9.2□□□□□ -0.94
HDAC9-218ENST00000456174 APPP05067 770 aa9.2□□□□□ -0.94
HDAC9-218ENST00000456174 EIF2S2P20042 333 aaKnown RBP9.2□□□□□ -0.94
HDAC9-218ENST00000456174 FKBP5Q13451 457 aaPredicted RBP9.2□□□□□ -0.94
HDAC9-218ENST00000456174 SYCP1Q15431 976 aa9.2□□□□□ -0.94
HDAC9-218ENST00000456174 GRIPAP1Q4V328 841 aa9.2□□□□□ -0.94
HDAC9-218ENST00000456174 SPTLC3Q9NUV7 552 aa9.2□□□□□ -0.94
HDAC9-218ENST00000456174 FEZ2Q9UHY8 353 aaPredicted RBP9.2□□□□□ -0.94
HDAC9-218ENST00000456174 SLC4A10Q6U841 1118 aa9.19□□□□□ -0.94
HDAC9-218ENST00000456174 CYP27B1O15528 508 aa9.19□□□□□ -0.94
HDAC9-218ENST00000456174 PTMAP06454 111 aaKnown RBP9.19□□□□□ -0.94
HDAC9-218ENST00000456174 CCT4P50991 539 aaKnown RBP9.19□□□□□ -0.94
HDAC9-218ENST00000456174 EVA1CP58658 441 aa9.19□□□□□ -0.94
HDAC9-218ENST00000456174 ZSCAN23Q3MJ62 389 aa9.19□□□□□ -0.94
HDAC9-218ENST00000456174 SLC52A2Q9HAB3 445 aa9.19□□□□□ -0.94
HDAC9-218ENST00000456174 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.19□□□□□ -0.94
HDAC9-218ENST00000456174 DDX49Q9Y6V7 483 aaKnown RBP9.19□□□□□ -0.94
HDAC9-218ENST00000456174 MORC2Q9Y6X9 1032 aaPredicted RBP9.19□□□□□ -0.94
HDAC9-218ENST00000456174 COL22A1Q8NFW1 1626 aaPredicted RBP9.18□□□□□ -0.94
HDAC9-218ENST00000456174 DCAF5Q96JK2 942 aa9.18□□□□□ -0.94
HDAC9-218ENST00000456174 CARD10Q9BWT7 1032 aa9.18□□□□□ -0.94
HDAC9-218ENST00000456174 STRN4Q9NRL3 753 aa9.18□□□□□ -0.94
HDAC9-218ENST00000456174 DDX41Q9UJV9 622 aaKnown RBP9.18□□□□□ -0.94
HDAC9-218ENST00000456174 HEG1Q9ULI3 1381 aa9.18□□□□□ -0.94
HDAC9-218ENST00000456174 GIGYF1O75420 1035 aaPredicted RBP9.17□□□□□ -0.94
HDAC9-218ENST00000456174 LARP1Q6PKG0 1096 aaKnown RBP9.17□□□□□ -0.94
HDAC9-218ENST00000456174 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.17□□□□□ -0.94
HDAC9-218ENST00000456174 SIRT2Q8IXJ6 389 aa9.17□□□□□ -0.94
HDAC9-218ENST00000456174 NFATC2IPQ8NCF5 419 aa9.17□□□□□ -0.94
HDAC9-218ENST00000456174 PHAXQ9H814 394 aaKnown RBP9.17□□□□□ -0.94
HDAC9-218ENST00000456174 CTNNA3Q9UI47 895 aa9.17□□□□□ -0.94
HDAC9-218ENST00000456174 COL14A1Q05707 1796 aaKnown RBP9.17□□□□□ -0.94
HDAC9-218ENST00000456174 PHLPP1O60346 1717 aa9.17□□□□□ -0.94
HDAC9-218ENST00000456174 SHANK3Q9BYB0 1731 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms