RNA–Protein interactions for RNA: ENST00000456019.1

COL13A1-206, Transcript of collagen type XIII alpha 1 chain, humanhuman

TSL 2

Gene COL13A1, Length 749 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-206ENST00000456019 ST5P78524 1137 aa23.21■■□□□ 1.31
COL13A1-206ENST00000456019 ERBB4Q15303 1308 aa23.2■■□□□ 1.3
COL13A1-206ENST00000456019 C1QTNF8P60827 252 aa23.2■■□□□ 1.3
COL13A1-206ENST00000456019 CCDC24Q8N4L8 307 aa23.2■■□□□ 1.3
COL13A1-206ENST00000456019 TRIM35Q9UPQ4 493 aa23.2■■□□□ 1.3
COL13A1-206ENST00000456019 NBPF5PQ86XG9 351 aaPredicted RBP23.19■■□□□ 1.3
COL13A1-206ENST00000456019 NGEFQ8N5V2 710 aa23.19■■□□□ 1.3
COL13A1-206ENST00000456019 ZNF526Q8TF50 670 aaPredicted RBP23.19■■□□□ 1.3
COL13A1-206ENST00000456019 NIP7Q9Y221 180 aaKnown RBP eCLIP23.19■■□□□ 1.3
COL13A1-206ENST00000456019 ANKRD31Q8N7Z5 1873 aa23.19■■□□□ 1.3
COL13A1-206ENST00000456019 ERVV-1B6SEH8 477 aa23.17■■□□□ 1.3
COL13A1-206ENST00000456019 MYL6BP14649 208 aa23.17■■□□□ 1.3
COL13A1-206ENST00000456019 HLFQ16534 295 aa23.17■■□□□ 1.3
COL13A1-206ENST00000456019 C9orf131Q5VYM1 1079 aa23.17■■□□□ 1.3
COL13A1-206ENST00000456019 KIF6Q6ZMV9 814 aa23.17■■□□□ 1.3
COL13A1-206ENST00000456019 ZNF622Q969S3 477 aaKnown RBP eCLIP23.17■■□□□ 1.3
COL13A1-206ENST00000456019 MAP3K15Q6ZN16 1313 aa23.16■■□□□ 1.3
COL13A1-206ENST00000456019 ZNF316A6NFI3 1004 aaPredicted RBP23.16■■□□□ 1.3
COL13A1-206ENST00000456019 CHL1O00533 1208 aa23.16■■□□□ 1.3
COL13A1-206ENST00000456019 TPTE2Q6XPS3 522 aa23.16■■□□□ 1.3
COL13A1-206ENST00000456019 LAS1LQ9Y4W2 734 aaKnown RBP23.15■■□□□ 1.3
COL13A1-206ENST00000456019 EIF2S2P20042 333 aaKnown RBP23.14■■□□□ 1.29
COL13A1-206ENST00000456019 TTLL7Q6ZT98 887 aa23.14■■□□□ 1.29
COL13A1-206ENST00000456019 COL11A2P13942 1736 aaPredicted RBP23.13■■□□□ 1.29
COL13A1-206ENST00000456019 RNF181Q9P0P0 153 aa23.13■■□□□ 1.29
COL13A1-206ENST00000456019 SRGNP10124 158 aa23.12■■□□□ 1.29
COL13A1-206ENST00000456019 STYK1Q6J9G0 422 aa23.12■■□□□ 1.29
COL13A1-206ENST00000456019 CNKSR1Q969H4 720 aa23.12■■□□□ 1.29
COL13A1-206ENST00000456019 MASTLQ96GX5 879 aa23.12■■□□□ 1.29
COL13A1-206ENST00000456019 FAM177BA6PVY3 158 aa23.11■■□□□ 1.29
COL13A1-206ENST00000456019 APAF1O14727 1248 aa23.11■■□□□ 1.29
COL13A1-206ENST00000456019 ZBTB3Q9H5J0 574 aa23.11■■□□□ 1.29
COL13A1-206ENST00000456019 GTF2E1P29083 439 aaPredicted RBP23.1■■□□□ 1.29
COL13A1-206ENST00000456019 RASSF7Q02833 373 aa23.1■■□□□ 1.29
COL13A1-206ENST00000456019 PDIA6Q15084 440 aa23.1■■□□□ 1.29
COL13A1-206ENST00000456019 CFAP44Q96MT7 982 aa23.1■■□□□ 1.29
COL13A1-206ENST00000456019 NYXQ9GZU5 481 aa23.1■■□□□ 1.29
COL13A1-206ENST00000456019 LRP10Q7Z4F1 713 aa23.09■■□□□ 1.29
COL13A1-206ENST00000456019 NUP98P52948 1817 aa23.08■■□□□ 1.29
COL13A1-206ENST00000456019 KLRG2A4D1S0 409 aaPredicted RBP23.08■■□□□ 1.29
COL13A1-206ENST00000456019 C21orf2O43822 256 aa23.08■■□□□ 1.29
COL13A1-206ENST00000456019 LMNB1P20700 586 aa23.08■■□□□ 1.29
COL13A1-206ENST00000456019 GIGYF2Q6Y7W6 1299 aaKnown RBP23.08■■□□□ 1.29
COL13A1-206ENST00000456019 HOXB7P09629 217 aa23.07■■□□□ 1.28
COL13A1-206ENST00000456019 NPR1P16066 1061 aa23.07■■□□□ 1.28
COL13A1-206ENST00000456019 CALD1Q05682 793 aaKnown RBP23.07■■□□□ 1.28
COL13A1-206ENST00000456019 KRT24Q2M2I5 525 aa23.07■■□□□ 1.28
COL13A1-206ENST00000456019 PROSER3Q2NL68 480 aa23.07■■□□□ 1.28
COL13A1-206ENST00000456019 PRPF40BQ6NWY9 871 aaKnown RBP23.07■■□□□ 1.28
COL13A1-206ENST00000456019 NECTIN2Q92692 538 aa23.07■■□□□ 1.28
COL13A1-206ENST00000456019 ZNF219Q9P2Y4 722 aaPredicted RBP23.07■■□□□ 1.28
COL13A1-206ENST00000456019 SBF1O95248 1867 aa23.07■■□□□ 1.28
COL13A1-206ENST00000456019 ZC3H4Q9UPT8 1303 aaKnown RBP23.07■■□□□ 1.28
COL13A1-206ENST00000456019 NFKBIEO00221 500 aa23.06■■□□□ 1.28
COL13A1-206ENST00000456019 KIF3CO14782 793 aa23.06■■□□□ 1.28
COL13A1-206ENST00000456019 ANP32CO43423 234 aa23.06■■□□□ 1.28
COL13A1-206ENST00000456019 ANXA1P04083 346 aa23.06■■□□□ 1.28
COL13A1-206ENST00000456019 GPTP24298 496 aa23.06■■□□□ 1.28
COL13A1-206ENST00000456019 CCDC184Q52MB2 194 aa23.06■■□□□ 1.28
COL13A1-206ENST00000456019 ZNF34Q8IZ26 560 aa23.06■■□□□ 1.28
COL13A1-206ENST00000456019 IBTKQ9P2D0 1353 aaPredicted RBP23.05■■□□□ 1.28
COL13A1-206ENST00000456019 SENP3-EIF4A1A0A087X0R7 540 aa23.05■■□□□ 1.28
COL13A1-206ENST00000456019 SOGA3Q5TF21 947 aa23.05■■□□□ 1.28
COL13A1-206ENST00000456019 DDX21Q9NR30 783 aaKnown RBP eCLIP23.05■■□□□ 1.28
COL13A1-206ENST00000456019 UBN2Q6ZU65 1347 aa23.05■■□□□ 1.28
COL13A1-206ENST00000456019 ZNF853P0CG23 659 aa23.04■■□□□ 1.28
COL13A1-206ENST00000456019 MBIPQ9NS73 344 aa23.04■■□□□ 1.28
COL13A1-206ENST00000456019 IFT57Q9NWB7 429 aa23.04■■□□□ 1.28
COL13A1-206ENST00000456019 KDM2BQ8NHM5 1336 aa23.04■■□□□ 1.28
COL13A1-206ENST00000456019 ARFGEF2Q9Y6D5 1785 aa23.04■■□□□ 1.28
COL13A1-206ENST00000456019 PRELPP51888 382 aa23.03■■□□□ 1.28
COL13A1-206ENST00000456019 GNAI1P63096 354 aa23.03■■□□□ 1.28
COL13A1-206ENST00000456019 PARP10Q53GL7 1025 aa23.03■■□□□ 1.28
COL13A1-206ENST00000456019 HDGFL1Q5TGJ6 251 aa23.03■■□□□ 1.28
COL13A1-206ENST00000456019 SUSD4Q5VX71 490 aa23.03■■□□□ 1.28
COL13A1-206ENST00000456019 COPS6Q7L5N1 327 aa23.03■■□□□ 1.28
COL13A1-206ENST00000456019 NUTM1Q86Y26 1132 aa23.03■■□□□ 1.28
COL13A1-206ENST00000456019 ERFEQ4G0M1 354 aa23.02■■□□□ 1.28
COL13A1-206ENST00000456019 PPP1R42Q7Z4L9 355 aa23.02■■□□□ 1.28
COL13A1-206ENST00000456019 XAGE3Q8WTP9 111 aa23.02■■□□□ 1.28
COL13A1-206ENST00000456019 NMRK2Q9NPI5 230 aa23.02■■□□□ 1.28
COL13A1-206ENST00000456019 CHPF2Q9P2E5 772 aa23.02■■□□□ 1.28
COL13A1-206ENST00000456019 SLX4Q8IY92 1834 aa23.02■■□□□ 1.28
COL13A1-206ENST00000456019 ABCC12Q96J65 1359 aa23.01■■□□□ 1.27
COL13A1-206ENST00000456019 RIC1Q4ADV7 1423 aa23.01■■□□□ 1.27
COL13A1-206ENST00000456019 AIMP1Q12904 312 aaKnown RBP23.01■■□□□ 1.27
COL13A1-206ENST00000456019 HSP90AB3PQ58FF7 597 aa23.01■■□□□ 1.27
COL13A1-206ENST00000456019 DUSP27Q5VZP5 1158 aa23.01■■□□□ 1.27
COL13A1-206ENST00000456019 MRS2Q9HD23 443 aa23.01■■□□□ 1.27
COL13A1-206ENST00000456019 LTBP3Q9NS15 1303 aa23.01■■□□□ 1.27
COL13A1-206ENST00000456019 NTSR2O95665 410 aa23■■□□□ 1.27
COL13A1-206ENST00000456019 ALDH1B1P30837 517 aa23■■□□□ 1.27
COL13A1-206ENST00000456019 CRY2Q49AN0 593 aa23■■□□□ 1.27
COL13A1-206ENST00000456019 TAOK3Q9H2K8 898 aa23■■□□□ 1.27
COL13A1-206ENST00000456019 DBF4Q9UBU7 674 aaPredicted RBP23■■□□□ 1.27
COL13A1-206ENST00000456019 CACNA1SQ13698 1873 aa23■■□□□ 1.27
COL13A1-206ENST00000456019 FER1L6Q2WGJ9 1857 aa22.99■■□□□ 1.27
COL13A1-206ENST00000456019 C7orf43Q8WVR3 580 aa22.99■■□□□ 1.27
COL13A1-206ENST00000456019 TNRC6CQ9HCJ0 1690 aaKnown RBP22.99■■□□□ 1.27
COL13A1-206ENST00000456019 CCDC93Q567U6 631 aa22.98■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms