RNA–Protein interactions for RNA: ENST00000455883.2

CSMD3-204, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 12,485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-204ENST00000455883 GOLGA8QA0A0J9YX86 632 aa6□□□□□ -1.45
CSMD3-204ENST00000455883 GOLGA8OA6NCC3 632 aa6□□□□□ -1.45
CSMD3-204ENST00000455883 GOLGA8NF8WBI6 632 aa6□□□□□ -1.45
CSMD3-204ENST00000455883 RILPL2Q969X0 211 aa6□□□□□ -1.45
CSMD3-204ENST00000455883 CEP63Q96MT8 703 aa6□□□□□ -1.45
CSMD3-204ENST00000455883 CITO14578 2027 aa6□□□□□ -1.45
CSMD3-204ENST00000455883 ATP2A2P16615 1042 aaKnown RBP6□□□□□ -1.45
CSMD3-204ENST00000455883 EHMT1Q9H9B1 1298 aa6□□□□□ -1.45
CSMD3-204ENST00000455883 ACTN2P35609 894 aa6□□□□□ -1.45
CSMD3-204ENST00000455883 CTNNBL1Q8WYA6 563 aaPredicted RBP6□□□□□ -1.45
CSMD3-204ENST00000455883 INTS4Q96HW7 963 aaKnown RBP6□□□□□ -1.45
CSMD3-204ENST00000455883 TSG101Q99816 390 aa6□□□□□ -1.45
CSMD3-204ENST00000455883 SHANK2Q9UPX8 1470 aa6□□□□□ -1.45
CSMD3-204ENST00000455883 GTF2E1P29083 439 aaPredicted RBP6□□□□□ -1.45
CSMD3-204ENST00000455883 CACNA2D3Q8IZS8 1091 aa6□□□□□ -1.45
CSMD3-204ENST00000455883 SHROOM2Q13796 1616 aa6□□□□□ -1.45
CSMD3-204ENST00000455883 GDAP1L1Q96MZ0 367 aa5.99□□□□□ -1.45
CSMD3-204ENST00000455883 SMC6Q96SB8 1091 aa5.99□□□□□ -1.45
CSMD3-204ENST00000455883 SELENOOQ9BVL4 669 aa5.99□□□□□ -1.45
CSMD3-204ENST00000455883 TSKSQ9UJT2 592 aa5.99□□□□□ -1.45
CSMD3-204ENST00000455883 GLRX3O76003 335 aaKnown RBP5.99□□□□□ -1.45
CSMD3-204ENST00000455883 ME1P48163 572 aa5.99□□□□□ -1.45
CSMD3-204ENST00000455883 MNAT1P51948 309 aa5.99□□□□□ -1.45
CSMD3-204ENST00000455883 PUS7Q96PZ0 661 aaKnown RBP5.99□□□□□ -1.45
CSMD3-204ENST00000455883 MRGBPQ9NV56 204 aa5.99□□□□□ -1.45
CSMD3-204ENST00000455883 SEC63Q9UGP8 760 aaKnown RBP5.99□□□□□ -1.45
CSMD3-204ENST00000455883 MVPQ14764 893 aaKnown RBP5.99□□□□□ -1.45
CSMD3-204ENST00000455883 SEPT14Q6ZU15 432 aa5.99□□□□□ -1.45
CSMD3-204ENST00000455883 TAOK1Q7L7X3 1001 aa5.99□□□□□ -1.45
CSMD3-204ENST00000455883 LARSQ9P2J5 1176 aaKnown RBP5.99□□□□□ -1.45
CSMD3-204ENST00000455883 CCDC158Q5M9N0 1113 aa5.99□□□□□ -1.45
CSMD3-204ENST00000455883 GLT8D2Q9H1C3 349 aa5.99□□□□□ -1.45
CSMD3-204ENST00000455883 VCX3AQ9NNX9 186 aa5.99□□□□□ -1.45
CSMD3-204ENST00000455883 ZNF318Q5VUA4 2279 aa5.99□□□□□ -1.45
CSMD3-204ENST00000455883 PRRC2BQ5JSZ5 2229 aaKnown RBP5.99□□□□□ -1.45
CSMD3-204ENST00000455883 GOLGA1Q92805 767 aa5.99□□□□□ -1.45
CSMD3-204ENST00000455883 SPECC1Q5M775 1068 aa5.99□□□□□ -1.45
CSMD3-204ENST00000455883 CCDC114Q96M63 670 aa5.99□□□□□ -1.45
CSMD3-204ENST00000455883 POGZQ7Z3K3 1410 aa5.99□□□□□ -1.45
CSMD3-204ENST00000455883 ASXL1Q8IXJ9 1541 aa5.99□□□□□ -1.45
CSMD3-204ENST00000455883 RASSF4Q9H2L5 321 aa5.99□□□□□ -1.45
CSMD3-204ENST00000455883 ARHGAP31Q2M1Z3 1444 aa5.99□□□□□ -1.45
CSMD3-204ENST00000455883 KIF5BP33176 963 aa5.99□□□□□ -1.45
CSMD3-204ENST00000455883 MSANTD4Q8NCY6 345 aa5.99□□□□□ -1.45
CSMD3-204ENST00000455883 ST20-MTHFSA0A0A6YYL1 179 aa5.98□□□□□ -1.45
CSMD3-204ENST00000455883 TMEM266Q2M3C6 531 aa5.98□□□□□ -1.45
CSMD3-204ENST00000455883 DUSP27Q5VZP5 1158 aa5.98□□□□□ -1.45
CSMD3-204ENST00000455883 MPHOSPH6Q99547 160 aaKnown RBP5.98□□□□□ -1.45
CSMD3-204ENST00000455883 MAGI1Q96QZ7 1491 aaPredicted RBP5.98□□□□□ -1.45
CSMD3-204ENST00000455883 NPHP3Q7Z494 1330 aa5.98□□□□□ -1.45
CSMD3-204ENST00000455883 CACNA1CQ13936 2221 aa5.98□□□□□ -1.45
CSMD3-204ENST00000455883 KRT83P78385 493 aa5.98□□□□□ -1.45
CSMD3-204ENST00000455883 WASHC4Q2M389 1173 aa5.98□□□□□ -1.45
CSMD3-204ENST00000455883 VPS53Q5VIR6 699 aa5.98□□□□□ -1.45
CSMD3-204ENST00000455883 BLOC1S2Q6QNY1 142 aa5.98□□□□□ -1.45
CSMD3-204ENST00000455883 CSRNP2Q9H175 543 aa5.98□□□□□ -1.45
CSMD3-204ENST00000455883 MED4Q9NPJ6 270 aa5.98□□□□□ -1.45
CSMD3-204ENST00000455883 TRPC3Q13507 836 aa5.98□□□□□ -1.45
CSMD3-204ENST00000455883 TMTC2Q8N394 836 aa5.98□□□□□ -1.45
CSMD3-204ENST00000455883 PPIP5K1Q6PFW1 1433 aa5.98□□□□□ -1.45
CSMD3-204ENST00000455883 MYH7BA7E2Y1 1941 aa5.98□□□□□ -1.45
CSMD3-204ENST00000455883 HSP90AA5PQ58FG0 334 aa5.98□□□□□ -1.45
CSMD3-204ENST00000455883 HOMEZQ8IX15 550 aa5.98□□□□□ -1.45
CSMD3-204ENST00000455883 KCNG4Q8TDN1 519 aa5.98□□□□□ -1.45
CSMD3-204ENST00000455883 GFM2Q969S9 779 aaKnown RBP5.98□□□□□ -1.45
CSMD3-204ENST00000455883 NUCKS1Q9H1E3 243 aaKnown RBP5.98□□□□□ -1.45
CSMD3-204ENST00000455883 STRN4Q9NRL3 753 aa5.98□□□□□ -1.45
CSMD3-204ENST00000455883 MYH1P12882 1939 aa5.98□□□□□ -1.45
CSMD3-204ENST00000455883 MYH2Q9UKX2 1941 aa5.98□□□□□ -1.45
CSMD3-204ENST00000455883 MYH4Q9Y623 1939 aa5.98□□□□□ -1.45
CSMD3-204ENST00000455883 ABCA5Q8WWZ7 1642 aa5.98□□□□□ -1.45
CSMD3-204ENST00000455883 SLC8A1P32418 973 aa5.98□□□□□ -1.45
CSMD3-204ENST00000455883 VAV2P52735 878 aa5.98□□□□□ -1.45
CSMD3-204ENST00000455883 EIF5P55010 431 aaKnown RBP5.98□□□□□ -1.45
CSMD3-204ENST00000455883 IFFO1Q0D2I5 559 aa5.98□□□□□ -1.45
CSMD3-204ENST00000455883 ATF7IPQ6VMQ6 1270 aa5.98□□□□□ -1.45
CSMD3-204ENST00000455883 MMRN2Q9H8L6 949 aa5.98□□□□□ -1.45
CSMD3-204ENST00000455883 TROQ12816 1431 aaPredicted RBP5.98□□□□□ -1.45
CSMD3-204ENST00000455883 CECR2Q9BXF3 1484 aa5.98□□□□□ -1.45
CSMD3-204ENST00000455883 ARHGAP45Q92619 1136 aa5.98□□□□□ -1.45
CSMD3-204ENST00000455883 A0A087WZG4 1122 aa5.98□□□□□ -1.45
CSMD3-204ENST00000455883 PPP2R5BQ15173 497 aa5.98□□□□□ -1.45
CSMD3-204ENST00000455883 CFAP58Q5T655 872 aa5.98□□□□□ -1.45
CSMD3-204ENST00000455883 SNX21Q969T3 373 aa5.98□□□□□ -1.45
CSMD3-204ENST00000455883 POLE3Q9NRF9 147 aa5.98□□□□□ -1.45
CSMD3-204ENST00000455883 CASQ1P31415 396 aa5.98□□□□□ -1.45
CSMD3-204ENST00000455883 CCDC40Q4G0X9 1142 aa5.98□□□□□ -1.45
CSMD3-204ENST00000455883 CACNA2D4Q7Z3S7 1137 aa5.98□□□□□ -1.45
CSMD3-204ENST00000455883 ANKRD24Q8TF21 1146 aa5.98□□□□□ -1.45
CSMD3-204ENST00000455883 PIBF1Q8WXW3 757 aa5.98□□□□□ -1.45
CSMD3-204ENST00000455883 P3H4Q92791 437 aa5.98□□□□□ -1.45
CSMD3-204ENST00000455883 UTP14AQ9BVJ6 771 aaKnown RBP5.98□□□□□ -1.45
CSMD3-204ENST00000455883 MSL1Q68DK7 614 aa5.97□□□□□ -1.45
CSMD3-204ENST00000455883 LMNTD2Q8IXW0 634 aa5.97□□□□□ -1.45
CSMD3-204ENST00000455883 TSNARE1Q96NA8 513 aa5.97□□□□□ -1.45
CSMD3-204ENST00000455883 CFTRP13569 1480 aa5.97□□□□□ -1.45
CSMD3-204ENST00000455883 CTAGE9A4FU28 777 aa5.97□□□□□ -1.45
CSMD3-204ENST00000455883 MPHOSPH10O00566 681 aaKnown RBP5.97□□□□□ -1.45
CSMD3-204ENST00000455883 HSPA8P11142 646 aaKnown RBP5.97□□□□□ -1.45
CSMD3-204ENST00000455883 CEP135Q66GS9 1140 aa5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms