RNA–Protein interactions for RNA: ENST00000454964.3

ATXN3-205, Transcript of ataxin 3, humanhuman

TSL 2

Gene ATXN3, Length 598 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-205ENST00000454964 SPINK5Q9NQ38 1064 aaPredicted RBP12.11□□□□□ -0.47
ATXN3-205ENST00000454964 CHPF2Q9P2E5 772 aa12.11□□□□□ -0.47
ATXN3-205ENST00000454964 ATF5Q9Y2D1 282 aaPredicted RBP12.11□□□□□ -0.47
ATXN3-205ENST00000454964 PTPRCP08575 1304 aa12.11□□□□□ -0.47
ATXN3-205ENST00000454964 MAP3K15Q6ZN16 1313 aa12.11□□□□□ -0.47
ATXN3-205ENST00000454964 PRAMEF22A3QJZ6 481 aa12.1□□□□□ -0.47
ATXN3-205ENST00000454964 NBPF26B4DH59 902 aa12.1□□□□□ -0.47
ATXN3-205ENST00000454964 PDIA6Q15084 440 aa12.1□□□□□ -0.47
ATXN3-205ENST00000454964 PARP10Q53GL7 1025 aa12.1□□□□□ -0.47
ATXN3-205ENST00000454964 NBPF10Q6P3W6 841 aaKnown RBP12.1□□□□□ -0.47
ATXN3-205ENST00000454964 GIGYF2Q6Y7W6 1299 aaKnown RBP12.1□□□□□ -0.47
ATXN3-205ENST00000454964 COPS6Q7L5N1 327 aa12.1□□□□□ -0.47
ATXN3-205ENST00000454964 RIC3Q7Z5B4 369 aa12.1□□□□□ -0.47
ATXN3-205ENST00000454964 NBPF15Q8N660 670 aa12.1□□□□□ -0.47
ATXN3-205ENST00000454964 ARHGAP45Q92619 1136 aa12.1□□□□□ -0.47
ATXN3-205ENST00000454964 NYXQ9GZU5 481 aa12.1□□□□□ -0.47
ATXN3-205ENST00000454964 HDAC5Q9UQL6 1122 aa12.1□□□□□ -0.47
ATXN3-205ENST00000454964 PARP3Q9Y6F1 533 aa12.1□□□□□ -0.47
ATXN3-205ENST00000454964 RNF123Q5XPI4 1314 aa12.1□□□□□ -0.47
ATXN3-205ENST00000454964 NUP98P52948 1817 aa12.09□□□□□ -0.47
ATXN3-205ENST00000454964 TUBGCP6Q96RT7 1819 aa12.09□□□□□ -0.47
ATXN3-205ENST00000454964 SENP3-EIF4A1A0A087X0R7 540 aa12.09□□□□□ -0.47
ATXN3-205ENST00000454964 KRT24Q2M2I5 525 aa12.09□□□□□ -0.47
ATXN3-205ENST00000454964 KSR2Q6VAB6 950 aa12.09□□□□□ -0.47
ATXN3-205ENST00000454964 TPTE2Q6XPS3 522 aa12.09□□□□□ -0.47
ATXN3-205ENST00000454964 PPP1R42Q7Z4L9 355 aa12.09□□□□□ -0.47
ATXN3-205ENST00000454964 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.09□□□□□ -0.47
ATXN3-205ENST00000454964 TBC1D2BQ9UPU7 963 aa12.09□□□□□ -0.47
ATXN3-205ENST00000454964 KIF16BQ96L93 1317 aa12.09□□□□□ -0.47
ATXN3-205ENST00000454964 PSDA5PKW4 1024 aaPredicted RBP12.08□□□□□ -0.48
ATXN3-205ENST00000454964 GYS1P13807 737 aa12.08□□□□□ -0.48
ATXN3-205ENST00000454964 TRIM28Q13263 835 aaKnown RBP12.08□□□□□ -0.48
ATXN3-205ENST00000454964 TCIRG1Q13488 830 aa12.08□□□□□ -0.48
ATXN3-205ENST00000454964 USPL1Q5W0Q7 1092 aa12.08□□□□□ -0.48
ATXN3-205ENST00000454964 XAGE3Q8WTP9 111 aa12.08□□□□□ -0.48
ATXN3-205ENST00000454964 NECTIN2Q92692 538 aa12.08□□□□□ -0.48
ATXN3-205ENST00000454964 CASZ1Q86V15 1759 aa12.07□□□□□ -0.48
ATXN3-205ENST00000454964 NPHP1O15259 732 aa12.07□□□□□ -0.48
ATXN3-205ENST00000454964 CAMTA2O94983 1202 aa12.07□□□□□ -0.48
ATXN3-205ENST00000454964 TM4SF1P30408 202 aa12.07□□□□□ -0.48
ATXN3-205ENST00000454964 FLIIQ13045 1269 aa12.07□□□□□ -0.48
ATXN3-205ENST00000454964 FKBP5Q13451 457 aaPredicted RBP12.07□□□□□ -0.48
ATXN3-205ENST00000454964 COL24A1Q17RW2 1714 aa12.07□□□□□ -0.48
ATXN3-205ENST00000454964 SMC4Q9NTJ3 1288 aa12.07□□□□□ -0.48
ATXN3-205ENST00000454964 PPP1R1BQ9UD71 204 aaPredicted RBP12.07□□□□□ -0.48
ATXN3-205ENST00000454964 C4AP0C0L4 1744 aa12.06□□□□□ -0.48
ATXN3-205ENST00000454964 AIMP1Q12904 312 aaKnown RBP12.06□□□□□ -0.48
ATXN3-205ENST00000454964 LRP10Q7Z4F1 713 aa12.06□□□□□ -0.48
ATXN3-205ENST00000454964 API5Q9BZZ5 524 aaKnown RBP12.06□□□□□ -0.48
ATXN3-205ENST00000454964 CHMP4BQ9H444 224 aaKnown RBP12.06□□□□□ -0.48
ATXN3-205ENST00000454964 CARMIL3Q8ND23 1372 aa12.05□□□□□ -0.48
ATXN3-205ENST00000454964 GTF2E1P29083 439 aaPredicted RBP12.05□□□□□ -0.48
ATXN3-205ENST00000454964 RARSP54136 660 aaKnown RBP12.05□□□□□ -0.48
ATXN3-205ENST00000454964 CCDC191Q8NCU4 936 aa12.05□□□□□ -0.48
ATXN3-205ENST00000454964 NIP7Q9Y221 180 aaKnown RBP eCLIP12.05□□□□□ -0.48
ATXN3-205ENST00000454964 CD2APQ9Y5K6 639 aa12.05□□□□□ -0.48
ATXN3-205ENST00000454964 BCORQ6W2J9 1755 aa12.05□□□□□ -0.48
ATXN3-205ENST00000454964 IBTKQ9P2D0 1353 aaPredicted RBP12.05□□□□□ -0.48
ATXN3-205ENST00000454964 ATP10DQ9P241 1426 aa12.04□□□□□ -0.48
ATXN3-205ENST00000454964 PI4KAP2A4QPH2 592 aa12.04□□□□□ -0.48
ATXN3-205ENST00000454964 ZBTB7AO95365 584 aa12.04□□□□□ -0.48
ATXN3-205ENST00000454964 ST5P78524 1137 aa12.04□□□□□ -0.48
ATXN3-205ENST00000454964 ZNF34Q8IZ26 560 aa12.04□□□□□ -0.48
ATXN3-205ENST00000454964 MRPL50Q8N5N7 158 aaKnown RBP12.04□□□□□ -0.48
ATXN3-205ENST00000454964 PI4KAP1Q8N8J0 262 aa12.04□□□□□ -0.48
ATXN3-205ENST00000454964 DNAAF4Q8WXU2 420 aa12.04□□□□□ -0.48
ATXN3-205ENST00000454964 METTL22Q9BUU2 404 aaPredicted RBP12.04□□□□□ -0.48
ATXN3-205ENST00000454964 SERPINB2P05120 415 aa12.03□□□□□ -0.48
ATXN3-205ENST00000454964 MMP10P09238 476 aa12.03□□□□□ -0.48
ATXN3-205ENST00000454964 TGFB2P61812 414 aa12.03□□□□□ -0.48
ATXN3-205ENST00000454964 FKBP8Q14318 412 aa12.03□□□□□ -0.48
ATXN3-205ENST00000454964 PROSER3Q2NL68 480 aa12.03□□□□□ -0.48
ATXN3-205ENST00000454964 TTLL7Q6ZT98 887 aa12.03□□□□□ -0.48
ATXN3-205ENST00000454964 NBPF5PQ86XG9 351 aaPredicted RBP12.03□□□□□ -0.48
ATXN3-205ENST00000454964 LINS1Q8NG48 757 aa12.03□□□□□ -0.48
ATXN3-205ENST00000454964 SSH1Q8WYL5 1049 aa12.03□□□□□ -0.48
ATXN3-205ENST00000454964 YTHDC1Q96MU7 727 aaKnown RBP12.03□□□□□ -0.48
ATXN3-205ENST00000454964 UTP14AQ9BVJ6 771 aaKnown RBP12.03□□□□□ -0.48
ATXN3-205ENST00000454964 ZBTB3Q9H5J0 574 aa12.03□□□□□ -0.48
ATXN3-205ENST00000454964 PHAXQ9H814 394 aaKnown RBP12.03□□□□□ -0.48
ATXN3-205ENST00000454964 SRP68Q9UHB9 627 aaKnown RBP12.03□□□□□ -0.48
ATXN3-205ENST00000454964 SCN7AQ01118 1682 aa12.03□□□□□ -0.48
ATXN3-205ENST00000454964 ANKRD36CQ5JPF3 1778 aa12.02□□□□□ -0.48
ATXN3-205ENST00000454964 ALDH1L1O75891 902 aa12.02□□□□□ -0.49
ATXN3-205ENST00000454964 PDE6BP35913 854 aa12.02□□□□□ -0.49
ATXN3-205ENST00000454964 PIP4K2AP48426 406 aaPredicted RBP12.02□□□□□ -0.49
ATXN3-205ENST00000454964 CCT4P50991 539 aaKnown RBP12.02□□□□□ -0.49
ATXN3-205ENST00000454964 NFIXQ14938 502 aa12.02□□□□□ -0.49
ATXN3-205ENST00000454964 ZKSCAN2Q63HK3 967 aa12.02□□□□□ -0.49
ATXN3-205ENST00000454964 CNBD1Q8NA66 436 aa12.02□□□□□ -0.49
ATXN3-205ENST00000454964 RCAN3Q9UKA8 241 aa12.02□□□□□ -0.49
ATXN3-205ENST00000454964 MAP3K2Q9Y2U5 619 aa12.02□□□□□ -0.49
ATXN3-205ENST00000454964 POLRMTO00411 1230 aaKnown RBP12.01□□□□□ -0.49
ATXN3-205ENST00000454964 ANXA1P04083 346 aa12.01□□□□□ -0.49
ATXN3-205ENST00000454964 TBC1D9BQ66K14 1250 aa12.01□□□□□ -0.49
ATXN3-205ENST00000454964 AMIGO3Q86WK7 504 aa12.01□□□□□ -0.49
ATXN3-205ENST00000454964 SGIP1Q9BQI5 828 aa12.01□□□□□ -0.49
ATXN3-205ENST00000454964 ISCA1Q9BUE6 129 aa12.01□□□□□ -0.49
ATXN3-205ENST00000454964 BRIP1Q9BX63 1249 aa12.01□□□□□ -0.49
ATXN3-205ENST00000454964 BCL2L12Q9HB09 334 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms