RNA–Protein interactions for RNA: ENST00000454824.5

NCL-206, Transcript of nucleolin, humanhuman

TSL 3

Gene NCL, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-206ENST00000454824 USP42Q9H9J4 1324 aaKnown RBP8.9□□□□□ -0.98
NCL-206ENST00000454824 HDGFL1Q5TGJ6 251 aa8.9□□□□□ -0.98
NCL-206ENST00000454824 DUSP27Q5VZP5 1158 aa8.9□□□□□ -0.98
NCL-206ENST00000454824 WDR63Q8IWG1 891 aa8.9□□□□□ -0.98
NCL-206ENST00000454824 MYH16Q9H6N6 1097 aa8.9□□□□□ -0.98
NCL-206ENST00000454824 UBR2Q8IWV8 1755 aa8.9□□□□□ -0.98
NCL-206ENST00000454824 COL5A3P25940 1745 aaPredicted RBP8.9□□□□□ -0.98
NCL-206ENST00000454824 TJP1Q07157 1748 aa8.9□□□□□ -0.98
NCL-206ENST00000454824 GOLGA2Q08379 1002 aa8.89□□□□□ -0.99
NCL-206ENST00000454824 AIMP1Q12904 312 aaKnown RBP8.89□□□□□ -0.99
NCL-206ENST00000454824 KRT24Q2M2I5 525 aa8.89□□□□□ -0.99
NCL-206ENST00000454824 TSR2Q969E8 191 aaKnown RBP8.89□□□□□ -0.99
NCL-206ENST00000454824 SETDB2Q96T68 719 aa8.89□□□□□ -0.99
NCL-206ENST00000454824 SYT17Q9BSW7 474 aa8.89□□□□□ -0.99
NCL-206ENST00000454824 LRP5O75197 1615 aa8.89□□□□□ -0.99
NCL-206ENST00000454824 IL16Q14005 1332 aa8.88□□□□□ -0.99
NCL-206ENST00000454824 NBPF26B4DH59 902 aa8.88□□□□□ -0.99
NCL-206ENST00000454824 PITPNM1O00562 1244 aa8.88□□□□□ -0.99
NCL-206ENST00000454824 ZNF853P0CG23 659 aa8.88□□□□□ -0.99
NCL-206ENST00000454824 GTF2E1P29083 439 aaPredicted RBP8.88□□□□□ -0.99
NCL-206ENST00000454824 GPR162Q16538 588 aa8.88□□□□□ -0.99
NCL-206ENST00000454824 NBPF10Q6P3W6 841 aaKnown RBP8.88□□□□□ -0.99
NCL-206ENST00000454824 NBPF15Q8N660 670 aa8.88□□□□□ -0.99
NCL-206ENST00000454824 SGIP1Q9BQI5 828 aa8.88□□□□□ -0.99
NCL-206ENST00000454824 STK31Q9BXU1 1019 aa8.88□□□□□ -0.99
NCL-206ENST00000454824 CREBZFQ9NS37 354 aa8.88□□□□□ -0.99
NCL-206ENST00000454824 DBF4Q9UBU7 674 aaPredicted RBP8.88□□□□□ -0.99
NCL-206ENST00000454824 ERBB4Q15303 1308 aa8.87□□□□□ -0.99
NCL-206ENST00000454824 KDM3BQ7LBC6 1761 aa8.87□□□□□ -0.99
NCL-206ENST00000454824 FAM177BA6PVY3 158 aa8.87□□□□□ -0.99
NCL-206ENST00000454824 ANXA1P04083 346 aa8.87□□□□□ -0.99
NCL-206ENST00000454824 SERPINB2P05120 415 aa8.87□□□□□ -0.99
NCL-206ENST00000454824 HOXB7P09629 217 aa8.87□□□□□ -0.99
NCL-206ENST00000454824 NFIXQ14938 502 aa8.87□□□□□ -0.99
NCL-206ENST00000454824 CCDC30Q5VVM6 783 aa8.87□□□□□ -0.99
NCL-206ENST00000454824 ZBTB3Q9H5J0 574 aa8.87□□□□□ -0.99
NCL-206ENST00000454824 DDX21Q9NR30 783 aaKnown RBP eCLIP8.87□□□□□ -0.99
NCL-206ENST00000454824 HYPKQ9NX55 129 aa8.87□□□□□ -0.99
NCL-206ENST00000454824 CD2APQ9Y5K6 639 aa8.87□□□□□ -0.99
NCL-206ENST00000454824 CAMTA2O94983 1202 aa8.86□□□□□ -0.99
NCL-206ENST00000454824 TWISTNBQ3B726 338 aaPredicted RBP8.86□□□□□ -0.99
NCL-206ENST00000454824 TBC1D9BQ66K14 1250 aa8.86□□□□□ -0.99
NCL-206ENST00000454824 CLEC4GQ6UXB4 293 aa8.86□□□□□ -0.99
NCL-206ENST00000454824 COPS6Q7L5N1 327 aa8.86□□□□□ -0.99
NCL-206ENST00000454824 NBPF5PQ86XG9 351 aaPredicted RBP8.86□□□□□ -0.99
NCL-206ENST00000454824 C8orf58Q8NAV2 365 aa8.86□□□□□ -0.99
NCL-206ENST00000454824 XAGE3Q8WTP9 111 aa8.86□□□□□ -0.99
NCL-206ENST00000454824 CHPF2Q9P2E5 772 aa8.86□□□□□ -0.99
NCL-206ENST00000454824 NIP7Q9Y221 180 aaKnown RBP eCLIP8.86□□□□□ -0.99
NCL-206ENST00000454824 CICQ96RK0 1608 aaPredicted RBP8.85□□□□□ -0.99
NCL-206ENST00000454824 ERVV-1B6SEH8 477 aa8.85□□□□□ -0.99
NCL-206ENST00000454824 POLRMTO00411 1230 aaKnown RBP8.85□□□□□ -0.99
NCL-206ENST00000454824 ECM2O94769 699 aaPredicted RBP8.85□□□□□ -0.99
NCL-206ENST00000454824 TM4SF1P30408 202 aa8.85□□□□□ -0.99
NCL-206ENST00000454824 ST5P78524 1137 aa8.85□□□□□ -0.99
NCL-206ENST00000454824 HNRNPUQ00839 825 aaKnown RBP eCLIP8.85□□□□□ -0.99
NCL-206ENST00000454824 TTLL7Q6ZT98 887 aa8.85□□□□□ -0.99
NCL-206ENST00000454824 WWC3Q9ULE0 1092 aa8.85□□□□□ -0.99
NCL-206ENST00000454824 MAP3K15Q6ZN16 1313 aa8.84□□□□□ -0.99
NCL-206ENST00000454824 A0A0G2JLW4 131 aa8.84□□□□□ -0.99
NCL-206ENST00000454824 E9PSI1 815 aa8.84□□□□□ -0.99
NCL-206ENST00000454824 TCERG1O14776 1098 aaKnown RBP8.84□□□□□ -0.99
NCL-206ENST00000454824 DDX58O95786 925 aaKnown RBP8.84□□□□□ -0.99
NCL-206ENST00000454824 GPTP24298 496 aa8.84□□□□□ -0.99
NCL-206ENST00000454824 MNX1P50219 401 aaPredicted RBP8.84□□□□□ -0.99
NCL-206ENST00000454824 EXOSC9Q06265 439 aaKnown RBP8.84□□□□□ -0.99
NCL-206ENST00000454824 DDR1Q08345 913 aa8.84□□□□□ -0.99
NCL-206ENST00000454824 HLFQ16534 295 aa8.84□□□□□ -0.99
NCL-206ENST00000454824 PROSER3Q2NL68 480 aa8.84□□□□□ -0.99
NCL-206ENST00000454824 TPTE2Q6XPS3 522 aa8.84□□□□□ -0.99
NCL-206ENST00000454824 RIC3Q7Z5B4 369 aa8.84□□□□□ -0.99
NCL-206ENST00000454824 TSPYL6Q8N831 410 aa8.84□□□□□ -0.99
NCL-206ENST00000454824 CNBD1Q8NA66 436 aa8.84□□□□□ -0.99
NCL-206ENST00000454824 NLGN2Q8NFZ4 835 aa8.84□□□□□ -0.99
NCL-206ENST00000454824 BCL2L12Q9HB09 334 aa8.84□□□□□ -0.99
NCL-206ENST00000454824 FANCIQ9NVI1 1328 aa8.83□□□□□ -1
NCL-206ENST00000454824 C4AP0C0L4 1744 aa8.83□□□□□ -1
NCL-206ENST00000454824 TGFB2P61812 414 aa8.83□□□□□ -1
NCL-206ENST00000454824 PDIA6Q15084 440 aa8.83□□□□□ -1
NCL-206ENST00000454824 HSP90AB3PQ58FF7 597 aa8.83□□□□□ -1
NCL-206ENST00000454824 ANKRD13DQ6ZTN6 518 aa8.83□□□□□ -1
NCL-206ENST00000454824 PPP1R42Q7Z4L9 355 aa8.83□□□□□ -1
NCL-206ENST00000454824 CCDC24Q8N4L8 307 aa8.83□□□□□ -1
NCL-206ENST00000454824 NYXQ9GZU5 481 aa8.83□□□□□ -1
NCL-206ENST00000454824 CIZ1Q9ULV3 898 aaPredicted RBP8.83□□□□□ -1
NCL-206ENST00000454824 LAMB4A4D0S4 1761 aa8.83□□□□□ -1
NCL-206ENST00000454824 CARMIL3Q8ND23 1372 aa8.83□□□□□ -1
NCL-206ENST00000454824 H0YIN7 160 aa8.82□□□□□ -1
NCL-206ENST00000454824 RGL2O15211 777 aa8.82□□□□□ -1
NCL-206ENST00000454824 PDE6BP35913 854 aa8.82□□□□□ -1
NCL-206ENST00000454824 NUBP1P53384 320 aa8.82□□□□□ -1
NCL-206ENST00000454824 GIGYF2Q6Y7W6 1299 aaKnown RBP8.82□□□□□ -1
NCL-206ENST00000454824 PLBD2Q8NHP8 589 aa8.82□□□□□ -1
NCL-206ENST00000454824 ZNF622Q969S3 477 aaKnown RBP eCLIP8.82□□□□□ -12e-24■■■■□ 23.5
NCL-206ENST00000454824 GRIN3BO60391 1043 aa8.81□□□□□ -1
NCL-206ENST00000454824 DPEP1P16444 411 aa8.81□□□□□ -1
NCL-206ENST00000454824 PARP10Q53GL7 1025 aa8.81□□□□□ -1
NCL-206ENST00000454824 C2CD5Q86YS7 1000 aa8.81□□□□□ -1
NCL-206ENST00000454824 BRIP1Q9BX63 1249 aa8.81□□□□□ -1
NCL-206ENST00000454824 PHAXQ9H814 394 aaKnown RBP8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms