RNA–Protein interactions for RNA: ENST00000454233.6

DDX39A-203, Transcript of DExD-box helicase 39A, humanhuman

TSL 3 BASIC

Gene DDX39A, Length 922 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-203ENST00000454233 ZNF316A6NFI3 1004 aaPredicted RBP13.98□□□□□ -0.17
DDX39A-203ENST00000454233 NBPF5PQ86XG9 351 aaPredicted RBP13.98□□□□□ -0.17
DDX39A-203ENST00000454233 ZNF526Q8TF50 670 aaPredicted RBP13.98□□□□□ -0.17
DDX39A-203ENST00000454233 NIP7Q9Y221 180 aaKnown RBP eCLIP13.98□□□□□ -0.17
DDX39A-203ENST00000454233 MYL6BP14649 208 aa13.97□□□□□ -0.17
DDX39A-203ENST00000454233 KIF6Q6ZMV9 814 aa13.97□□□□□ -0.17
DDX39A-203ENST00000454233 CCDC24Q8N4L8 307 aa13.97□□□□□ -0.17
DDX39A-203ENST00000454233 ZNF622Q969S3 477 aaKnown RBP eCLIP13.97□□□□□ -0.171e-9■□□□□ 10.9
DDX39A-203ENST00000454233 LAS1LQ9Y4W2 734 aaKnown RBP13.97□□□□□ -0.17
DDX39A-203ENST00000454233 ERVV-1B6SEH8 477 aa13.96□□□□□ -0.17
DDX39A-203ENST00000454233 EIF2S2P20042 333 aaKnown RBP13.96□□□□□ -0.17
DDX39A-203ENST00000454233 C1QTNF8P60827 252 aa13.96□□□□□ -0.17
DDX39A-203ENST00000454233 TPTE2Q6XPS3 522 aa13.96□□□□□ -0.17
DDX39A-203ENST00000454233 TRIM35Q9UPQ4 493 aa13.96□□□□□ -0.17
DDX39A-203ENST00000454233 DLEC1Q9Y238 1755 aa13.96□□□□□ -0.18
DDX39A-203ENST00000454233 MAP3K15Q6ZN16 1313 aa13.95□□□□□ -0.18
DDX39A-203ENST00000454233 CHL1O00533 1208 aa13.95□□□□□ -0.18
DDX39A-203ENST00000454233 HLFQ16534 295 aa13.95□□□□□ -0.18
DDX39A-203ENST00000454233 C9orf131Q5VYM1 1079 aa13.95□□□□□ -0.18
DDX39A-203ENST00000454233 FAM177BA6PVY3 158 aa13.94□□□□□ -0.18
DDX39A-203ENST00000454233 GTF2E1P29083 439 aaPredicted RBP13.94□□□□□ -0.18
DDX39A-203ENST00000454233 TTLL7Q6ZT98 887 aa13.94□□□□□ -0.18
DDX39A-203ENST00000454233 ANKRD31Q8N7Z5 1873 aa13.94□□□□□ -0.18
DDX39A-203ENST00000454233 CNKSR1Q969H4 720 aa13.94□□□□□ -0.18
DDX39A-203ENST00000454233 RNF181Q9P0P0 153 aa13.94□□□□□ -0.18
DDX39A-203ENST00000454233 APAF1O14727 1248 aa13.93□□□□□ -0.18
DDX39A-203ENST00000454233 ANP32CO43423 234 aa13.93□□□□□ -0.18
DDX39A-203ENST00000454233 STYK1Q6J9G0 422 aa13.93□□□□□ -0.18
DDX39A-203ENST00000454233 MASTLQ96GX5 879 aa13.93□□□□□ -0.18
DDX39A-203ENST00000454233 NYXQ9GZU5 481 aa13.93□□□□□ -0.18
DDX39A-203ENST00000454233 ZBTB3Q9H5J0 574 aa13.93□□□□□ -0.18
DDX39A-203ENST00000454233 SRGNP10124 158 aa13.92□□□□□ -0.18
DDX39A-203ENST00000454233 CALD1Q05682 793 aaKnown RBP13.92□□□□□ -0.18
DDX39A-203ENST00000454233 CFAP44Q96MT7 982 aa13.92□□□□□ -0.18
DDX39A-203ENST00000454233 RASSF7Q02833 373 aa13.91□□□□□ -0.18
DDX39A-203ENST00000454233 GIGYF2Q6Y7W6 1299 aaKnown RBP13.91□□□□□ -0.18
DDX39A-203ENST00000454233 NECTIN2Q92692 538 aa13.91□□□□□ -0.18
DDX39A-203ENST00000454233 ZNF219Q9P2Y4 722 aaPredicted RBP13.91□□□□□ -0.18
DDX39A-203ENST00000454233 COL11A2P13942 1736 aaPredicted RBP13.9□□□□□ -0.18
DDX39A-203ENST00000454233 C21orf2O43822 256 aa13.9□□□□□ -0.18
DDX39A-203ENST00000454233 HOXB7P09629 217 aa13.9□□□□□ -0.18
DDX39A-203ENST00000454233 NPR1P16066 1061 aa13.9□□□□□ -0.18
DDX39A-203ENST00000454233 LMNB1P20700 586 aa13.9□□□□□ -0.18
DDX39A-203ENST00000454233 GPTP24298 496 aa13.9□□□□□ -0.18
DDX39A-203ENST00000454233 PDIA6Q15084 440 aa13.9□□□□□ -0.18
DDX39A-203ENST00000454233 KRT24Q2M2I5 525 aa13.9□□□□□ -0.18
DDX39A-203ENST00000454233 NUP98P52948 1817 aa13.9□□□□□ -0.18
DDX39A-203ENST00000454233 SENP3-EIF4A1A0A087X0R7 540 aa13.89□□□□□ -0.19
DDX39A-203ENST00000454233 ANXA1P04083 346 aa13.89□□□□□ -0.19
DDX39A-203ENST00000454233 GNAI1P63096 354 aa13.89□□□□□ -0.19
DDX39A-203ENST00000454233 PROSER3Q2NL68 480 aa13.89□□□□□ -0.19
DDX39A-203ENST00000454233 SOGA3Q5TF21 947 aa13.89□□□□□ -0.19
DDX39A-203ENST00000454233 HDGFL1Q5TGJ6 251 aa13.89□□□□□ -0.19
DDX39A-203ENST00000454233 PRPF40BQ6NWY9 871 aaKnown RBP13.89□□□□□ -0.19
DDX39A-203ENST00000454233 DDX21Q9NR30 783 aaKnown RBP eCLIP13.89□□□□□ -0.19
DDX39A-203ENST00000454233 KDM2BQ8NHM5 1336 aa13.89□□□□□ -0.19
DDX39A-203ENST00000454233 ZC3H4Q9UPT8 1303 aaKnown RBP13.89□□□□□ -0.19
DDX39A-203ENST00000454233 IBTKQ9P2D0 1353 aaPredicted RBP13.88□□□□□ -0.19
DDX39A-203ENST00000454233 KLRG2A4D1S0 409 aaPredicted RBP13.88□□□□□ -0.19
DDX39A-203ENST00000454233 NFKBIEO00221 500 aa13.88□□□□□ -0.19
DDX39A-203ENST00000454233 AIMP1Q12904 312 aaKnown RBP13.88□□□□□ -0.19
DDX39A-203ENST00000454233 CCDC184Q52MB2 194 aa13.88□□□□□ -0.19
DDX39A-203ENST00000454233 PARP10Q53GL7 1025 aa13.88□□□□□ -0.19
DDX39A-203ENST00000454233 COPS6Q7L5N1 327 aa13.88□□□□□ -0.19
DDX39A-203ENST00000454233 LRP10Q7Z4F1 713 aa13.88□□□□□ -0.19
DDX39A-203ENST00000454233 PPP1R42Q7Z4L9 355 aa13.88□□□□□ -0.19
DDX39A-203ENST00000454233 NUTM1Q86Y26 1132 aa13.88□□□□□ -0.19
DDX39A-203ENST00000454233 ZNF34Q8IZ26 560 aa13.88□□□□□ -0.19
DDX39A-203ENST00000454233 XAGE3Q8WTP9 111 aa13.88□□□□□ -0.19
DDX39A-203ENST00000454233 MRS2Q9HD23 443 aa13.88□□□□□ -0.19
DDX39A-203ENST00000454233 MBIPQ9NS73 344 aa13.88□□□□□ -0.19
DDX39A-203ENST00000454233 IFT57Q9NWB7 429 aa13.88□□□□□ -0.19
DDX39A-203ENST00000454233 SBF1O95248 1867 aa13.88□□□□□ -0.19
DDX39A-203ENST00000454233 KIF3CO14782 793 aa13.87□□□□□ -0.19
DDX39A-203ENST00000454233 ZNF853P0CG23 659 aa13.87□□□□□ -0.19
DDX39A-203ENST00000454233 ERFEQ4G0M1 354 aa13.87□□□□□ -0.19
DDX39A-203ENST00000454233 HSP90AB3PQ58FF7 597 aa13.87□□□□□ -0.19
DDX39A-203ENST00000454233 SUSD4Q5VX71 490 aa13.87□□□□□ -0.19
DDX39A-203ENST00000454233 DUSP27Q5VZP5 1158 aa13.87□□□□□ -0.19
DDX39A-203ENST00000454233 CHPF2Q9P2E5 772 aa13.87□□□□□ -0.19
DDX39A-203ENST00000454233 UBN2Q6ZU65 1347 aa13.87□□□□□ -0.19
DDX39A-203ENST00000454233 ALDH1B1P30837 517 aa13.86□□□□□ -0.19
DDX39A-203ENST00000454233 TAOK3Q9H2K8 898 aa13.86□□□□□ -0.19
DDX39A-203ENST00000454233 NMRK2Q9NPI5 230 aa13.86□□□□□ -0.19
DDX39A-203ENST00000454233 DBF4Q9UBU7 674 aaPredicted RBP13.86□□□□□ -0.19
DDX39A-203ENST00000454233 LTBP3Q9NS15 1303 aa13.86□□□□□ -0.19
DDX39A-203ENST00000454233 SLX4Q8IY92 1834 aa13.85□□□□□ -0.19
DDX39A-203ENST00000454233 ABCC12Q96J65 1359 aa13.85□□□□□ -0.19
DDX39A-203ENST00000454233 CACNA1SQ13698 1873 aa13.85□□□□□ -0.19
DDX39A-203ENST00000454233 NTSR2O95665 410 aa13.85□□□□□ -0.19
DDX39A-203ENST00000454233 CCDC93Q567U6 631 aa13.85□□□□□ -0.19
DDX39A-203ENST00000454233 C16orf71Q8IYS4 520 aaPredicted RBP13.85□□□□□ -0.19
DDX39A-203ENST00000454233 RPGRQ92834 1020 aaKnown RBP13.85□□□□□ -0.19
DDX39A-203ENST00000454233 UTP14AQ9BVJ6 771 aaKnown RBP13.85□□□□□ -0.19
DDX39A-203ENST00000454233 ARFGEF2Q9Y6D5 1785 aa13.85□□□□□ -0.19
DDX39A-203ENST00000454233 RIC1Q4ADV7 1423 aa13.84□□□□□ -0.19
DDX39A-203ENST00000454233 PRELPP51888 382 aa13.84□□□□□ -0.19
DDX39A-203ENST00000454233 CRY2Q49AN0 593 aa13.84□□□□□ -0.19
DDX39A-203ENST00000454233 CHMP4AQ9BY43 222 aa13.84□□□□□ -0.19
DDX39A-203ENST00000454233 HYPKQ9NX55 129 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms