RNA–Protein interactions for RNA: ENST00000453580.1

TNFRSF4-202, Transcript of TNF receptor superfamily member 4, humanhuman

TSL 3

Gene TNFRSF4, Length 393 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF4-202ENST00000453580 C9orf131Q5VYM1 1079 aa22.39■■□□□ 1.17
TNFRSF4-202ENST00000453580 KIF6Q6ZMV9 814 aa22.39■■□□□ 1.17
TNFRSF4-202ENST00000453580 CNKSR1Q969H4 720 aa22.39■■□□□ 1.17
TNFRSF4-202ENST00000453580 ANKRD31Q8N7Z5 1873 aa22.39■■□□□ 1.17
TNFRSF4-202ENST00000453580 SENP3-EIF4A1A0A087X0R7 540 aa22.38■■□□□ 1.17
TNFRSF4-202ENST00000453580 ERVV-1B6SEH8 477 aa22.38■■□□□ 1.17
TNFRSF4-202ENST00000453580 ZNF622Q969S3 477 aaKnown RBP eCLIP22.38■■□□□ 1.17
TNFRSF4-202ENST00000453580 THUMPD2Q9BTF0 503 aaKnown RBP22.38■■□□□ 1.17
TNFRSF4-202ENST00000453580 NIP7Q9Y221 180 aaKnown RBP eCLIP22.38■■□□□ 1.17
TNFRSF4-202ENST00000453580 KDM2BQ8NHM5 1336 aa22.37■■□□□ 1.17
TNFRSF4-202ENST00000453580 SBF1O95248 1867 aa22.37■■□□□ 1.17
TNFRSF4-202ENST00000453580 SOGA3Q5TF21 947 aa22.37■■□□□ 1.17
TNFRSF4-202ENST00000453580 RNF181Q9P0P0 153 aa22.37■■□□□ 1.17
TNFRSF4-202ENST00000453580 STYK1Q6J9G0 422 aa22.36■■□□□ 1.17
TNFRSF4-202ENST00000453580 LMNB1P20700 586 aa22.35■■□□□ 1.17
TNFRSF4-202ENST00000453580 GTF2E1P29083 439 aaPredicted RBP22.35■■□□□ 1.17
TNFRSF4-202ENST00000453580 MASTLQ96GX5 879 aa22.35■■□□□ 1.17
TNFRSF4-202ENST00000453580 NYXQ9GZU5 481 aa22.35■■□□□ 1.17
TNFRSF4-202ENST00000453580 RRP7AQ9Y3A4 280 aaKnown RBP22.35■■□□□ 1.17
TNFRSF4-202ENST00000453580 MAP3K15Q6ZN16 1313 aa22.33■■□□□ 1.17
TNFRSF4-202ENST00000453580 NEUROD2Q15784 382 aa22.33■■□□□ 1.17
TNFRSF4-202ENST00000453580 NUP98P52948 1817 aa22.32■■□□□ 1.16
TNFRSF4-202ENST00000453580 SRGNP10124 158 aa22.32■■□□□ 1.16
TNFRSF4-202ENST00000453580 CCDC146Q8IYE0 955 aa22.32■■□□□ 1.16
TNFRSF4-202ENST00000453580 NGEFQ8N5V2 710 aa22.32■■□□□ 1.16
TNFRSF4-202ENST00000453580 ADAMTS8Q9UP79 889 aa22.32■■□□□ 1.16
TNFRSF4-202ENST00000453580 ARFGEF2Q9Y6D5 1785 aa22.31■■□□□ 1.16
TNFRSF4-202ENST00000453580 MYL6BP14649 208 aa22.31■■□□□ 1.16
TNFRSF4-202ENST00000453580 KIF3CO14782 793 aa22.3■■□□□ 1.16
TNFRSF4-202ENST00000453580 TOMM70O94826 608 aa22.3■■□□□ 1.16
TNFRSF4-202ENST00000453580 NPR1P16066 1061 aa22.3■■□□□ 1.16
TNFRSF4-202ENST00000453580 CALD1Q05682 793 aaKnown RBP22.3■■□□□ 1.16
TNFRSF4-202ENST00000453580 C16orf71Q8IYS4 520 aaPredicted RBP22.3■■□□□ 1.16
TNFRSF4-202ENST00000453580 COL11A2P13942 1736 aaPredicted RBP22.3■■□□□ 1.16
TNFRSF4-202ENST00000453580 IBTKQ9P2D0 1353 aaPredicted RBP22.29■■□□□ 1.16
TNFRSF4-202ENST00000453580 HLFQ16534 295 aa22.29■■□□□ 1.16
TNFRSF4-202ENST00000453580 CCDC24Q8N4L8 307 aa22.29■■□□□ 1.16
TNFRSF4-202ENST00000453580 CCDC88AQ3V6T2 1871 aa22.28■■□□□ 1.16
TNFRSF4-202ENST00000453580 KLRG2A4D1S0 409 aaPredicted RBP22.28■■□□□ 1.16
TNFRSF4-202ENST00000453580 CHL1O00533 1208 aa22.28■■□□□ 1.16
TNFRSF4-202ENST00000453580 EIF2S2P20042 333 aaKnown RBP22.28■■□□□ 1.16
TNFRSF4-202ENST00000453580 ALDH1B1P30837 517 aa22.28■■□□□ 1.16
TNFRSF4-202ENST00000453580 LTBP3Q9NS15 1303 aa22.28■■□□□ 1.16
TNFRSF4-202ENST00000453580 TNRC6CQ9HCJ0 1690 aaKnown RBP22.27■■□□□ 1.16
TNFRSF4-202ENST00000453580 C21orf2O43822 256 aa22.27■■□□□ 1.16
TNFRSF4-202ENST00000453580 HOXB7P09629 217 aa22.27■■□□□ 1.16
TNFRSF4-202ENST00000453580 PRPF40BQ6NWY9 871 aaKnown RBP22.27■■□□□ 1.16
TNFRSF4-202ENST00000453580 GIGYF2Q6Y7W6 1299 aaKnown RBP22.27■■□□□ 1.16
TNFRSF4-202ENST00000453580 FER1L6Q2WGJ9 1857 aa22.26■■□□□ 1.15
TNFRSF4-202ENST00000453580 RASSF7Q02833 373 aa22.26■■□□□ 1.15
TNFRSF4-202ENST00000453580 PARP10Q53GL7 1025 aa22.26■■□□□ 1.15
TNFRSF4-202ENST00000453580 DPY19L2Q6NUT2 758 aa22.26■■□□□ 1.15
TNFRSF4-202ENST00000453580 PPP1R42Q7Z4L9 355 aa22.26■■□□□ 1.15
TNFRSF4-202ENST00000453580 TAOK3Q9H2K8 898 aa22.26■■□□□ 1.15
TNFRSF4-202ENST00000453580 TRIM35Q9UPQ4 493 aa22.26■■□□□ 1.15
TNFRSF4-202ENST00000453580 LAS1LQ9Y4W2 734 aaKnown RBP22.26■■□□□ 1.15
TNFRSF4-202ENST00000453580 CACNA1SQ13698 1873 aa22.26■■□□□ 1.15
TNFRSF4-202ENST00000453580 HSPA6P17066 643 aa22.25■■□□□ 1.15
TNFRSF4-202ENST00000453580 HSP90AB3PQ58FF7 597 aa22.25■■□□□ 1.15
TNFRSF4-202ENST00000453580 TTLL7Q6ZT98 887 aa22.25■■□□□ 1.15
TNFRSF4-202ENST00000453580 CFAP44Q96MT7 982 aa22.25■■□□□ 1.15
TNFRSF4-202ENST00000453580 CHMP4AQ9BY43 222 aa22.25■■□□□ 1.15
TNFRSF4-202ENST00000453580 ZBTB3Q9H5J0 574 aa22.25■■□□□ 1.15
TNFRSF4-202ENST00000453580 DICER1Q9UPY3 1922 aaKnown RBP22.25■■□□□ 1.15
TNFRSF4-202ENST00000453580 FAM177BA6PVY3 158 aa22.24■■□□□ 1.15
TNFRSF4-202ENST00000453580 NFKBIEO00221 500 aa22.24■■□□□ 1.15
TNFRSF4-202ENST00000453580 SLX4Q8IY92 1834 aa22.24■■□□□ 1.15
TNFRSF4-202ENST00000453580 RIC1Q4ADV7 1423 aa22.23■■□□□ 1.15
TNFRSF4-202ENST00000453580 CCDC93Q567U6 631 aa22.23■■□□□ 1.15
TNFRSF4-202ENST00000453580 RBM46Q8TBY0 533 aaKnown RBP22.23■■□□□ 1.15
TNFRSF4-202ENST00000453580 NMRK2Q9NPI5 230 aa22.23■■□□□ 1.15
TNFRSF4-202ENST00000453580 ZNF219Q9P2Y4 722 aaPredicted RBP22.23■■□□□ 1.15
TNFRSF4-202ENST00000453580 RNF123Q5XPI4 1314 aa22.23■■□□□ 1.15
TNFRSF4-202ENST00000453580 TIAM2Q8IVF5 1701 aa22.23■■□□□ 1.15
TNFRSF4-202ENST00000453580 GLTPD2A6NH11 291 aa22.22■■□□□ 1.15
TNFRSF4-202ENST00000453580 GRIPAP1Q4V328 841 aa22.22■■□□□ 1.15
TNFRSF4-202ENST00000453580 ZNF34Q8IZ26 560 aa22.22■■□□□ 1.15
TNFRSF4-202ENST00000453580 RTKN2Q8IZC4 609 aa22.22■■□□□ 1.15
TNFRSF4-202ENST00000453580 DDX21Q9NR30 783 aaKnown RBP eCLIP22.22■■□□□ 1.15
TNFRSF4-202ENST00000453580 GNAI1P63096 354 aa22.21■■□□□ 1.15
TNFRSF4-202ENST00000453580 PDIA6Q15084 440 aa22.21■■□□□ 1.15
TNFRSF4-202ENST00000453580 ERFEQ4G0M1 354 aa22.21■■□□□ 1.15
TNFRSF4-202ENST00000453580 GPTP24298 496 aa22.2■■□□□ 1.14
TNFRSF4-202ENST00000453580 CC2D2BQ6DHV5 1058 aa22.2■■□□□ 1.14
TNFRSF4-202ENST00000453580 RPGRQ92834 1020 aaKnown RBP22.2■■□□□ 1.14
TNFRSF4-202ENST00000453580 APAF1O14727 1248 aa22.19■■□□□ 1.14
TNFRSF4-202ENST00000453580 VEGFAP15692 232 aaPredicted RBP22.19■■□□□ 1.14
TNFRSF4-202ENST00000453580 FSTL1Q12841 308 aa22.19■■□□□ 1.14
TNFRSF4-202ENST00000453580 CRY2Q49AN0 593 aa22.19■■□□□ 1.14
TNFRSF4-202ENST00000453580 HDGFL1Q5TGJ6 251 aa22.19■■□□□ 1.14
TNFRSF4-202ENST00000453580 RRAGCQ9HB90 399 aa22.19■■□□□ 1.14
TNFRSF4-202ENST00000453580 DBF4Q9UBU7 674 aaPredicted RBP22.19■■□□□ 1.14
TNFRSF4-202ENST00000453580 ZNF316A6NFI3 1004 aaPredicted RBP22.18■■□□□ 1.14
TNFRSF4-202ENST00000453580 APLP1P51693 650 aa22.18■■□□□ 1.14
TNFRSF4-202ENST00000453580 COPS6Q7L5N1 327 aa22.18■■□□□ 1.14
TNFRSF4-202ENST00000453580 LRP10Q7Z4F1 713 aa22.18■■□□□ 1.14
TNFRSF4-202ENST00000453580 TMX4Q9H1E5 349 aaPredicted RBP22.18■■□□□ 1.14
TNFRSF4-202ENST00000453580 IFT57Q9NWB7 429 aa22.18■■□□□ 1.14
TNFRSF4-202ENST00000453580 ANKRD36CQ5JPF3 1778 aa22.17■■□□□ 1.14
TNFRSF4-202ENST00000453580 UBN2Q6ZU65 1347 aa22.17■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms