RNA–Protein interactions for RNA: ENST00000453536.5

RFTN1-207, Transcript of raftlin, lipid raft linker 1, humanhuman

TSL 5

Gene RFTN1, Length 577 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-207ENST00000453536 SLC51AQ86UW1 340 aa18.6■□□□□ 0.57
RFTN1-207ENST00000453536 ARFGEF2Q9Y6D5 1785 aa18.6■□□□□ 0.57
RFTN1-207ENST00000453536 NEFMP07197 916 aa18.59■□□□□ 0.57
RFTN1-207ENST00000453536 PROSER3Q2NL68 480 aa18.59■□□□□ 0.57
RFTN1-207ENST00000453536 NECTIN2Q92692 538 aa18.59■□□□□ 0.57
RFTN1-207ENST00000453536 TRIM35Q9UPQ4 493 aa18.59■□□□□ 0.57
RFTN1-207ENST00000453536 C9orf131Q5VYM1 1079 aa18.58■□□□□ 0.56
RFTN1-207ENST00000453536 TSPYL4Q9UJ04 414 aa18.58■□□□□ 0.56
RFTN1-207ENST00000453536 FER1L6Q2WGJ9 1857 aa18.58■□□□□ 0.56
RFTN1-207ENST00000453536 CEP350Q5VT06 3117 aa18.57■□□□□ 0.56
RFTN1-207ENST00000453536 ZNF428Q96B54 188 aa18.57■□□□□ 0.56
RFTN1-207ENST00000453536 GPBP1L1Q9HC44 474 aaPredicted RBP18.57■□□□□ 0.56
RFTN1-207ENST00000453536 ABCC12Q96J65 1359 aa18.56■□□□□ 0.56
RFTN1-207ENST00000453536 EIF2S2P20042 333 aaKnown RBP18.55■□□□□ 0.56
RFTN1-207ENST00000453536 WDR43Q15061 677 aaKnown RBP eCLIP18.55■□□□□ 0.56
RFTN1-207ENST00000453536 CNBD1Q8NA66 436 aa18.55■□□□□ 0.56
RFTN1-207ENST00000453536 ZNF622Q969S3 477 aaKnown RBP eCLIP18.55■□□□□ 0.56
RFTN1-207ENST00000453536 SETDB2Q96T68 719 aa18.55■□□□□ 0.56
RFTN1-207ENST00000453536 ZBTB3Q9H5J0 574 aa18.55■□□□□ 0.56
RFTN1-207ENST00000453536 NMRK2Q9NPI5 230 aa18.55■□□□□ 0.56
RFTN1-207ENST00000453536 LAS1LQ9Y4W2 734 aaKnown RBP18.55■□□□□ 0.56
RFTN1-207ENST00000453536 KIF3CO14782 793 aa18.54■□□□□ 0.56
RFTN1-207ENST00000453536 PDIA6Q15084 440 aa18.54■□□□□ 0.56
RFTN1-207ENST00000453536 OLFM4Q6UX06 510 aa18.54■□□□□ 0.56
RFTN1-207ENST00000453536 LRP10Q7Z4F1 713 aa18.54■□□□□ 0.56
RFTN1-207ENST00000453536 RUNDC1Q96C34 613 aa18.54■□□□□ 0.56
RFTN1-207ENST00000453536 RNF181Q9P0P0 153 aa18.54■□□□□ 0.56
RFTN1-207ENST00000453536 NIP7Q9Y221 180 aaKnown RBP eCLIP18.54■□□□□ 0.56
RFTN1-207ENST00000453536 ANKRD36CQ5JPF3 1778 aa18.54■□□□□ 0.56
RFTN1-207ENST00000453536 UBN2Q6ZU65 1347 aa18.53■□□□□ 0.56
RFTN1-207ENST00000453536 NFKBIEO00221 500 aa18.53■□□□□ 0.56
RFTN1-207ENST00000453536 GPTP24298 496 aa18.53■□□□□ 0.56
RFTN1-207ENST00000453536 NUTM1Q86Y26 1132 aa18.53■□□□□ 0.56
RFTN1-207ENST00000453536 LAMB2P55268 1798 aa18.53■□□□□ 0.56
RFTN1-207ENST00000453536 H0YIN7 160 aa18.52■□□□□ 0.56
RFTN1-207ENST00000453536 NPM2Q86SE8 214 aaKnown RBP18.52■□□□□ 0.56
RFTN1-207ENST00000453536 NBPF5PQ86XG9 351 aaPredicted RBP18.52■□□□□ 0.56
RFTN1-207ENST00000453536 PNISRQ8TF01 805 aaKnown RBP18.52■□□□□ 0.56
RFTN1-207ENST00000453536 DICER1Q9UPY3 1922 aaKnown RBP18.52■□□□□ 0.56
RFTN1-207ENST00000453536 C21orf2O43822 256 aa18.51■□□□□ 0.55
RFTN1-207ENST00000453536 TTLL6Q8N841 843 aa18.51■□□□□ 0.55
RFTN1-207ENST00000453536 BRIP1Q9BX63 1249 aa18.51■□□□□ 0.55
RFTN1-207ENST00000453536 PNNQ9H307 717 aaKnown RBP18.51■□□□□ 0.55
RFTN1-207ENST00000453536 TAF1P21675 1872 aa18.51■□□□□ 0.55
RFTN1-207ENST00000453536 MAP3K15Q6ZN16 1313 aa18.5■□□□□ 0.55
RFTN1-207ENST00000453536 APAF1O14727 1248 aa18.5■□□□□ 0.55
RFTN1-207ENST00000453536 NPHP1O15259 732 aa18.5■□□□□ 0.55
RFTN1-207ENST00000453536 SRGNP10124 158 aa18.49■□□□□ 0.55
RFTN1-207ENST00000453536 C3orf67Q6ZVT6 689 aa18.49■□□□□ 0.55
RFTN1-207ENST00000453536 CHL1O00533 1208 aa18.48■□□□□ 0.55
RFTN1-207ENST00000453536 ST5P78524 1137 aa18.48■□□□□ 0.55
RFTN1-207ENST00000453536 ERFEQ4G0M1 354 aa18.48■□□□□ 0.55
RFTN1-207ENST00000453536 PDE6BP35913 854 aa18.47■□□□□ 0.55
RFTN1-207ENST00000453536 PRPF40BQ6NWY9 871 aaKnown RBP18.47■□□□□ 0.55
RFTN1-207ENST00000453536 CLEC4GQ6UXB4 293 aa18.47■□□□□ 0.55
RFTN1-207ENST00000453536 COL4A1P02462 1669 aa18.47■□□□□ 0.55
RFTN1-207ENST00000453536 AIMP1Q12904 312 aaKnown RBP18.46■□□□□ 0.55
RFTN1-207ENST00000453536 SUSD4Q5VX71 490 aa18.46■□□□□ 0.55
RFTN1-207ENST00000453536 ZNF652Q9Y2D9 606 aa18.46■□□□□ 0.55
RFTN1-207ENST00000453536 KIF6Q6ZMV9 814 aa18.45■□□□□ 0.54
RFTN1-207ENST00000453536 SYNE4Q8N205 404 aa18.45■□□□□ 0.54
RFTN1-207ENST00000453536 XAGE3Q8WTP9 111 aa18.45■□□□□ 0.54
RFTN1-207ENST00000453536 MBIPQ9NS73 344 aa18.45■□□□□ 0.54
RFTN1-207ENST00000453536 CHPF2Q9P2E5 772 aa18.45■□□□□ 0.54
RFTN1-207ENST00000453536 LMOD3Q0VAK6 560 aa18.44■□□□□ 0.54
RFTN1-207ENST00000453536 DDX60Q8IY21 1712 aaKnown RBP18.43■□□□□ 0.54
RFTN1-207ENST00000453536 ZNF316A6NFI3 1004 aaPredicted RBP18.43■□□□□ 0.54
RFTN1-207ENST00000453536 COPS6Q7L5N1 327 aa18.43■□□□□ 0.54
RFTN1-207ENST00000453536 ZNF34Q8IZ26 560 aa18.43■□□□□ 0.54
RFTN1-207ENST00000453536 MASTLQ96GX5 879 aa18.43■□□□□ 0.54
RFTN1-207ENST00000453536 COL4A5P29400 1685 aa18.43■□□□□ 0.54
RFTN1-207ENST00000453536 ERVV-1B6SEH8 477 aa18.42■□□□□ 0.54
RFTN1-207ENST00000453536 ELL2O00472 640 aaPredicted RBP18.42■□□□□ 0.54
RFTN1-207ENST00000453536 NTSR2O95665 410 aa18.42■□□□□ 0.54
RFTN1-207ENST00000453536 STYK1Q6J9G0 422 aa18.42■□□□□ 0.54
RFTN1-207ENST00000453536 C7orf43Q8WVR3 580 aa18.42■□□□□ 0.54
RFTN1-207ENST00000453536 RRAGCQ9HB90 399 aa18.42■□□□□ 0.54
RFTN1-207ENST00000453536 TPTE2Q6XPS3 522 aa18.41■□□□□ 0.54
RFTN1-207ENST00000453536 GIGYF2Q6Y7W6 1299 aaKnown RBP18.41■□□□□ 0.54
RFTN1-207ENST00000453536 SNED1Q8TER0 1413 aa18.4■□□□□ 0.54
RFTN1-207ENST00000453536 KLRG2A4D1S0 409 aaPredicted RBP18.4■□□□□ 0.54
RFTN1-207ENST00000453536 ZNF853P0CG23 659 aa18.4■□□□□ 0.54
RFTN1-207ENST00000453536 LMNB1P20700 586 aa18.4■□□□□ 0.54
RFTN1-207ENST00000453536 ERBB4Q15303 1308 aa18.4■□□□□ 0.54
RFTN1-207ENST00000453536 TCERG1O14776 1098 aaKnown RBP18.39■□□□□ 0.53
RFTN1-207ENST00000453536 GTF2E1P29083 439 aaPredicted RBP18.39■□□□□ 0.53
RFTN1-207ENST00000453536 ZEB1P37275 1124 aaPredicted RBP18.39■□□□□ 0.53
RFTN1-207ENST00000453536 HTRA3P83110 453 aa18.39■□□□□ 0.53
RFTN1-207ENST00000453536 HDGFL1Q5TGJ6 251 aa18.39■□□□□ 0.53
RFTN1-207ENST00000453536 DUSP27Q5VZP5 1158 aa18.39■□□□□ 0.53
RFTN1-207ENST00000453536 CNKSR1Q969H4 720 aa18.39■□□□□ 0.53
RFTN1-207ENST00000453536 NPR1P16066 1061 aa18.38■□□□□ 0.53
RFTN1-207ENST00000453536 C8orf58Q8NAV2 365 aa18.38■□□□□ 0.53
RFTN1-207ENST00000453536 TSR2Q969E8 191 aaKnown RBP18.38■□□□□ 0.53
RFTN1-207ENST00000453536 CFAP44Q96MT7 982 aa18.38■□□□□ 0.53
RFTN1-207ENST00000453536 BABAM1Q9NWV8 329 aa18.38■□□□□ 0.53
RFTN1-207ENST00000453536 POTECB2RU33 542 aa18.37■□□□□ 0.53
RFTN1-207ENST00000453536 TSPYL6Q8N831 410 aa18.37■□□□□ 0.53
RFTN1-207ENST00000453536 TAOK3Q9H2K8 898 aa18.37■□□□□ 0.53
RFTN1-207ENST00000453536 DDX21Q9NR30 783 aaKnown RBP eCLIP18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms