RNA–Protein interactions for RNA: ENST00000453306.4

VCX3B-204, Transcript of variable charge X-linked 3B, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3B, Length 868 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3B-204ENST00000453306 SNRPA1P09661 255 aaKnown RBP20.3■□□□□ 0.84
VCX3B-204ENST00000453306 NARFQ9UHQ1 456 aa20.3■□□□□ 0.84
VCX3B-204ENST00000453306 UBR2Q8IWV8 1755 aa20.29■□□□□ 0.84
VCX3B-204ENST00000453306 C9orf131Q5VYM1 1079 aa20.29■□□□□ 0.84
VCX3B-204ENST00000453306 COL15A1P39059 1388 aa20.29■□□□□ 0.84
VCX3B-204ENST00000453306 STARD3NLO95772 234 aa20.28■□□□□ 0.84
VCX3B-204ENST00000453306 A1BGP04217 495 aa20.28■□□□□ 0.84
VCX3B-204ENST00000453306 MYH16Q9H6N6 1097 aa20.28■□□□□ 0.84
VCX3B-204ENST00000453306 BRCA1P38398 1863 aaKnown RBP20.28■□□□□ 0.84
VCX3B-204ENST00000453306 NBPF26B4DH59 902 aa20.27■□□□□ 0.84
VCX3B-204ENST00000453306 VAMP4O75379 141 aa20.27■□□□□ 0.84
VCX3B-204ENST00000453306 PIP4K2AP48426 406 aaPredicted RBP20.27■□□□□ 0.84
VCX3B-204ENST00000453306 APLP1P51693 650 aa20.27■□□□□ 0.84
VCX3B-204ENST00000453306 NBPF10Q6P3W6 841 aaKnown RBP20.27■□□□□ 0.84
VCX3B-204ENST00000453306 C16orf71Q8IYS4 520 aaPredicted RBP20.27■□□□□ 0.84
VCX3B-204ENST00000453306 NBPF15Q8N660 670 aa20.27■□□□□ 0.84
VCX3B-204ENST00000453306 ARFGEF1Q9Y6D6 1849 aa20.27■□□□□ 0.84
VCX3B-204ENST00000453306 CHRNA5P30532 468 aa20.26■□□□□ 0.83
VCX3B-204ENST00000453306 NECTIN2Q92692 538 aa20.26■□□□□ 0.83
VCX3B-204ENST00000453306 ZBTB1Q9Y2K1 713 aa20.26■□□□□ 0.83
VCX3B-204ENST00000453306 KDM2BQ8NHM5 1336 aa20.26■□□□□ 0.83
VCX3B-204ENST00000453306 A0A087WZG4 1122 aa20.25■□□□□ 0.83
VCX3B-204ENST00000453306 NFIXQ14938 502 aa20.25■□□□□ 0.83
VCX3B-204ENST00000453306 PDIA6Q15084 440 aa20.25■□□□□ 0.83
VCX3B-204ENST00000453306 TEX13AQ9BXU3 409 aaPredicted RBP20.25■□□□□ 0.83
VCX3B-204ENST00000453306 RNF181Q9P0P0 153 aa20.25■□□□□ 0.83
VCX3B-204ENST00000453306 EIF2S2P20042 333 aaKnown RBP20.24■□□□□ 0.83
VCX3B-204ENST00000453306 CANXP27824 592 aaKnown RBP20.24■□□□□ 0.83
VCX3B-204ENST00000453306 PROSER3Q2NL68 480 aa20.24■□□□□ 0.83
VCX3B-204ENST00000453306 TCERG1O14776 1098 aaKnown RBP20.23■□□□□ 0.83
VCX3B-204ENST00000453306 SERPINB2P05120 415 aa20.23■□□□□ 0.83
VCX3B-204ENST00000453306 TWISTNBQ3B726 338 aaPredicted RBP20.23■□□□□ 0.83
VCX3B-204ENST00000453306 LRP10Q7Z4F1 713 aa20.23■□□□□ 0.83
VCX3B-204ENST00000453306 NMRK2Q9NPI5 230 aa20.23■□□□□ 0.83
VCX3B-204ENST00000453306 ANXA1P04083 346 aa20.22■□□□□ 0.83
VCX3B-204ENST00000453306 NPM2Q86SE8 214 aaKnown RBP20.22■□□□□ 0.83
VCX3B-204ENST00000453306 RBM46Q8TBY0 533 aaKnown RBP20.22■□□□□ 0.83
VCX3B-204ENST00000453306 HOXB7P09629 217 aa20.21■□□□□ 0.83
VCX3B-204ENST00000453306 EIF5P55010 431 aaKnown RBP20.2■□□□□ 0.82
VCX3B-204ENST00000453306 TTLL6Q8N841 843 aa20.2■□□□□ 0.82
VCX3B-204ENST00000453306 ZC3H4Q9UPT8 1303 aaKnown RBP20.2■□□□□ 0.82
VCX3B-204ENST00000453306 H0YIN7 160 aa20.19■□□□□ 0.82
VCX3B-204ENST00000453306 HDGFL1Q5TGJ6 251 aa20.19■□□□□ 0.82
VCX3B-204ENST00000453306 BCL2L12Q9HB09 334 aa20.19■□□□□ 0.82
VCX3B-204ENST00000453306 PDZRN3Q9UPQ7 1066 aa20.19■□□□□ 0.82
VCX3B-204ENST00000453306 FSTL1Q12841 308 aa20.18■□□□□ 0.82
VCX3B-204ENST00000453306 C2CD5Q86YS7 1000 aa20.18■□□□□ 0.82
VCX3B-204ENST00000453306 CHPF2Q9P2E5 772 aa20.18■□□□□ 0.82
VCX3B-204ENST00000453306 NRXN2Q9P2S2 1712 aa20.17■□□□□ 0.82
VCX3B-204ENST00000453306 LMNB1P20700 586 aa20.17■□□□□ 0.82
VCX3B-204ENST00000453306 BICDL1Q6ZP65 573 aa20.17■□□□□ 0.82
VCX3B-204ENST00000453306 IL6STP40189 918 aaPredicted RBP20.16■□□□□ 0.82
VCX3B-204ENST00000453306 G2E3Q7L622 706 aa20.16■□□□□ 0.82
VCX3B-204ENST00000453306 AFDNP55196 1824 aaKnown RBP20.16■□□□□ 0.82
VCX3B-204ENST00000453306 MYL6BP14649 208 aa20.15■□□□□ 0.82
VCX3B-204ENST00000453306 PDE6BP35913 854 aa20.15■□□□□ 0.82
VCX3B-204ENST00000453306 RRAGCQ9HB90 399 aa20.15■□□□□ 0.82
VCX3B-204ENST00000453306 DDX21Q9NR30 783 aaKnown RBP eCLIP20.15■□□□□ 0.82
VCX3B-204ENST00000453306 ZNF330Q9Y3S2 320 aaPredicted RBP20.15■□□□□ 0.82
VCX3B-204ENST00000453306 TTLL7Q6ZT98 887 aa20.14■□□□□ 0.81
VCX3B-204ENST00000453306 SSH1Q8WYL5 1049 aa20.14■□□□□ 0.81
VCX3B-204ENST00000453306 BRIP1Q9BX63 1249 aa20.14■□□□□ 0.81
VCX3B-204ENST00000453306 PHAXQ9H814 394 aaKnown RBP20.14■□□□□ 0.81
VCX3B-204ENST00000453306 CARMIL3Q8ND23 1372 aa20.13■□□□□ 0.81
VCX3B-204ENST00000453306 NPHP1O15259 732 aa20.13■□□□□ 0.81
VCX3B-204ENST00000453306 RASSF7Q02833 373 aa20.13■□□□□ 0.81
VCX3B-204ENST00000453306 CCDC30Q5VVM6 783 aa20.13■□□□□ 0.81
VCX3B-204ENST00000453306 TBC1D9BQ66K14 1250 aa20.13■□□□□ 0.81
VCX3B-204ENST00000453306 ERBB4Q15303 1308 aa20.12■□□□□ 0.81
VCX3B-204ENST00000453306 RARSP54136 660 aaKnown RBP20.12■□□□□ 0.81
VCX3B-204ENST00000453306 SETDB2Q96T68 719 aa20.12■□□□□ 0.81
VCX3B-204ENST00000453306 TBC1D2BQ9UPU7 963 aa20.12■□□□□ 0.81
VCX3B-204ENST00000453306 TNRC6CQ9HCJ0 1690 aaKnown RBP20.12■□□□□ 0.81
VCX3B-204ENST00000453306 DLEC1Q9Y238 1755 aa20.11■□□□□ 0.81
VCX3B-204ENST00000453306 SLC4A2P04920 1241 aa20.11■□□□□ 0.81
VCX3B-204ENST00000453306 MRPL50Q8N5N7 158 aaKnown RBP20.11■□□□□ 0.81
VCX3B-204ENST00000453306 DNAJC5GQ8N7S2 189 aa20.11■□□□□ 0.81
VCX3B-204ENST00000453306 SMC1BQ8NDV3 1235 aa20.11■□□□□ 0.81
VCX3B-204ENST00000453306 ZNF622Q969S3 477 aaKnown RBP eCLIP20.11■□□□□ 0.81
VCX3B-204ENST00000453306 BCL2L13Q9BXK5 485 aa20.11■□□□□ 0.81
VCX3B-204ENST00000453306 DBF4Q9UBU7 674 aaPredicted RBP20.11■□□□□ 0.81
VCX3B-204ENST00000453306 SBF1O95248 1867 aa20.1■□□□□ 0.81
VCX3B-204ENST00000453306 GLTPD2A6NH11 291 aa20.1■□□□□ 0.81
VCX3B-204ENST00000453306 COPS6Q7L5N1 327 aa20.1■□□□□ 0.81
VCX3B-204ENST00000453306 XAGE3Q8WTP9 111 aa20.1■□□□□ 0.81
VCX3B-204ENST00000453306 BCAR3O75815 825 aa20.09■□□□□ 0.81
VCX3B-204ENST00000453306 CT47B1P0C2W7 299 aaPredicted RBP20.09■□□□□ 0.81
VCX3B-204ENST00000453306 VEGFAP15692 232 aaPredicted RBP20.09■□□□□ 0.81
VCX3B-204ENST00000453306 ST5P78524 1137 aa20.09■□□□□ 0.81
VCX3B-204ENST00000453306 PRR5LQ6MZQ0 368 aa20.09■□□□□ 0.81
VCX3B-204ENST00000453306 SCN7AQ01118 1682 aa20.08■□□□□ 0.81
VCX3B-204ENST00000453306 CAMTA2O94983 1202 aa20.08■□□□□ 0.81
VCX3B-204ENST00000453306 AIMP1Q12904 312 aaKnown RBP20.08■□□□□ 0.81
VCX3B-204ENST00000453306 DPY19L2Q6NUT2 758 aa20.08■□□□□ 0.81
VCX3B-204ENST00000453306 DZIP3Q86Y13 1208 aaKnown RBP20.08■□□□□ 0.81
VCX3B-204ENST00000453306 CNBD1Q8NA66 436 aa20.08■□□□□ 0.81
VCX3B-204ENST00000453306 LAMB4A4D0S4 1761 aa20.08■□□□□ 0.8
VCX3B-204ENST00000453306 HLFQ16534 295 aa20.07■□□□□ 0.8
VCX3B-204ENST00000453306 HYPKQ9NX55 129 aa20.07■□□□□ 0.8
VCX3B-204ENST00000453306 ZNF652Q9Y2D9 606 aa20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms