RNA–Protein interactions for RNA: ENST00000449544.5

HCG18-238, Transcript of HLA complex group 18, human

TSL 2 BASIC

Gene HCG18, Length 4,262 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HCG18-238	ENST00000449544	C3	P01024	1663 aa		10.35	□□□□□ -0.75
HCG18-238	ENST00000449544	RTL1	A6NKG5	1358 aa		10.34	□□□□□ -0.75
HCG18-238	ENST00000449544	SRGAP3	O43295	1099 aa		10.34	□□□□□ -0.75
HCG18-238	ENST00000449544	MARCH6	O60337	910 aa		10.34	□□□□□ -0.75
HCG18-238	ENST00000449544	CLSTN1	O94985	981 aa		10.34	□□□□□ -0.75
HCG18-238	ENST00000449544	GNAI2	P04899	355 aa		10.34	□□□□□ -0.75
HCG18-238	ENST00000449544	IL6ST	P40189	918 aa	Predicted RBP	10.34	□□□□□ -0.75
HCG18-238	ENST00000449544	PPRC1	Q5VV67	1664 aa	Known RBP	10.34	□□□□□ -0.75
HCG18-238	ENST00000449544	ARHGEF1	Q92888	912 aa	Known RBP	10.34	□□□□□ -0.75
HCG18-238	ENST00000449544	SLIT1	O75093	1534 aa		10.34	□□□□□ -0.75
HCG18-238	ENST00000449544	ARHGAP23	Q9P227	1491 aa		10.34	□□□□□ -0.75
HCG18-238	ENST00000449544	SLC3A2	P08195	630 aa	Known RBP	10.34	□□□□□ -0.75
HCG18-238	ENST00000449544	AMER1	Q5JTC6	1135 aa	Predicted RBP	10.34	□□□□□ -0.75
HCG18-238	ENST00000449544	CC2D2B	Q6DHV5	1058 aa		10.34	□□□□□ -0.75
HCG18-238	ENST00000449544	RILPL2	Q969X0	211 aa		10.34	□□□□□ -0.75
HCG18-238	ENST00000449544	AKAP2	Q9Y2D5	859 aa		10.34	□□□□□ -0.75
HCG18-238	ENST00000449544	IL13	P35225	146 aa		10.34	□□□□□ -0.75
HCG18-238	ENST00000449544	RTKN2	Q8IZC4	609 aa		10.34	□□□□□ -0.75
HCG18-238	ENST00000449544	ANKRD2	Q9GZV1	360 aa		10.34	□□□□□ -0.75
HCG18-238	ENST00000449544	MYO3A	Q8NEV4	1616 aa		10.34	□□□□□ -0.75
HCG18-238	ENST00000449544	FRMPD1	Q5SYB0	1578 aa		10.34	□□□□□ -0.75
HCG18-238	ENST00000449544	PLSCR1	O15162	318 aa		10.33	□□□□□ -0.76
HCG18-238	ENST00000449544	IDH1	O75874	414 aa	Known RBP	10.33	□□□□□ -0.76
HCG18-238	ENST00000449544	FLII	Q13045	1269 aa		10.33	□□□□□ -0.76
HCG18-238	ENST00000449544	PHACTR3	Q96KR7	559 aa		10.33	□□□□□ -0.76
HCG18-238	ENST00000449544	IQSEC3	Q9UPP2	1182 aa	Predicted RBP	10.33	□□□□□ -0.76
HCG18-238	ENST00000449544	LRRFIP2	Q9Y608	721 aa	Known RBP	10.33	□□□□□ -0.76
HCG18-238	ENST00000449544	ATP7B	P35670	1465 aa		10.33	□□□□□ -0.76
HCG18-238	ENST00000449544	IQGAP1	P46940	1657 aa		10.33	□□□□□ -0.76
HCG18-238	ENST00000449544	USP5	P45974	858 aa		10.33	□□□□□ -0.76
HCG18-238	ENST00000449544	WDR63	Q8IWG1	891 aa		10.33	□□□□□ -0.76
HCG18-238	ENST00000449544	DDX21	Q9NR30	783 aa	Known RBP eCLIP	10.33	□□□□□ -0.76
HCG18-238	ENST00000449544	MPHOSPH10	O00566	681 aa	Known RBP	10.33	□□□□□ -0.76
HCG18-238	ENST00000449544	TRDN	Q13061	729 aa		10.33	□□□□□ -0.76
HCG18-238	ENST00000449544	ARHGEF6	Q15052	776 aa		10.33	□□□□□ -0.76
HCG18-238	ENST00000449544	USP16	Q9Y5T5	823 aa		10.33	□□□□□ -0.76
HCG18-238	ENST00000449544	MED14	O60244	1454 aa		10.33	□□□□□ -0.76
HCG18-238	ENST00000449544	CPSF1	Q10570	1443 aa	Known RBP	10.32	□□□□□ -0.76
HCG18-238	ENST00000449544	ADAMTSL3	P82987	1691 aa		10.32	□□□□□ -0.76
HCG18-238	ENST00000449544	DDX24	Q9GZR7	859 aa	Known RBP eCLIP	10.32	□□□□□ -0.76
HCG18-238	ENST00000449544	DDX19B	Q9UMR2	479 aa		10.32	□□□□□ -0.76
HCG18-238	ENST00000449544		F6X3S4	739 aa		10.32	□□□□□ -0.76
HCG18-238	ENST00000449544	MCC	P23508	829 aa		10.32	□□□□□ -0.76
HCG18-238	ENST00000449544	DIAPH3	Q9NSV4	1193 aa		10.32	□□□□□ -0.76
HCG18-238	ENST00000449544	TULP4	Q9NRJ4	1543 aa		10.32	□□□□□ -0.76
HCG18-238	ENST00000449544	GNL2	Q13823	731 aa	Known RBP	10.32	□□□□□ -0.76
HCG18-238	ENST00000449544	ERC1	Q8IUD2	1116 aa		10.32	□□□□□ -0.76
HCG18-238	ENST00000449544	MASTL	Q96GX5	879 aa		10.32	□□□□□ -0.76
HCG18-238	ENST00000449544	COG6	Q9Y2V7	657 aa		10.32	□□□□□ -0.76
HCG18-238	ENST00000449544	POLR3D	P05423	398 aa	Predicted RBP	10.31	□□□□□ -0.76
HCG18-238	ENST00000449544	SBNO2	Q9Y2G9	1366 aa		10.31	□□□□□ -0.76
HCG18-238	ENST00000449544	CDC42BPG	Q6DT37	1551 aa		10.31	□□□□□ -0.76
HCG18-238	ENST00000449544	NPR1	P16066	1061 aa		10.31	□□□□□ -0.76
HCG18-238	ENST00000449544	RPS8	P62241	208 aa	Known RBP	10.31	□□□□□ -0.76
HCG18-238	ENST00000449544	SYNE3	Q6ZMZ3	975 aa		10.31	□□□□□ -0.76
HCG18-238	ENST00000449544	IQGAP3	Q86VI3	1631 aa		10.31	□□□□□ -0.76
HCG18-238	ENST00000449544	ERC2	O15083	957 aa		10.31	□□□□□ -0.76
HCG18-238	ENST00000449544	OTUD7B	Q6GQQ9	843 aa		10.31	□□□□□ -0.76
HCG18-238	ENST00000449544	ATG3	Q9NT62	314 aa		10.31	□□□□□ -0.76
HCG18-238	ENST00000449544	CAPN15	O75808	1086 aa		10.3	□□□□□ -0.76
HCG18-238	ENST00000449544	CHRNA5	P30532	468 aa		10.3	□□□□□ -0.76
HCG18-238	ENST00000449544	DLGAP5	Q15398	846 aa		10.3	□□□□□ -0.76
HCG18-238	ENST00000449544	SPTY2D1	Q68D10	685 aa	Predicted RBP	10.3	□□□□□ -0.76
HCG18-238	ENST00000449544	HELB	Q8NG08	1087 aa	Predicted RBP	10.3	□□□□□ -0.76
HCG18-238	ENST00000449544	NARF	Q9UHQ1	456 aa		10.3	□□□□□ -0.76
HCG18-238	ENST00000449544	SUPT16H	Q9Y5B9	1047 aa	Known RBP	10.3	□□□□□ -0.76
HCG18-238	ENST00000449544	ANKRD45	Q5TZF3	282 aa		10.3	□□□□□ -0.76
HCG18-238	ENST00000449544	IGSF1	Q8N6C5	1336 aa		10.3	□□□□□ -0.76
HCG18-238	ENST00000449544	PPP1R12B	O60237	982 aa	Predicted RBP	10.3	□□□□□ -0.76
HCG18-238	ENST00000449544	KSR2	Q6VAB6	950 aa		10.3	□□□□□ -0.76
HCG18-238	ENST00000449544	ASXL1	Q8IXJ9	1541 aa		10.3	□□□□□ -0.76
HCG18-238	ENST00000449544	KIF22	Q14807	665 aa		10.3	□□□□□ -0.76
HCG18-238	ENST00000449544	LMBR1L	Q6UX01	489 aa		10.3	□□□□□ -0.76
HCG18-238	ENST00000449544	CABP5	Q9NP86	173 aa		10.3	□□□□□ -0.76
HCG18-238	ENST00000449544	BAG3	O95817	575 aa		10.29	□□□□□ -0.76
HCG18-238	ENST00000449544	DIP2A	Q14689	1571 aa		10.29	□□□□□ -0.76
HCG18-238	ENST00000449544	MBIP	Q9NS73	344 aa		10.29	□□□□□ -0.76
HCG18-238	ENST00000449544	CLTCL1	P53675	1640 aa		10.29	□□□□□ -0.76
HCG18-238	ENST00000449544	ERICH2	A1L162	156 aa		10.29	□□□□□ -0.76
HCG18-238	ENST00000449544	AKAP17A	Q02040	695 aa	Known RBP	10.29	□□□□□ -0.76
HCG18-238	ENST00000449544	SMIM5	Q71RC9	77 aa		10.29	□□□□□ -0.76
HCG18-238	ENST00000449544	NACAP1	Q9BZK3	213 aa		10.29	□□□□□ -0.76
HCG18-238	ENST00000449544	KIF24	Q5T7B8	1368 aa		10.29	□□□□□ -0.76
HCG18-238	ENST00000449544	RAD17	O75943	681 aa		10.29	□□□□□ -0.76
HCG18-238	ENST00000449544	C9orf131	Q5VYM1	1079 aa		10.29	□□□□□ -0.76
HCG18-238	ENST00000449544	NOL8	Q76FK4	1167 aa	Known RBP	10.29	□□□□□ -0.76
HCG18-238	ENST00000449544	PLBD2	Q8NHP8	589 aa		10.29	□□□□□ -0.76
HCG18-238	ENST00000449544	HOOK2	Q96ED9	719 aa		10.29	□□□□□ -0.76
HCG18-238	ENST00000449544	JAG2	Q9Y219	1238 aa		10.29	□□□□□ -0.76
HCG18-238	ENST00000449544	PPEF1	O14829	653 aa	Predicted RBP	10.28	□□□□□ -0.76
HCG18-238	ENST00000449544	HLA-DOA	P06340	250 aa		10.28	□□□□□ -0.76
HCG18-238	ENST00000449544	CIAPIN1	Q6FI81	312 aa		10.28	□□□□□ -0.76
HCG18-238	ENST00000449544	DPEP1	P16444	411 aa		10.28	□□□□□ -0.76
HCG18-238	ENST00000449544	DOK7	Q18PE1	504 aa		10.28	□□□□□ -0.76
HCG18-238	ENST00000449544	COL23A1	Q86Y22	540 aa	Predicted RBP	10.28	□□□□□ -0.76
HCG18-238	ENST00000449544	STK11IP	Q8N1F8	1099 aa		10.28	□□□□□ -0.76
HCG18-238	ENST00000449544	C2orf69	Q8N8R5	385 aa		10.28	□□□□□ -0.76
HCG18-238	ENST00000449544	PDE8A	O60658	829 aa		10.27	□□□□□ -0.76
HCG18-238	ENST00000449544	CSAD	Q9Y600	493 aa		10.27	□□□□□ -0.76
HCG18-238	ENST00000449544	BBOX1	O75936	387 aa		10.27	□□□□□ -0.77

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