RNA–Protein interactions for RNA: ENST00000446155.1

HMGB1P48-201, Transcript of high mobility group box 1 pseudogene 48, humanhuman

BASIC

Gene HMGB1P48, Length 598 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P48-201ENST00000446155 IVNS1ABPQ9Y6Y0 642 aa8□□□□□ -1.13
HMGB1P48-201ENST00000446155 DGKZQ13574 1117 aa7.99□□□□□ -1.13
HMGB1P48-201ENST00000446155 ECM1Q16610 540 aa7.99□□□□□ -1.13
HMGB1P48-201ENST00000446155 DBN1Q16643 649 aa7.99□□□□□ -1.13
HMGB1P48-201ENST00000446155 SAMD5Q5TGI4 173 aa7.99□□□□□ -1.13
HMGB1P48-201ENST00000446155 IER5Q5VY09 327 aa7.99□□□□□ -1.13
HMGB1P48-201ENST00000446155 NLRP8Q86W28 1048 aa7.99□□□□□ -1.13
HMGB1P48-201ENST00000446155 AEBP1Q8IUX7 1158 aa7.99□□□□□ -1.13
HMGB1P48-201ENST00000446155 ZNF280CQ8ND82 737 aa7.99□□□□□ -1.13
HMGB1P48-201ENST00000446155 NANOS1Q8WY41 292 aaKnown RBP7.99□□□□□ -1.13
HMGB1P48-201ENST00000446155 ZNF837Q96EG3 531 aaPredicted RBP7.99□□□□□ -1.13
HMGB1P48-201ENST00000446155 KLK14Q9P0G3 267 aa7.99□□□□□ -1.13
HMGB1P48-201ENST00000446155 TGFBR3LH3BV60 316 aa7.98□□□□□ -1.13
HMGB1P48-201ENST00000446155 ICMTO60725 284 aa7.98□□□□□ -1.13
HMGB1P48-201ENST00000446155 ZNF211Q13398 564 aaPredicted RBP7.98□□□□□ -1.13
HMGB1P48-201ENST00000446155 C11orf91Q3C1V1 193 aa7.98□□□□□ -1.13
HMGB1P48-201ENST00000446155 NPAS3Q8IXF0 933 aa7.98□□□□□ -1.13
HMGB1P48-201ENST00000446155 GMCL1Q96IK5 515 aa7.98□□□□□ -1.13
HMGB1P48-201ENST00000446155 HSH2DQ96JZ2 352 aa7.98□□□□□ -1.13
HMGB1P48-201ENST00000446155 SUSD3Q96L08 255 aa7.98□□□□□ -1.13
HMGB1P48-201ENST00000446155 NXF1Q9UBU9 619 aaKnown RBP7.98□□□□□ -1.13
HMGB1P48-201ENST00000446155 H3BM21 787 aa7.97□□□□□ -1.13
HMGB1P48-201ENST00000446155 SF3B2Q13435 895 aaKnown RBP7.97□□□□□ -1.13
HMGB1P48-201ENST00000446155 MTMR3Q13615 1198 aa7.97□□□□□ -1.13
HMGB1P48-201ENST00000446155 ARSJQ5FYB0 599 aaPredicted RBP7.97□□□□□ -1.13
HMGB1P48-201ENST00000446155 BICDL1Q6ZP65 573 aa7.97□□□□□ -1.13
HMGB1P48-201ENST00000446155 RIPOR1Q6ZS17 1223 aa7.97□□□□□ -1.13
HMGB1P48-201ENST00000446155 NUCKS1Q9H1E3 243 aaKnown RBP7.97□□□□□ -1.13
HMGB1P48-201ENST00000446155 NDFIP2Q9NV92 336 aa7.97□□□□□ -1.13
HMGB1P48-201ENST00000446155 STIM2Q9P246 746 aa7.97□□□□□ -1.13
HMGB1P48-201ENST00000446155 SOWAHDA6NJG2 315 aa7.96□□□□□ -1.14
HMGB1P48-201ENST00000446155 H7C1W4 665 aa7.96□□□□□ -1.14
HMGB1P48-201ENST00000446155 FKBP4Q02790 459 aaKnown RBP eCLIP7.96□□□□□ -1.14
HMGB1P48-201ENST00000446155 HIF1AQ16665 826 aa7.96□□□□□ -1.14
HMGB1P48-201ENST00000446155 LRRC69Q6ZNQ3 347 aa7.96□□□□□ -1.14
HMGB1P48-201ENST00000446155 ETFBKMTQ8IXQ9 262 aa7.96□□□□□ -1.14
HMGB1P48-201ENST00000446155 PGBD3Q8N328 593 aa7.96□□□□□ -1.14
HMGB1P48-201ENST00000446155 HCN2Q9UL51 889 aa7.96□□□□□ -1.14
HMGB1P48-201ENST00000446155 VSIG8P0DPA2 414 aa7.95□□□□□ -1.14
HMGB1P48-201ENST00000446155 EFHC2Q5JST6 749 aa7.95□□□□□ -1.14
HMGB1P48-201ENST00000446155 IFT43Q96FT9 208 aa7.95□□□□□ -1.14
HMGB1P48-201ENST00000446155 ZCCHC2Q9C0B9 1178 aaKnown RBP7.95□□□□□ -1.14
HMGB1P48-201ENST00000446155 ANKIB1Q9P2G1 1089 aa7.95□□□□□ -1.14
HMGB1P48-201ENST00000446155 ZBTB39O15060 712 aa7.94□□□□□ -1.14
HMGB1P48-201ENST00000446155 EFSO43281 561 aa7.94□□□□□ -1.14
HMGB1P48-201ENST00000446155 ABL1P00519 1130 aa7.94□□□□□ -1.14
HMGB1P48-201ENST00000446155 FAM157BP0CG42 384 aa7.94□□□□□ -1.14
HMGB1P48-201ENST00000446155 MPSTP25325 297 aa7.94□□□□□ -1.14
HMGB1P48-201ENST00000446155 BRD2P25440 801 aaKnown RBP7.94□□□□□ -1.14
HMGB1P48-201ENST00000446155 TYRO3Q06418 890 aa7.94□□□□□ -1.14
HMGB1P48-201ENST00000446155 ANO2Q9NQ90 1003 aa7.94□□□□□ -1.14
HMGB1P48-201ENST00000446155 H3BRB1 525 aa7.93□□□□□ -1.14
HMGB1P48-201ENST00000446155 TERTO14746 1132 aaKnown RBP7.93□□□□□ -1.14
HMGB1P48-201ENST00000446155 GRNP28799 593 aaKnown RBP7.93□□□□□ -1.14
HMGB1P48-201ENST00000446155 ARHGAP4P98171 946 aa7.93□□□□□ -1.14
HMGB1P48-201ENST00000446155 TRIM26Q12899 539 aaPredicted RBP7.93□□□□□ -1.14
HMGB1P48-201ENST00000446155 FIGNL1Q6PIW4 674 aa7.93□□□□□ -1.14
HMGB1P48-201ENST00000446155 BTLAQ7Z6A9 289 aa7.93□□□□□ -1.14
HMGB1P48-201ENST00000446155 VWA5B2Q8N398 1253 aa7.93□□□□□ -1.14
HMGB1P48-201ENST00000446155 TUT1Q9H6E5 874 aaKnown RBP7.93□□□□□ -1.14
HMGB1P48-201ENST00000446155 PCDHGC4Q9Y5F7 938 aa7.93□□□□□ -1.14
HMGB1P48-201ENST00000446155 OPLAHO14841 1288 aa7.92□□□□□ -1.14
HMGB1P48-201ENST00000446155 MICAL2O94851 1124 aa7.92□□□□□ -1.14
HMGB1P48-201ENST00000446155 INPP5BP32019 993 aa7.92□□□□□ -1.14
HMGB1P48-201ENST00000446155 VEGFBP49765 207 aa7.92□□□□□ -1.14
HMGB1P48-201ENST00000446155 TNP2Q05952 138 aa7.92□□□□□ -1.14
HMGB1P48-201ENST00000446155 TREML1Q86YW5 311 aa7.92□□□□□ -1.14
HMGB1P48-201ENST00000446155 ABTB2Q8N961 1025 aa7.92□□□□□ -1.14
HMGB1P48-201ENST00000446155 GTPBP3Q969Y2 492 aaKnown RBP7.92□□□□□ -1.14
HMGB1P48-201ENST00000446155 ATXN7O15265 892 aaPredicted RBP7.91□□□□□ -1.14
HMGB1P48-201ENST00000446155 BNIP3LO60238 219 aa7.91□□□□□ -1.14
HMGB1P48-201ENST00000446155 FAM13AO94988 1023 aa7.91□□□□□ -1.14
HMGB1P48-201ENST00000446155 RANGAP1P46060 587 aaPredicted RBP7.91□□□□□ -1.14
HMGB1P48-201ENST00000446155 EIF1AXP47813 144 aaKnown RBP7.91□□□□□ -1.14
HMGB1P48-201ENST00000446155 IDH3AP50213 366 aa7.91□□□□□ -1.14
HMGB1P48-201ENST00000446155 KCNQ4P56696 695 aa7.91□□□□□ -1.14
HMGB1P48-201ENST00000446155 NFX1Q12986 1120 aaKnown RBP7.91□□□□□ -1.14
HMGB1P48-201ENST00000446155 LCE2CQ5TA81 110 aa7.91□□□□□ -1.14
HMGB1P48-201ENST00000446155 SV2AQ7L0J3 742 aa7.91□□□□□ -1.14
HMGB1P48-201ENST00000446155 GPR161Q8N6U8 529 aaKnown RBP7.91□□□□□ -1.14
HMGB1P48-201ENST00000446155 ERBB4Q15303 1308 aa7.9□□□□□ -1.14
HMGB1P48-201ENST00000446155 ZAP70P43403 619 aa7.9□□□□□ -1.14
HMGB1P48-201ENST00000446155 SND1Q7KZF4 910 aaKnown RBP eCLIP7.9□□□□□ -1.14
HMGB1P48-201ENST00000446155 GLYCTKQ8IVS8 523 aa7.9□□□□□ -1.14
HMGB1P48-201ENST00000446155 CFHR5Q9BXR6 569 aa7.9□□□□□ -1.14
HMGB1P48-201ENST00000446155 GJA3Q9Y6H8 435 aa7.9□□□□□ -1.14
HMGB1P48-201ENST00000446155 ZBTB7CA1YPR0 619 aa7.89□□□□□ -1.15
HMGB1P48-201ENST00000446155 CDC14CA4D256 554 aa7.89□□□□□ -1.15
HMGB1P48-201ENST00000446155 FZD6O60353 706 aa7.89□□□□□ -1.15
HMGB1P48-201ENST00000446155 MAPTP10636 758 aaKnown RBP7.89□□□□□ -1.15
HMGB1P48-201ENST00000446155 LAMC2Q13753 1193 aa7.89□□□□□ -1.15
HMGB1P48-201ENST00000446155 GAS6Q14393 721 aa7.89□□□□□ -1.15
HMGB1P48-201ENST00000446155 NOM1Q5C9Z4 860 aaKnown RBP7.89□□□□□ -1.15
HMGB1P48-201ENST00000446155 ABHD17AQ96GS6 310 aa7.89□□□□□ -1.15
HMGB1P48-201ENST00000446155 NEUROD4Q9HD90 331 aa7.89□□□□□ -1.15
HMGB1P48-201ENST00000446155 STRN4Q9NRL3 753 aa7.89□□□□□ -1.15
HMGB1P48-201ENST00000446155 ATXN7L1Q9ULK2 861 aaPredicted RBP7.89□□□□□ -1.15
HMGB1P48-201ENST00000446155 GPR25O00155 361 aa7.88□□□□□ -1.15
HMGB1P48-201ENST00000446155 ARSDP51689 593 aa7.88□□□□□ -1.15
HMGB1P48-201ENST00000446155 ALKBH2Q6NS38 261 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms