RNA–Protein interactions for RNA: ENST00000445027.2

LINC01047-202, Transcript of long intergenic non-protein coding RNA 1047, humanhuman

TSL 5

Gene LINC01047, Length 686 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01047-202ENST00000445027 QTRT2Q9H974 415 aaKnown RBP8.09□□□□□ -1.11
LINC01047-202ENST00000445027 NLRP2Q9NX02 1062 aa8.09□□□□□ -1.11
LINC01047-202ENST00000445027 SMG6Q86US8 1419 aaKnown RBP8.09□□□□□ -1.11
LINC01047-202ENST00000445027 AFF2P51816 1311 aa8.08□□□□□ -1.12
LINC01047-202ENST00000445027 COL22A1Q8NFW1 1626 aaPredicted RBP8.08□□□□□ -1.12
LINC01047-202ENST00000445027 U2SURPO15042 1029 aaKnown RBP8.08□□□□□ -1.12
LINC01047-202ENST00000445027 U2AF1L5P0DN76 240 aaPredicted RBP8.08□□□□□ -1.12
LINC01047-202ENST00000445027 CSB-PGBD3P0DP91 1061 aa8.08□□□□□ -1.12
LINC01047-202ENST00000445027 U2AF1Q01081 240 aaKnown RBP eCLIP8.08□□□□□ -1.12
LINC01047-202ENST00000445027 VPS72Q15906 364 aa8.08□□□□□ -1.12
LINC01047-202ENST00000445027 SULT6B1Q6IMI4 303 aa8.08□□□□□ -1.12
LINC01047-202ENST00000445027 TOM1L2Q6ZVM7 507 aa8.08□□□□□ -1.12
LINC01047-202ENST00000445027 SULF1Q8IWU6 871 aa8.08□□□□□ -1.12
LINC01047-202ENST00000445027 FAM9BQ8IZU0 186 aa8.08□□□□□ -1.12
LINC01047-202ENST00000445027 ANKK1Q8NFD2 765 aa8.08□□□□□ -1.12
LINC01047-202ENST00000445027 LRCH3Q96II8 777 aa8.08□□□□□ -1.12
LINC01047-202ENST00000445027 PHACTR3Q96KR7 559 aa8.08□□□□□ -1.12
LINC01047-202ENST00000445027 PLEKHF1Q96S99 279 aa8.08□□□□□ -1.12
LINC01047-202ENST00000445027 CARD10Q9BWT7 1032 aa8.08□□□□□ -1.12
LINC01047-202ENST00000445027 USP35Q9P2H5 1018 aa8.08□□□□□ -1.12
LINC01047-202ENST00000445027 SLIT2O94813 1529 aa8.08□□□□□ -1.12
LINC01047-202ENST00000445027 MAP2P11137 1827 aaKnown RBP8.08□□□□□ -1.12
LINC01047-202ENST00000445027 COL18A1P39060 1754 aa8.07□□□□□ -1.12
LINC01047-202ENST00000445027 WDR17Q8IZU2 1322 aa8.07□□□□□ -1.12
LINC01047-202ENST00000445027 SENP3-EIF4A1A0A087X0R7 540 aa8.07□□□□□ -1.12
LINC01047-202ENST00000445027 SLC4A3P48751 1232 aa8.07□□□□□ -1.12
LINC01047-202ENST00000445027 POTEAQ6S8J7 498 aa8.07□□□□□ -1.12
LINC01047-202ENST00000445027 DDRGK1Q96HY6 314 aa8.07□□□□□ -1.12
LINC01047-202ENST00000445027 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.07□□□□□ -1.12
LINC01047-202ENST00000445027 NUDCQ9Y266 331 aa8.07□□□□□ -1.12
LINC01047-202ENST00000445027 RTL1A6NKG5 1358 aa8.07□□□□□ -1.12
LINC01047-202ENST00000445027 COL3A1P02461 1466 aaPredicted RBP8.06□□□□□ -1.12
LINC01047-202ENST00000445027 PEAK1Q9H792 1746 aa8.06□□□□□ -1.12
LINC01047-202ENST00000445027 SPATA31A1Q5TZJ5 1347 aa8.06□□□□□ -1.12
LINC01047-202ENST00000445027 SPATA31A5Q5VU36 1347 aa8.06□□□□□ -1.12
LINC01047-202ENST00000445027 SPATA31A7Q8IWB4 1347 aa8.06□□□□□ -1.12
LINC01047-202ENST00000445027 IGSF1Q8N6C5 1336 aa8.06□□□□□ -1.12
LINC01047-202ENST00000445027 KIF20BQ96Q89 1820 aa8.06□□□□□ -1.12
LINC01047-202ENST00000445027 USP54Q70EL1 1684 aa8.06□□□□□ -1.12
LINC01047-202ENST00000445027 BCAMP50895 628 aa8.06□□□□□ -1.12
LINC01047-202ENST00000445027 SLF2Q8IX21 1173 aa8.06□□□□□ -1.12
LINC01047-202ENST00000445027 WNT2BQ93097 391 aa8.06□□□□□ -1.12
LINC01047-202ENST00000445027 GJD4Q96KN9 370 aaPredicted RBP8.06□□□□□ -1.12
LINC01047-202ENST00000445027 RSPH6AQ9H0K4 717 aa8.06□□□□□ -1.12
LINC01047-202ENST00000445027 CRYBG1Q9Y4K1 1723 aa8.06□□□□□ -1.12
LINC01047-202ENST00000445027 COL5A2P05997 1499 aaPredicted RBP8.06□□□□□ -1.12
LINC01047-202ENST00000445027 SHPRHQ149N8 1683 aa8.05□□□□□ -1.12
LINC01047-202ENST00000445027 BLMP54132 1417 aaPredicted RBP8.05□□□□□ -1.12
LINC01047-202ENST00000445027 SLC10A3P09131 477 aa8.05□□□□□ -1.12
LINC01047-202ENST00000445027 CD46P15529 392 aa8.05□□□□□ -1.12
LINC01047-202ENST00000445027 TMEM132AQ24JP5 1023 aa8.05□□□□□ -1.12
LINC01047-202ENST00000445027 CCDC146Q8IYE0 955 aa8.05□□□□□ -1.12
LINC01047-202ENST00000445027 TCP11L2Q8N4U5 519 aa8.05□□□□□ -1.12
LINC01047-202ENST00000445027 TRPC5Q9UL62 973 aaPredicted RBP8.05□□□□□ -1.12
LINC01047-202ENST00000445027 CDK12Q9NYV4 1490 aaPredicted RBP8.05□□□□□ -1.12
LINC01047-202ENST00000445027 PHRF1Q9P1Y6 1649 aaKnown RBP8.04□□□□□ -1.12
LINC01047-202ENST00000445027 PRKAR2BP31323 418 aa8.04□□□□□ -1.12
LINC01047-202ENST00000445027 MTHFSDQ2M296 383 aaKnown RBP8.04□□□□□ -1.12
LINC01047-202ENST00000445027 ZNF772Q68DY9 489 aaPredicted RBP8.04□□□□□ -1.12
LINC01047-202ENST00000445027 CCDC9Q9Y3X0 531 aaKnown RBP8.04□□□□□ -1.12
LINC01047-202ENST00000445027 KDRP35968 1356 aa8.03□□□□□ -1.12
LINC01047-202ENST00000445027 APAF1O14727 1248 aa8.03□□□□□ -1.12
LINC01047-202ENST00000445027 IL2RBP14784 551 aa8.03□□□□□ -1.12
LINC01047-202ENST00000445027 WDR43Q15061 677 aaKnown RBP eCLIP8.03□□□□□ -1.12
LINC01047-202ENST00000445027 HPS5Q9UPZ3 1129 aa8.03□□□□□ -1.12
LINC01047-202ENST00000445027 THRAP3Q9Y2W1 955 aaKnown RBP8.03□□□□□ -1.12
LINC01047-202ENST00000445027 ANKRD26Q9UPS8 1709 aa8.03□□□□□ -1.12
LINC01047-202ENST00000445027 CRB1P82279 1406 aa8.03□□□□□ -1.12
LINC01047-202ENST00000445027 LMO7Q8WWI1 1683 aa8.02□□□□□ -1.13
LINC01047-202ENST00000445027 SOWAHBA6NEL2 793 aa8.02□□□□□ -1.13
LINC01047-202ENST00000445027 CFHP08603 1231 aa8.02□□□□□ -1.13
LINC01047-202ENST00000445027 TATP17735 454 aaPredicted RBP8.02□□□□□ -1.13
LINC01047-202ENST00000445027 NUTM1Q86Y26 1132 aa8.02□□□□□ -1.13
LINC01047-202ENST00000445027 RUNDC1Q96C34 613 aa8.02□□□□□ -1.13
LINC01047-202ENST00000445027 ATRNO75882 1429 aa8.02□□□□□ -1.13
LINC01047-202ENST00000445027 EXOC5O00471 708 aa8.01□□□□□ -1.13
LINC01047-202ENST00000445027 CYP27B1O15528 508 aa8.01□□□□□ -1.13
LINC01047-202ENST00000445027 RXRBP28702 533 aa8.01□□□□□ -1.13
LINC01047-202ENST00000445027 TMPOP42166 694 aaKnown RBP8.01□□□□□ -1.13
LINC01047-202ENST00000445027 PPP4CP60510 307 aa8.01□□□□□ -1.13
LINC01047-202ENST00000445027 RBM6P78332 1123 aaKnown RBP8.01□□□□□ -1.13
LINC01047-202ENST00000445027 PLEKHO1Q53GL0 409 aaPredicted RBP8.01□□□□□ -1.13
LINC01047-202ENST00000445027 SEPT12Q8IYM1 358 aa8.01□□□□□ -1.13
LINC01047-202ENST00000445027 IL17REQ8NFR9 667 aa8.01□□□□□ -1.13
LINC01047-202ENST00000445027 ZCRB1Q8TBF4 217 aaKnown RBP8.01□□□□□ -1.13
LINC01047-202ENST00000445027 RAPGEF4Q8WZA2 1011 aa8.01□□□□□ -1.13
LINC01047-202ENST00000445027 TBC1D2Q9BYX2 928 aa8.01□□□□□ -1.13
LINC01047-202ENST00000445027 LGR6Q9HBX8 967 aa8.01□□□□□ -1.13
LINC01047-202ENST00000445027 RRP7AQ9Y3A4 280 aaKnown RBP8.01□□□□□ -1.13
LINC01047-202ENST00000445027 RGPD5Q99666 1765 aa8.01□□□□□ -1.13
LINC01047-202ENST00000445027 NCAPD2Q15021 1401 aa8.01□□□□□ -1.13
LINC01047-202ENST00000445027 ABCA3Q99758 1704 aa8□□□□□ -1.13
LINC01047-202ENST00000445027 COL14A1Q05707 1796 aaKnown RBP8□□□□□ -1.13
LINC01047-202ENST00000445027 NRG2O14511 850 aaPredicted RBP8□□□□□ -1.13
LINC01047-202ENST00000445027 GCGRP47871 477 aa8□□□□□ -1.13
LINC01047-202ENST00000445027 RIPK4P57078 832 aa8□□□□□ -1.13
LINC01047-202ENST00000445027 MARCH10Q8NA82 808 aaPredicted RBP8□□□□□ -1.13
LINC01047-202ENST00000445027 DDX54Q8TDD1 881 aaKnown RBP8□□□□□ -1.13
LINC01047-202ENST00000445027 SPIRE2Q8WWL2 714 aa8□□□□□ -1.13
LINC01047-202ENST00000445027 PNNQ9H307 717 aaKnown RBP8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms