RNA–Protein interactions for RNA: ENST00000444942.1

LINC00642-203, long intergenic non-protein coding RNA 642, humanhuman

TSL 1 (best)

Gene LINC00642, Length 1,376 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00642-203ENST00000444942 TJP1Q07157 1748 aa12.41□□□□□ -0.42
LINC00642-203ENST00000444942 SZT2Q5T011 3432 aa12.41□□□□□ -0.42
LINC00642-203ENST00000444942 CARMIL3Q8ND23 1372 aa12.41□□□□□ -0.42
LINC00642-203ENST00000444942 FMR1Q06787 632 aaKnown RBP eCLIP12.41□□□□□ -0.42
LINC00642-203ENST00000444942 CST9Q5W186 159 aa12.41□□□□□ -0.42
LINC00642-203ENST00000444942 SPG7Q9UQ90 795 aa12.41□□□□□ -0.42
LINC00642-203ENST00000444942 PPP2R1AP30153 589 aa12.4□□□□□ -0.42
LINC00642-203ENST00000444942 CRKLP46109 303 aaKnown RBP12.4□□□□□ -0.42
LINC00642-203ENST00000444942 AEBP1Q8IUX7 1158 aa12.4□□□□□ -0.42
LINC00642-203ENST00000444942 YTHDC1Q96MU7 727 aaKnown RBP12.4□□□□□ -0.42
LINC00642-203ENST00000444942 A0A0C4DFX4 3053 aa12.4□□□□□ -0.43
LINC00642-203ENST00000444942 ZNF541Q9H0D2 1346 aa12.39□□□□□ -0.43
LINC00642-203ENST00000444942 SERPINB2P05120 415 aa12.39□□□□□ -0.43
LINC00642-203ENST00000444942 HMOX1P09601 288 aa12.39□□□□□ -0.43
LINC00642-203ENST00000444942 IL13P35225 146 aa12.39□□□□□ -0.43
LINC00642-203ENST00000444942 NFIXQ14938 502 aa12.39□□□□□ -0.43
LINC00642-203ENST00000444942 CIAPIN1Q6FI81 312 aa12.39□□□□□ -0.43
LINC00642-203ENST00000444942 SULT6B1Q6IMI4 303 aa12.39□□□□□ -0.43
LINC00642-203ENST00000444942 NCAPD2Q15021 1401 aa12.39□□□□□ -0.43
LINC00642-203ENST00000444942 RNF123Q5XPI4 1314 aa12.38□□□□□ -0.43
LINC00642-203ENST00000444942 AKAP11Q9UKA4 1901 aa12.38□□□□□ -0.43
LINC00642-203ENST00000444942 U2SURPO15042 1029 aaKnown RBP12.38□□□□□ -0.43
LINC00642-203ENST00000444942 DIAPH1O60610 1272 aaKnown RBP12.38□□□□□ -0.43
LINC00642-203ENST00000444942 ZPR1O75312 459 aa12.38□□□□□ -0.43
LINC00642-203ENST00000444942 USPL1Q5W0Q7 1092 aa12.38□□□□□ -0.43
LINC00642-203ENST00000444942 PHKG2P15735 406 aa12.37□□□□□ -0.43
LINC00642-203ENST00000444942 SAPCD2Q86UD0 394 aa12.37□□□□□ -0.43
LINC00642-203ENST00000444942 IFNL2Q8IZJ0 200 aa12.37□□□□□ -0.43
LINC00642-203ENST00000444942 ZNF622Q969S3 477 aaKnown RBP eCLIP12.37□□□□□ -0.43
LINC00642-203ENST00000444942 HHIPL1Q96JK4 782 aa12.37□□□□□ -0.43
LINC00642-203ENST00000444942 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.37□□□□□ -0.43
LINC00642-203ENST00000444942 ANP32CO43423 234 aa12.36□□□□□ -0.43
LINC00642-203ENST00000444942 CFAP53Q96M91 514 aa12.36□□□□□ -0.43
LINC00642-203ENST00000444942 PDZRN3Q9UPQ7 1066 aa12.36□□□□□ -0.43
LINC00642-203ENST00000444942 COL3A1P02461 1466 aaPredicted RBP12.36□□□□□ -0.43
LINC00642-203ENST00000444942 SCN11AQ9UI33 1791 aa12.36□□□□□ -0.43
LINC00642-203ENST00000444942 TRAF5O00463 557 aa12.35□□□□□ -0.43
LINC00642-203ENST00000444942 TRIOBPQ9H2D6 2365 aa12.35□□□□□ -0.43
LINC00642-203ENST00000444942 MKI67P46013 3256 aaKnown RBP12.34□□□□□ -0.43
LINC00642-203ENST00000444942 SOGA3Q5TF21 947 aa12.34□□□□□ -0.43
LINC00642-203ENST00000444942 INTS5Q6P9B9 1019 aaKnown RBP12.34□□□□□ -0.43
LINC00642-203ENST00000444942 SLC17A8Q8NDX2 589 aa12.34□□□□□ -0.43
LINC00642-203ENST00000444942 HPS5Q9UPZ3 1129 aa12.34□□□□□ -0.43
LINC00642-203ENST00000444942 BCORQ6W2J9 1755 aa12.34□□□□□ -0.43
LINC00642-203ENST00000444942 ERVV-2B6SEH9 535 aa12.33□□□□□ -0.44
LINC00642-203ENST00000444942 CTU1Q7Z7A3 348 aaKnown RBP12.33□□□□□ -0.44
LINC00642-203ENST00000444942 SAGE1Q9NXZ1 904 aa12.33□□□□□ -0.44
LINC00642-203ENST00000444942 NARFQ9UHQ1 456 aa12.33□□□□□ -0.44
LINC00642-203ENST00000444942 PDE6BP35913 854 aa12.32□□□□□ -0.44
LINC00642-203ENST00000444942 NOGQ13253 232 aa12.32□□□□□ -0.44
LINC00642-203ENST00000444942 ZNF530Q6P9A1 599 aaPredicted RBP12.32□□□□□ -0.44
LINC00642-203ENST00000444942 GPC2Q8N158 579 aa12.32□□□□□ -0.44
LINC00642-203ENST00000444942 ZIC5Q96T25 663 aa12.32□□□□□ -0.44
LINC00642-203ENST00000444942 BCL2L12Q9HB09 334 aa12.32□□□□□ -0.44
LINC00642-203ENST00000444942 CCER2I3L3R5 266 aa12.31□□□□□ -0.44
LINC00642-203ENST00000444942 PTCD1O75127 700 aaKnown RBP12.31□□□□□ -0.44
LINC00642-203ENST00000444942 PLEKHO1Q53GL0 409 aaPredicted RBP12.31□□□□□ -0.44
LINC00642-203ENST00000444942 BRIP1Q9BX63 1249 aa12.31□□□□□ -0.44
LINC00642-203ENST00000444942 SOS1Q07889 1333 aaPredicted RBP12.31□□□□□ -0.44
LINC00642-203ENST00000444942 CEP290O15078 2479 aa12.31□□□□□ -0.44
LINC00642-203ENST00000444942 FZD9O00144 591 aa12.3□□□□□ -0.44
LINC00642-203ENST00000444942 U2AF1L5P0DN76 240 aaPredicted RBP12.3□□□□□ -0.44
LINC00642-203ENST00000444942 U2AF1Q01081 240 aaKnown RBP eCLIP12.3□□□□□ -0.44
LINC00642-203ENST00000444942 RALBP1Q15311 655 aa12.3□□□□□ -0.44
LINC00642-203ENST00000444942 PRPF40BQ6NWY9 871 aaKnown RBP12.3□□□□□ -0.44
LINC00642-203ENST00000444942 BICDL1Q6ZP65 573 aa12.3□□□□□ -0.44
LINC00642-203ENST00000444942 CNKSR1Q969H4 720 aa12.3□□□□□ -0.44
LINC00642-203ENST00000444942 NUDCQ9Y266 331 aa12.3□□□□□ -0.44
LINC00642-203ENST00000444942 CELF2O95319 508 aaKnown RBP12.3□□□□□ -0.44
LINC00642-203ENST00000444942 AKAP4Q5JQC9 854 aa12.3□□□□□ -0.44
LINC00642-203ENST00000444942 COL6A3P12111 3177 aa12.29□□□□□ -0.44
LINC00642-203ENST00000444942 COL15A1P39059 1388 aa12.29□□□□□ -0.44
LINC00642-203ENST00000444942 MYBBP1AQ9BQG0 1328 aaKnown RBP12.29□□□□□ -0.44
LINC00642-203ENST00000444942 PITPNM2Q9BZ72 1349 aa12.29□□□□□ -0.44
LINC00642-203ENST00000444942 FKBP4Q02790 459 aaKnown RBP eCLIP12.29□□□□□ -0.44
LINC00642-203ENST00000444942 C1orf141Q5JVX7 400 aa12.29□□□□□ -0.44
LINC00642-203ENST00000444942 STYK1Q6J9G0 422 aa12.29□□□□□ -0.44
LINC00642-203ENST00000444942 C7orf43Q8WVR3 580 aa12.29□□□□□ -0.44
LINC00642-203ENST00000444942 ZNF277Q9NRM2 450 aaPredicted RBP12.29□□□□□ -0.44
LINC00642-203ENST00000444942 LMOD1P29536 600 aaPredicted RBP12.28□□□□□ -0.44
LINC00642-203ENST00000444942 PRKAR2BP31323 418 aa12.28□□□□□ -0.44
LINC00642-203ENST00000444942 PKN2Q16513 984 aaKnown RBP12.28□□□□□ -0.44
LINC00642-203ENST00000444942 AMOTQ4VCS5 1084 aa12.28□□□□□ -0.44
LINC00642-203ENST00000444942 CCDC93Q567U6 631 aa12.28□□□□□ -0.44
LINC00642-203ENST00000444942 USP50Q70EL3 339 aaPredicted RBP12.28□□□□□ -0.44
LINC00642-203ENST00000444942 PRKRIP1Q9H875 184 aaPredicted RBP12.28□□□□□ -0.44
LINC00642-203ENST00000444942 RBBP6Q7Z6E9 1792 aaKnown RBP12.27□□□□□ -0.45
LINC00642-203ENST00000444942 MTHFSDQ2M296 383 aaKnown RBP12.27□□□□□ -0.45
LINC00642-203ENST00000444942 RNF186Q9NXI6 227 aa12.27□□□□□ -0.45
LINC00642-203ENST00000444942 DLG5Q8TDM6 1919 aa12.26□□□□□ -0.45
LINC00642-203ENST00000444942 TRPA1O75762 1119 aa12.26□□□□□ -0.45
LINC00642-203ENST00000444942 SRGNP10124 158 aa12.26□□□□□ -0.45
LINC00642-203ENST00000444942 EPS15P42566 896 aa12.26□□□□□ -0.45
LINC00642-203ENST00000444942 SCNN1DP51172 638 aa12.26□□□□□ -0.45
LINC00642-203ENST00000444942 CABP4P57796 275 aa12.26□□□□□ -0.45
LINC00642-203ENST00000444942 PRR5LQ6MZQ0 368 aa12.26□□□□□ -0.45
LINC00642-203ENST00000444942 RSPH6AQ9H0K4 717 aa12.26□□□□□ -0.45
LINC00642-203ENST00000444942 COLQQ9Y215 455 aaPredicted RBP12.26□□□□□ -0.45
LINC00642-203ENST00000444942 HSP90AB1P08238 724 aaKnown RBP12.25□□□□□ -0.45
LINC00642-203ENST00000444942 CCDC24Q8N4L8 307 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms