RNA–Protein interactions for RNA: ENST00000444896.1

HMGB3P6-201, Transcript of high mobility group box 3 pseudogene 6, humanhuman

BASIC

Gene HMGB3P6, Length 598 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P6-201ENST00000444896 RHPN1Q8TCX5 695 aa8.27□□□□□ -1.09
HMGB3P6-201ENST00000444896 GZF1Q9H116 711 aaPredicted RBP8.27□□□□□ -1.09
HMGB3P6-201ENST00000444896 CRISPLD1Q9H336 500 aa8.27□□□□□ -1.09
HMGB3P6-201ENST00000444896 RUBCNLQ9H714 662 aa8.27□□□□□ -1.09
HMGB3P6-201ENST00000444896 CUEDC1Q9NWM3 386 aaPredicted RBP8.27□□□□□ -1.09
HMGB3P6-201ENST00000444896 A0A1W2PNR3 127 aa8.26□□□□□ -1.09
HMGB3P6-201ENST00000444896 ZBTB7CA1YPR0 619 aa8.26□□□□□ -1.09
HMGB3P6-201ENST00000444896 NPR3P17342 541 aa8.26□□□□□ -1.09
HMGB3P6-201ENST00000444896 FKBP4Q02790 459 aaKnown RBP eCLIP8.26□□□□□ -1.09
HMGB3P6-201ENST00000444896 ZNF280CQ8ND82 737 aa8.26□□□□□ -1.09
HMGB3P6-201ENST00000444896 SUSD3Q96L08 255 aa8.26□□□□□ -1.09
HMGB3P6-201ENST00000444896 NXF1Q9UBU9 619 aaKnown RBP8.26□□□□□ -1.09
HMGB3P6-201ENST00000444896 DBN1Q16643 649 aa8.25□□□□□ -1.09
HMGB3P6-201ENST00000444896 ZNF775Q96BV0 537 aaPredicted RBP8.25□□□□□ -1.09
HMGB3P6-201ENST00000444896 HSH2DQ96JZ2 352 aa8.25□□□□□ -1.09
HMGB3P6-201ENST00000444896 GPC6Q9Y625 555 aaPredicted RBP8.25□□□□□ -1.09
HMGB3P6-201ENST00000444896 ZBTB39O15060 712 aa8.24□□□□□ -1.09
HMGB3P6-201ENST00000444896 PPFIA3O75145 1194 aa8.24□□□□□ -1.09
HMGB3P6-201ENST00000444896 VEGFBP49765 207 aa8.24□□□□□ -1.09
HMGB3P6-201ENST00000444896 SF3B2Q13435 895 aaKnown RBP8.24□□□□□ -1.09
HMGB3P6-201ENST00000444896 UBAP2LQ14157 1087 aaKnown RBP8.24□□□□□ -1.09
HMGB3P6-201ENST00000444896 ARSJQ5FYB0 599 aaPredicted RBP8.24□□□□□ -1.09
HMGB3P6-201ENST00000444896 BICDL1Q6ZP65 573 aa8.24□□□□□ -1.09
HMGB3P6-201ENST00000444896 ETFBKMTQ8IXQ9 262 aa8.24□□□□□ -1.09
HMGB3P6-201ENST00000444896 IFT43Q96FT9 208 aa8.24□□□□□ -1.09
HMGB3P6-201ENST00000444896 STIM2Q9P246 746 aa8.24□□□□□ -1.09
HMGB3P6-201ENST00000444896 DMGDHQ9UI17 866 aaKnown RBP8.24□□□□□ -1.09
HMGB3P6-201ENST00000444896 TERTO14746 1132 aaKnown RBP8.23□□□□□ -1.09
HMGB3P6-201ENST00000444896 MPSTP25325 297 aa8.23□□□□□ -1.09
HMGB3P6-201ENST00000444896 BRD2P25440 801 aaKnown RBP8.23□□□□□ -1.09
HMGB3P6-201ENST00000444896 LRRC69Q6ZNQ3 347 aa8.23□□□□□ -1.09
HMGB3P6-201ENST00000444896 RIPOR1Q6ZS17 1223 aa8.23□□□□□ -1.09
HMGB3P6-201ENST00000444896 H3BRB1 525 aa8.22□□□□□ -1.09
HMGB3P6-201ENST00000444896 WFS1O76024 890 aa8.22□□□□□ -1.09
HMGB3P6-201ENST00000444896 ITGA6P23229 1130 aa8.22□□□□□ -1.09
HMGB3P6-201ENST00000444896 TUT1Q9H6E5 874 aaKnown RBP8.22□□□□□ -1.09
HMGB3P6-201ENST00000444896 CDC14CA4D256 554 aa8.21□□□□□ -1.1
HMGB3P6-201ENST00000444896 ARHGAP4P98171 946 aa8.21□□□□□ -1.1
HMGB3P6-201ENST00000444896 LBRQ14739 615 aaKnown RBP8.21□□□□□ -1.1
HMGB3P6-201ENST00000444896 NLRP8Q86W28 1048 aa8.21□□□□□ -1.1
HMGB3P6-201ENST00000444896 TRIM22Q8IYM9 498 aa8.21□□□□□ -1.1
HMGB3P6-201ENST00000444896 PGBD3Q8N328 593 aa8.21□□□□□ -1.1
HMGB3P6-201ENST00000444896 ZCCHC2Q9C0B9 1178 aaKnown RBP8.21□□□□□ -1.1
HMGB3P6-201ENST00000444896 ANKIB1Q9P2G1 1089 aa8.21□□□□□ -1.1
HMGB3P6-201ENST00000444896 TGFBR3LH3BV60 316 aa8.2□□□□□ -1.1
HMGB3P6-201ENST00000444896 OPLAHO14841 1288 aa8.2□□□□□ -1.1
HMGB3P6-201ENST00000444896 MICAL2O94851 1124 aa8.2□□□□□ -1.1
HMGB3P6-201ENST00000444896 IER5Q5VY09 327 aa8.2□□□□□ -1.1
HMGB3P6-201ENST00000444896 SND1Q7KZF4 910 aaKnown RBP eCLIP8.2□□□□□ -1.1
HMGB3P6-201ENST00000444896 TREML1Q86YW5 311 aa8.2□□□□□ -1.1
HMGB3P6-201ENST00000444896 GLYCTKQ8IVS8 523 aa8.2□□□□□ -1.1
HMGB3P6-201ENST00000444896 NPAS3Q8IXF0 933 aa8.2□□□□□ -1.1
HMGB3P6-201ENST00000444896 IRF7Q92985 503 aa8.2□□□□□ -1.1
HMGB3P6-201ENST00000444896 NUCKS1Q9H1E3 243 aaKnown RBP8.2□□□□□ -1.1
HMGB3P6-201ENST00000444896 HCN2Q9UL51 889 aa8.2□□□□□ -1.1
HMGB3P6-201ENST00000444896 H7C1W4 665 aa8.19□□□□□ -1.1
HMGB3P6-201ENST00000444896 FAM13AO94988 1023 aa8.19□□□□□ -1.1
HMGB3P6-201ENST00000444896 EIF1AXP47813 144 aaKnown RBP8.19□□□□□ -1.1
HMGB3P6-201ENST00000444896 HIF1AQ16665 826 aa8.19□□□□□ -1.1
HMGB3P6-201ENST00000444896 NOM1Q5C9Z4 860 aaKnown RBP8.19□□□□□ -1.1
HMGB3P6-201ENST00000444896 EFHC2Q5JST6 749 aa8.19□□□□□ -1.1
HMGB3P6-201ENST00000444896 BTLAQ7Z6A9 289 aa8.19□□□□□ -1.1
HMGB3P6-201ENST00000444896 ATCAYQ86WG3 371 aa8.19□□□□□ -1.1
HMGB3P6-201ENST00000444896 ZNF837Q96EG3 531 aaPredicted RBP8.19□□□□□ -1.1
HMGB3P6-201ENST00000444896 NEUROD4Q9HD90 331 aa8.19□□□□□ -1.1
HMGB3P6-201ENST00000444896 SAMD5Q5TGI4 173 aa8.18□□□□□ -1.1
HMGB3P6-201ENST00000444896 ABTB2Q8N961 1025 aa8.18□□□□□ -1.1
HMGB3P6-201ENST00000444896 NANOS1Q8WY41 292 aaKnown RBP8.18□□□□□ -1.1
HMGB3P6-201ENST00000444896 GMCL1Q96IK5 515 aa8.18□□□□□ -1.1
HMGB3P6-201ENST00000444896 NDFIP2Q9NV92 336 aa8.18□□□□□ -1.1
HMGB3P6-201ENST00000444896 BNIP3LO60238 219 aa8.17□□□□□ -1.1
HMGB3P6-201ENST00000444896 FZD6O60353 706 aa8.17□□□□□ -1.1
HMGB3P6-201ENST00000444896 GRNP28799 593 aaKnown RBP8.17□□□□□ -1.1
HMGB3P6-201ENST00000444896 INPP5BP32019 993 aa8.17□□□□□ -1.1
HMGB3P6-201ENST00000444896 IDH3AP50213 366 aa8.17□□□□□ -1.1
HMGB3P6-201ENST00000444896 FOXR1Q6PIV2 292 aa8.17□□□□□ -1.1
HMGB3P6-201ENST00000444896 VWA5B2Q8N398 1253 aa8.17□□□□□ -1.1
HMGB3P6-201ENST00000444896 GJA3Q9Y6H8 435 aa8.17□□□□□ -1.1
HMGB3P6-201ENST00000444896 H3BM21 787 aa8.16□□□□□ -1.1
HMGB3P6-201ENST00000444896 ATXN7O15265 892 aaPredicted RBP8.16□□□□□ -1.1
HMGB3P6-201ENST00000444896 ZAP70P43403 619 aa8.16□□□□□ -1.1
HMGB3P6-201ENST00000444896 TYRO3Q06418 890 aa8.16□□□□□ -1.1
HMGB3P6-201ENST00000444896 TREML4Q6UXN2 200 aa8.16□□□□□ -1.1
HMGB3P6-201ENST00000444896 GTPBP3Q969Y2 492 aaKnown RBP8.16□□□□□ -1.1
HMGB3P6-201ENST00000444896 BIN2Q9UBW5 565 aaPredicted RBP8.16□□□□□ -1.1
HMGB3P6-201ENST00000444896 PCDHGC4Q9Y5F7 938 aa8.16□□□□□ -1.1
HMGB3P6-201ENST00000444896 EFSO43281 561 aa8.15□□□□□ -1.1
HMGB3P6-201ENST00000444896 TNP2Q05952 138 aa8.15□□□□□ -1.1
HMGB3P6-201ENST00000444896 ALKBH2Q6NS38 261 aa8.15□□□□□ -1.1
HMGB3P6-201ENST00000444896 FIGNL1Q6PIW4 674 aa8.15□□□□□ -1.1
HMGB3P6-201ENST00000444896 SV2AQ7L0J3 742 aa8.15□□□□□ -1.1
HMGB3P6-201ENST00000444896 GPR161Q8N6U8 529 aaKnown RBP8.15□□□□□ -1.1
HMGB3P6-201ENST00000444896 CEP63Q96MT8 703 aa8.15□□□□□ -1.1
HMGB3P6-201ENST00000444896 CCDC87Q9NVE4 849 aa8.15□□□□□ -1.1
HMGB3P6-201ENST00000444896 USP20Q9Y2K6 914 aa8.15□□□□□ -1.1
HMGB3P6-201ENST00000444896 FAM157BP0CG42 384 aa8.14□□□□□ -1.11
HMGB3P6-201ENST00000444896 SFSWAPQ12872 951 aaKnown RBP8.14□□□□□ -1.11
HMGB3P6-201ENST00000444896 STRN4Q9NRL3 753 aa8.14□□□□□ -1.11
HMGB3P6-201ENST00000444896 GPR25O00155 361 aa8.13□□□□□ -1.11
HMGB3P6-201ENST00000444896 KHNYNO15037 678 aaKnown RBP8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms