RNA–Protein interactions for RNA: ENST00000443780.5

UBE2D4-205, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 3

Gene UBE2D4, Length 743 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-205ENST00000443780 NGEFQ8N5V2 710 aa26.71■■□□□ 1.87
UBE2D4-205ENST00000443780 CNBD1Q8NA66 436 aa26.71■■□□□ 1.87
UBE2D4-205ENST00000443780 ERBB4Q15303 1308 aa26.7■■□□□ 1.87
UBE2D4-205ENST00000443780 CCDC184Q52MB2 194 aa26.7■■□□□ 1.86
UBE2D4-205ENST00000443780 MYL6BP14649 208 aa26.69■■□□□ 1.86
UBE2D4-205ENST00000443780 PDE6BP35913 854 aa26.69■■□□□ 1.86
UBE2D4-205ENST00000443780 HLFQ16534 295 aa26.69■■□□□ 1.86
UBE2D4-205ENST00000443780 PDZRN3Q9UPQ7 1066 aa26.69■■□□□ 1.86
UBE2D4-205ENST00000443780 CACNA1SQ13698 1873 aa26.68■■□□□ 1.86
UBE2D4-205ENST00000443780 APAF1O14727 1248 aa26.68■■□□□ 1.86
UBE2D4-205ENST00000443780 NPHP1O15259 732 aa26.68■■□□□ 1.86
UBE2D4-205ENST00000443780 NIP7Q9Y221 180 aaKnown RBP eCLIP26.68■■□□□ 1.86
UBE2D4-205ENST00000443780 LAS1LQ9Y4W2 734 aaKnown RBP26.68■■□□□ 1.86
UBE2D4-205ENST00000443780 EIF2S2P20042 333 aaKnown RBP26.67■■□□□ 1.86
UBE2D4-205ENST00000443780 ST5P78524 1137 aa26.67■■□□□ 1.86
UBE2D4-205ENST00000443780 TTLL7Q6ZT98 887 aa26.67■■□□□ 1.86
UBE2D4-205ENST00000443780 NBPF5PQ86XG9 351 aaPredicted RBP26.67■■□□□ 1.86
UBE2D4-205ENST00000443780 TTLL6Q8N841 843 aa26.67■■□□□ 1.86
UBE2D4-205ENST00000443780 CCDC88AQ3V6T2 1871 aa26.67■■□□□ 1.86
UBE2D4-205ENST00000443780 ERVV-1B6SEH8 477 aa26.66■■□□□ 1.86
UBE2D4-205ENST00000443780 MAP3K15Q6ZN16 1313 aa26.65■■□□□ 1.86
UBE2D4-205ENST00000443780 KIF6Q6ZMV9 814 aa26.65■■□□□ 1.86
UBE2D4-205ENST00000443780 PDIA6Q15084 440 aa26.64■■□□□ 1.86
UBE2D4-205ENST00000443780 ANP32CO43423 234 aa26.63■■□□□ 1.85
UBE2D4-205ENST00000443780 KRT24Q2M2I5 525 aa26.63■■□□□ 1.85
UBE2D4-205ENST00000443780 TPTE2Q6XPS3 522 aa26.63■■□□□ 1.85
UBE2D4-205ENST00000443780 ZNF622Q969S3 477 aaKnown RBP eCLIP26.63■■□□□ 1.85
UBE2D4-205ENST00000443780 CFAP44Q96MT7 982 aa26.63■■□□□ 1.85
UBE2D4-205ENST00000443780 SLX4Q8IY92 1834 aa26.62■■□□□ 1.85
UBE2D4-205ENST00000443780 ARFGEF2Q9Y6D5 1785 aa26.62■■□□□ 1.85
UBE2D4-205ENST00000443780 LRP10Q7Z4F1 713 aa26.62■■□□□ 1.85
UBE2D4-205ENST00000443780 GPBP1L1Q9HC44 474 aaPredicted RBP26.62■■□□□ 1.85
UBE2D4-205ENST00000443780 PROSER3Q2NL68 480 aa26.61■■□□□ 1.85
UBE2D4-205ENST00000443780 ZNF526Q8TF50 670 aaPredicted RBP26.61■■□□□ 1.85
UBE2D4-205ENST00000443780 ZBTB3Q9H5J0 574 aa26.61■■□□□ 1.85
UBE2D4-205ENST00000443780 FAM177BA6PVY3 158 aa26.6■■□□□ 1.85
UBE2D4-205ENST00000443780 ANXA1P04083 346 aa26.6■■□□□ 1.85
UBE2D4-205ENST00000443780 C9orf131Q5VYM1 1079 aa26.6■■□□□ 1.85
UBE2D4-205ENST00000443780 NECTIN2Q92692 538 aa26.6■■□□□ 1.85
UBE2D4-205ENST00000443780 SRGNP10124 158 aa26.59■■□□□ 1.85
UBE2D4-205ENST00000443780 FER1L6Q2WGJ9 1857 aa26.59■■□□□ 1.85
UBE2D4-205ENST00000443780 ZNF853P0CG23 659 aa26.58■■□□□ 1.85
UBE2D4-205ENST00000443780 C1QTNF8P60827 252 aa26.58■■□□□ 1.85
UBE2D4-205ENST00000443780 STYK1Q6J9G0 422 aa26.58■■□□□ 1.85
UBE2D4-205ENST00000443780 MBIPQ9NS73 344 aa26.58■■□□□ 1.85
UBE2D4-205ENST00000443780 ANKRD36CQ5JPF3 1778 aa26.58■■□□□ 1.85
UBE2D4-205ENST00000443780 CALD1Q05682 793 aaKnown RBP26.57■■□□□ 1.84
UBE2D4-205ENST00000443780 GIGYF2Q6Y7W6 1299 aaKnown RBP26.57■■□□□ 1.84
UBE2D4-205ENST00000443780 MASTLQ96GX5 879 aa26.57■■□□□ 1.84
UBE2D4-205ENST00000443780 MRS2Q9HD23 443 aa26.57■■□□□ 1.84
UBE2D4-205ENST00000443780 KLRG2A4D1S0 409 aaPredicted RBP26.56■■□□□ 1.84
UBE2D4-205ENST00000443780 HOXB7P09629 217 aa26.56■■□□□ 1.84
UBE2D4-205ENST00000443780 CNKSR1Q969H4 720 aa26.56■■□□□ 1.84
UBE2D4-205ENST00000443780 NYXQ9GZU5 481 aa26.56■■□□□ 1.84
UBE2D4-205ENST00000443780 IFT57Q9NWB7 429 aa26.56■■□□□ 1.84
UBE2D4-205ENST00000443780 GPTP24298 496 aa26.55■■□□□ 1.84
UBE2D4-205ENST00000443780 GTF2E1P29083 439 aaPredicted RBP26.55■■□□□ 1.84
UBE2D4-205ENST00000443780 GNAI1P63096 354 aa26.55■■□□□ 1.84
UBE2D4-205ENST00000443780 RASSF7Q02833 373 aa26.55■■□□□ 1.84
UBE2D4-205ENST00000443780 ZNF34Q8IZ26 560 aa26.55■■□□□ 1.84
UBE2D4-205ENST00000443780 DDX21Q9NR30 783 aaKnown RBP eCLIP26.55■■□□□ 1.84
UBE2D4-205ENST00000443780 RNF181Q9P0P0 153 aa26.55■■□□□ 1.84
UBE2D4-205ENST00000443780 COPS6Q7L5N1 327 aa26.54■■□□□ 1.84
UBE2D4-205ENST00000443780 DICER1Q9UPY3 1922 aaKnown RBP26.54■■□□□ 1.84
UBE2D4-205ENST00000443780 UBN2Q6ZU65 1347 aa26.54■■□□□ 1.84
UBE2D4-205ENST00000443780 TNRC6CQ9HCJ0 1690 aaKnown RBP26.54■■□□□ 1.84
UBE2D4-205ENST00000443780 C21orf2O43822 256 aa26.53■■□□□ 1.84
UBE2D4-205ENST00000443780 HDGFL1Q5TGJ6 251 aa26.53■■□□□ 1.84
UBE2D4-205ENST00000443780 DUSP27Q5VZP5 1158 aa26.53■■□□□ 1.84
UBE2D4-205ENST00000443780 XAGE3Q8WTP9 111 aa26.53■■□□□ 1.84
UBE2D4-205ENST00000443780 ZNF219Q9P2Y4 722 aaPredicted RBP26.53■■□□□ 1.84
UBE2D4-205ENST00000443780 IBTKQ9P2D0 1353 aaPredicted RBP26.53■■□□□ 1.84
UBE2D4-205ENST00000443780 NPR1P16066 1061 aa26.52■■□□□ 1.84
UBE2D4-205ENST00000443780 PRPF40BQ6NWY9 871 aaKnown RBP26.52■■□□□ 1.84
UBE2D4-205ENST00000443780 NUTM1Q86Y26 1132 aa26.52■■□□□ 1.84
UBE2D4-205ENST00000443780 CHPF2Q9P2E5 772 aa26.52■■□□□ 1.84
UBE2D4-205ENST00000443780 NFKBIEO00221 500 aa26.51■■□□□ 1.83
UBE2D4-205ENST00000443780 LMNB1P20700 586 aa26.51■■□□□ 1.83
UBE2D4-205ENST00000443780 AIMP1Q12904 312 aaKnown RBP26.51■■□□□ 1.83
UBE2D4-205ENST00000443780 SUSD4Q5VX71 490 aa26.51■■□□□ 1.83
UBE2D4-205ENST00000443780 ABCC12Q96J65 1359 aa26.5■■□□□ 1.83
UBE2D4-205ENST00000443780 PRELPP51888 382 aa26.5■■□□□ 1.83
UBE2D4-205ENST00000443780 ERFEQ4G0M1 354 aa26.5■■□□□ 1.83
UBE2D4-205ENST00000443780 TIAM2Q8IVF5 1701 aa26.49■■□□□ 1.83
UBE2D4-205ENST00000443780 PARP10Q53GL7 1025 aa26.49■■□□□ 1.83
UBE2D4-205ENST00000443780 DBF4Q9UBU7 674 aaPredicted RBP26.49■■□□□ 1.83
UBE2D4-205ENST00000443780 SENP3-EIF4A1A0A087X0R7 540 aa26.48■■□□□ 1.83
UBE2D4-205ENST00000443780 CCDC27Q2M243 656 aa26.48■■□□□ 1.83
UBE2D4-205ENST00000443780 RIC1Q4ADV7 1423 aa26.48■■□□□ 1.83
UBE2D4-205ENST00000443780 KIF3CO14782 793 aa26.47■■□□□ 1.83
UBE2D4-205ENST00000443780 NTSR2O95665 410 aa26.47■■□□□ 1.83
UBE2D4-205ENST00000443780 PPP1R42Q7Z4L9 355 aa26.47■■□□□ 1.83
UBE2D4-205ENST00000443780 CRY2Q49AN0 593 aa26.46■■□□□ 1.83
UBE2D4-205ENST00000443780 HSP90AB3PQ58FF7 597 aa26.46■■□□□ 1.83
UBE2D4-205ENST00000443780 SOGA3Q5TF21 947 aa26.46■■□□□ 1.83
UBE2D4-205ENST00000443780 C7orf43Q8WVR3 580 aa26.46■■□□□ 1.83
UBE2D4-205ENST00000443780 ZC3H4Q9UPT8 1303 aaKnown RBP26.45■■□□□ 1.83
UBE2D4-205ENST00000443780 WWC1Q8IX03 1113 aa26.45■■□□□ 1.82
UBE2D4-205ENST00000443780 HYPKQ9NX55 129 aa26.45■■□□□ 1.82
UBE2D4-205ENST00000443780 ELL2O00472 640 aaPredicted RBP26.44■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms