RNA–Protein interactions for RNA: ENST00000443574.1

HLA-DQB1-206, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

Gene HLA-DQB1, Length 309 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-206ENST00000443574 ARFGEF2Q9Y6D5 1785 aa13.41□□□□□ -0.26
HLA-DQB1-206ENST00000443574 EIF2S2P20042 333 aaKnown RBP13.41□□□□□ -0.26
HLA-DQB1-206ENST00000443574 PIP4K2AP48426 406 aaPredicted RBP13.41□□□□□ -0.26
HLA-DQB1-206ENST00000443574 WWC1Q8IX03 1113 aa13.41□□□□□ -0.26
HLA-DQB1-206ENST00000443574 MBIPQ9NS73 344 aa13.41□□□□□ -0.26
HLA-DQB1-206ENST00000443574 ANKRD31Q8N7Z5 1873 aa13.4□□□□□ -0.26
HLA-DQB1-206ENST00000443574 NBPF26B4DH59 902 aa13.4□□□□□ -0.26
HLA-DQB1-206ENST00000443574 NPHP1O15259 732 aa13.4□□□□□ -0.26
HLA-DQB1-206ENST00000443574 ZNF853P0CG23 659 aa13.4□□□□□ -0.26
HLA-DQB1-206ENST00000443574 MYL6BP14649 208 aa13.4□□□□□ -0.26
HLA-DQB1-206ENST00000443574 HDGFL1Q5TGJ6 251 aa13.4□□□□□ -0.26
HLA-DQB1-206ENST00000443574 NBPF10Q6P3W6 841 aaKnown RBP13.4□□□□□ -0.26
HLA-DQB1-206ENST00000443574 CLEC4GQ6UXB4 293 aa13.4□□□□□ -0.26
HLA-DQB1-206ENST00000443574 NBPF15Q8N660 670 aa13.4□□□□□ -0.26
HLA-DQB1-206ENST00000443574 CACNA1SQ13698 1873 aa13.4□□□□□ -0.26
HLA-DQB1-206ENST00000443574 POLRMTO00411 1230 aaKnown RBP13.39□□□□□ -0.27
HLA-DQB1-206ENST00000443574 CAMTA2O94983 1202 aa13.39□□□□□ -0.27
HLA-DQB1-206ENST00000443574 DDR1Q08345 913 aa13.39□□□□□ -0.27
HLA-DQB1-206ENST00000443574 NFIXQ14938 502 aa13.39□□□□□ -0.27
HLA-DQB1-206ENST00000443574 NLGN2Q8NFZ4 835 aa13.39□□□□□ -0.27
HLA-DQB1-206ENST00000443574 SETDB2Q96T68 719 aa13.39□□□□□ -0.27
HLA-DQB1-206ENST00000443574 PXDNLA1KZ92 1463 aa13.39□□□□□ -0.27
HLA-DQB1-206ENST00000443574 TM4SF1P30408 202 aa13.38□□□□□ -0.27
HLA-DQB1-206ENST00000443574 TGFB2P61812 414 aa13.38□□□□□ -0.27
HLA-DQB1-206ENST00000443574 GPR162Q16538 588 aa13.38□□□□□ -0.27
HLA-DQB1-206ENST00000443574 BICDL1Q6ZP65 573 aa13.38□□□□□ -0.27
HLA-DQB1-206ENST00000443574 WDR63Q8IWG1 891 aa13.38□□□□□ -0.27
HLA-DQB1-206ENST00000443574 PELP1Q8IZL8 1130 aaKnown RBP13.38□□□□□ -0.27
HLA-DQB1-206ENST00000443574 BCL2L12Q9HB09 334 aa13.38□□□□□ -0.27
HLA-DQB1-206ENST00000443574 ATP10DQ9P241 1426 aa13.38□□□□□ -0.27
HLA-DQB1-206ENST00000443574 MAP3K15Q6ZN16 1313 aa13.38□□□□□ -0.27
HLA-DQB1-206ENST00000443574 COL11A2P13942 1736 aaPredicted RBP13.37□□□□□ -0.27
HLA-DQB1-206ENST00000443574 ERVV-1B6SEH8 477 aa13.37□□□□□ -0.27
HLA-DQB1-206ENST00000443574 SERPINB2P05120 415 aa13.37□□□□□ -0.27
HLA-DQB1-206ENST00000443574 DUSP27Q5VZP5 1158 aa13.37□□□□□ -0.27
HLA-DQB1-206ENST00000443574 DBF4Q9UBU7 674 aaPredicted RBP13.37□□□□□ -0.27
HLA-DQB1-206ENST00000443574 SALL2Q9Y467 1007 aaPredicted RBP13.37□□□□□ -0.27
HLA-DQB1-206ENST00000443574 SENP3-EIF4A1A0A087X0R7 540 aa13.36□□□□□ -0.27
HLA-DQB1-206ENST00000443574 ST5P78524 1137 aa13.36□□□□□ -0.27
HLA-DQB1-206ENST00000443574 KRT24Q2M2I5 525 aa13.36□□□□□ -0.27
HLA-DQB1-206ENST00000443574 TBC1D9BQ66K14 1250 aa13.36□□□□□ -0.27
HLA-DQB1-206ENST00000443574 CNBD1Q8NA66 436 aa13.36□□□□□ -0.27
HLA-DQB1-206ENST00000443574 NECTIN2Q92692 538 aa13.36□□□□□ -0.27
HLA-DQB1-206ENST00000443574 MYH16Q9H6N6 1097 aa13.36□□□□□ -0.27
HLA-DQB1-206ENST00000443574 DDX21Q9NR30 783 aaKnown RBP eCLIP13.36□□□□□ -0.27
HLA-DQB1-206ENST00000443574 HYPKQ9NX55 129 aa13.35□□□□□ -0.27
HLA-DQB1-206ENST00000443574 CHPF2Q9P2E5 772 aa13.35□□□□□ -0.27
HLA-DQB1-206ENST00000443574 PDZRN3Q9UPQ7 1066 aa13.35□□□□□ -0.27
HLA-DQB1-206ENST00000443574 NIP7Q9Y221 180 aaKnown RBP eCLIP13.35□□□□□ -0.27
HLA-DQB1-206ENST00000443574 FANCIQ9NVI1 1328 aa13.35□□□□□ -0.27
HLA-DQB1-206ENST00000443574 IBTKQ9P2D0 1353 aaPredicted RBP13.34□□□□□ -0.27
HLA-DQB1-206ENST00000443574 GOLGB1Q14789 3259 aaKnown RBP13.34□□□□□ -0.27
HLA-DQB1-206ENST00000443574 GRIN3BO60391 1043 aa13.34□□□□□ -0.27
HLA-DQB1-206ENST00000443574 GOLGA2Q08379 1002 aa13.34□□□□□ -0.27
HLA-DQB1-206ENST00000443574 HSP90AB3PQ58FF7 597 aa13.34□□□□□ -0.27
HLA-DQB1-206ENST00000443574 NBPF5PQ86XG9 351 aaPredicted RBP13.34□□□□□ -0.27
HLA-DQB1-206ENST00000443574 TSR2Q969E8 191 aaKnown RBP13.34□□□□□ -0.27
HLA-DQB1-206ENST00000443574 STK31Q9BXU1 1019 aa13.34□□□□□ -0.27
HLA-DQB1-206ENST00000443574 NYXQ9GZU5 481 aa13.34□□□□□ -0.27
HLA-DQB1-206ENST00000443574 ZBTB3Q9H5J0 574 aa13.34□□□□□ -0.27
HLA-DQB1-206ENST00000443574 LAMB2P55268 1798 aa13.34□□□□□ -0.27
HLA-DQB1-206ENST00000443574 PDE6BP35913 854 aa13.33□□□□□ -0.28
HLA-DQB1-206ENST00000443574 CCDC30Q5VVM6 783 aa13.33□□□□□ -0.28
HLA-DQB1-206ENST00000443574 TTLL7Q6ZT98 887 aa13.33□□□□□ -0.28
HLA-DQB1-206ENST00000443574 ELL2O00472 640 aaPredicted RBP13.32□□□□□ -0.28
HLA-DQB1-206ENST00000443574 ABCB7O75027 752 aa13.32□□□□□ -0.28
HLA-DQB1-206ENST00000443574 ANXA1P04083 346 aa13.32□□□□□ -0.28
HLA-DQB1-206ENST00000443574 GTF2E1P29083 439 aaPredicted RBP13.32□□□□□ -0.28
HLA-DQB1-206ENST00000443574 AIMP1Q12904 312 aaKnown RBP13.32□□□□□ -0.28
HLA-DQB1-206ENST00000443574 PDIA6Q15084 440 aa13.32□□□□□ -0.28
HLA-DQB1-206ENST00000443574 PROSER3Q2NL68 480 aa13.32□□□□□ -0.28
HLA-DQB1-206ENST00000443574 TWISTNBQ3B726 338 aaPredicted RBP13.32□□□□□ -0.28
HLA-DQB1-206ENST00000443574 PRR5LQ6MZQ0 368 aa13.32□□□□□ -0.28
HLA-DQB1-206ENST00000443574 TPTE2Q6XPS3 522 aa13.32□□□□□ -0.28
HLA-DQB1-206ENST00000443574 GIGYF2Q6Y7W6 1299 aaKnown RBP13.32□□□□□ -0.28
HLA-DQB1-206ENST00000443574 XAGE3Q8WTP9 111 aa13.32□□□□□ -0.28
HLA-DQB1-206ENST00000443574 TNRC6CQ9HCJ0 1690 aaKnown RBP13.31□□□□□ -0.28
HLA-DQB1-206ENST00000443574 H0YIN7 160 aa13.31□□□□□ -0.28
HLA-DQB1-206ENST00000443574 DDX58O95786 925 aaKnown RBP13.31□□□□□ -0.28
HLA-DQB1-206ENST00000443574 HLFQ16534 295 aa13.31□□□□□ -0.28
HLA-DQB1-206ENST00000443574 PARP10Q53GL7 1025 aa13.31□□□□□ -0.28
HLA-DQB1-206ENST00000443574 COPS6Q7L5N1 327 aa13.31□□□□□ -0.28
HLA-DQB1-206ENST00000443574 C8orf58Q8NAV2 365 aa13.31□□□□□ -0.28
HLA-DQB1-206ENST00000443574 BRIP1Q9BX63 1249 aa13.31□□□□□ -0.28
HLA-DQB1-206ENST00000443574 PIM2Q9P1W9 311 aa13.31□□□□□ -0.28
HLA-DQB1-206ENST00000443574 RNF123Q5XPI4 1314 aa13.31□□□□□ -0.28
HLA-DQB1-206ENST00000443574 RIC1Q4ADV7 1423 aa13.3□□□□□ -0.28
HLA-DQB1-206ENST00000443574 A0A0G2JLW4 131 aa13.3□□□□□ -0.28
HLA-DQB1-206ENST00000443574 DPEP1P16444 411 aa13.3□□□□□ -0.28
HLA-DQB1-206ENST00000443574 LRP10Q7Z4F1 713 aa13.3□□□□□ -0.28
HLA-DQB1-206ENST00000443574 PPP1R42Q7Z4L9 355 aa13.3□□□□□ -0.28
HLA-DQB1-206ENST00000443574 BCS1LQ9Y276 419 aa13.3□□□□□ -0.28
HLA-DQB1-206ENST00000443574 UTRNP46939 3433 aa13.3□□□□□ -0.28
HLA-DQB1-206ENST00000443574 GPTP24298 496 aa13.29□□□□□ -0.28
HLA-DQB1-206ENST00000443574 DALRD3Q5D0E6 543 aaKnown RBP13.29□□□□□ -0.28
HLA-DQB1-206ENST00000443574 C2CD5Q86YS7 1000 aa13.29□□□□□ -0.28
HLA-DQB1-206ENST00000443574 MIER1Q8N108 512 aa13.29□□□□□ -0.28
HLA-DQB1-206ENST00000443574 PLBD2Q8NHP8 589 aa13.29□□□□□ -0.28
HLA-DQB1-206ENST00000443574 ZNF521Q96K83 1311 aa13.29□□□□□ -0.28
HLA-DQB1-206ENST00000443574 MYH3P11055 1940 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms