RNA–Protein interactions for RNA: ENST00000442892.2

SLC48A1-202, Transcript of solute carrier family 48 member 1, humanhuman

TSL 1 (best) BASIC

Gene SLC48A1, Length 1,024 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC48A1-202ENST00000442892 NCBP3Q53F19 620 aaKnown RBP15.77■□□□□ 0.12
SLC48A1-202ENST00000442892 POLRMTO00411 1230 aaKnown RBP15.76■□□□□ 0.11
SLC48A1-202ENST00000442892 TCERG1O14776 1098 aaKnown RBP15.76■□□□□ 0.11
SLC48A1-202ENST00000442892 TSPYL6Q8N831 410 aa15.76■□□□□ 0.11
SLC48A1-202ENST00000442892 MYH16Q9H6N6 1097 aa15.76■□□□□ 0.11
SLC48A1-202ENST00000442892 KIF13BQ9NQT8 1826 aa15.75■□□□□ 0.11
SLC48A1-202ENST00000442892 SERPINB2P05120 415 aa15.75■□□□□ 0.11
SLC48A1-202ENST00000442892 TM4SF1P30408 202 aa15.75■□□□□ 0.11
SLC48A1-202ENST00000442892 GOLGA2Q08379 1002 aa15.75■□□□□ 0.11
SLC48A1-202ENST00000442892 PDIA6Q15084 440 aa15.75■□□□□ 0.11
SLC48A1-202ENST00000442892 HLFQ16534 295 aa15.75■□□□□ 0.11
SLC48A1-202ENST00000442892 TWISTNBQ3B726 338 aaPredicted RBP15.75■□□□□ 0.11
SLC48A1-202ENST00000442892 XAGE3Q8WTP9 111 aa15.75■□□□□ 0.11
SLC48A1-202ENST00000442892 SETDB2Q96T68 719 aa15.75■□□□□ 0.11
SLC48A1-202ENST00000442892 SPINK5Q9NQ38 1064 aaPredicted RBP15.75■□□□□ 0.11
SLC48A1-202ENST00000442892 DDX21Q9NR30 783 aaKnown RBP eCLIP15.75■□□□□ 0.11
SLC48A1-202ENST00000442892 NIP7Q9Y221 180 aaKnown RBP eCLIP15.75■□□□□ 0.11
SLC48A1-202ENST00000442892 CD2APQ9Y5K6 639 aa15.75■□□□□ 0.11
SLC48A1-202ENST00000442892 CARMIL3Q8ND23 1372 aa15.75■□□□□ 0.11
SLC48A1-202ENST00000442892 MAP3K15Q6ZN16 1313 aa15.74■□□□□ 0.11
SLC48A1-202ENST00000442892 CCDC24Q8N4L8 307 aa15.74■□□□□ 0.11
SLC48A1-202ENST00000442892 DBF4Q9UBU7 674 aaPredicted RBP15.74■□□□□ 0.11
SLC48A1-202ENST00000442892 ANKRD36CQ5JPF3 1778 aa15.73■□□□□ 0.11
SLC48A1-202ENST00000442892 GPTP24298 496 aa15.73■□□□□ 0.11
SLC48A1-202ENST00000442892 EXOSC9Q06265 439 aaKnown RBP15.73■□□□□ 0.11
SLC48A1-202ENST00000442892 GPR162Q16538 588 aa15.73■□□□□ 0.11
SLC48A1-202ENST00000442892 CCDC30Q5VVM6 783 aa15.73■□□□□ 0.11
SLC48A1-202ENST00000442892 COPS6Q7L5N1 327 aa15.73■□□□□ 0.11
SLC48A1-202ENST00000442892 C10orf71Q711Q0 1435 aa15.73■□□□□ 0.11
SLC48A1-202ENST00000442892 NRXN2Q9P2S2 1712 aa15.72■□□□□ 0.11
SLC48A1-202ENST00000442892 HNRNPUQ00839 825 aaKnown RBP eCLIP15.72■□□□□ 0.11
SLC48A1-202ENST00000442892 NBPF5PQ86XG9 351 aaPredicted RBP15.72■□□□□ 0.11
SLC48A1-202ENST00000442892 STK31Q9BXU1 1019 aa15.72■□□□□ 0.11
SLC48A1-202ENST00000442892 CLEC4GQ6UXB4 293 aa15.71■□□□□ 0.11
SLC48A1-202ENST00000442892 CNBD1Q8NA66 436 aa15.71■□□□□ 0.11
SLC48A1-202ENST00000442892 HYPKQ9NX55 129 aa15.71■□□□□ 0.11
SLC48A1-202ENST00000442892 ARFGEF2Q9Y6D5 1785 aa15.71■□□□□ 0.11
SLC48A1-202ENST00000442892 CACNA1SQ13698 1873 aa15.71■□□□□ 0.11
SLC48A1-202ENST00000442892 ZNF521Q96K83 1311 aa15.7■□□□□ 0.1
SLC48A1-202ENST00000442892 ANKRD31Q8N7Z5 1873 aa15.7■□□□□ 0.1
SLC48A1-202ENST00000442892 A0A0G2JLW4 131 aa15.7■□□□□ 0.1
SLC48A1-202ENST00000442892 ERVV-1B6SEH8 477 aa15.7■□□□□ 0.1
SLC48A1-202ENST00000442892 GTF2E1P29083 439 aaPredicted RBP15.7■□□□□ 0.1
SLC48A1-202ENST00000442892 ST5P78524 1137 aa15.7■□□□□ 0.1
SLC48A1-202ENST00000442892 ZNF428Q96B54 188 aa15.7■□□□□ 0.1
SLC48A1-202ENST00000442892 CHMP4AQ9BY43 222 aa15.7■□□□□ 0.1
SLC48A1-202ENST00000442892 KIAA1551Q9HCM1 1747 aa15.7■□□□□ 0.1
SLC48A1-202ENST00000442892 CACNA1FO60840 1977 aa15.69■□□□□ 0.1
SLC48A1-202ENST00000442892 E9PSI1 815 aa15.69■□□□□ 0.1
SLC48A1-202ENST00000442892 DPEP1P16444 411 aa15.69■□□□□ 0.1
SLC48A1-202ENST00000442892 PRR5LQ6MZQ0 368 aa15.69■□□□□ 0.1
SLC48A1-202ENST00000442892 LRP10Q7Z4F1 713 aa15.69■□□□□ 0.1
SLC48A1-202ENST00000442892 PHAXQ9H814 394 aaKnown RBP15.69■□□□□ 0.1
SLC48A1-202ENST00000442892 PXDNLA1KZ92 1463 aa15.69■□□□□ 0.1
SLC48A1-202ENST00000442892 CHRNA5P30532 468 aa15.68■□□□□ 0.1
SLC48A1-202ENST00000442892 GIGYF2Q6Y7W6 1299 aaKnown RBP15.68■□□□□ 0.1
SLC48A1-202ENST00000442892 RIC3Q7Z5B4 369 aa15.68■□□□□ 0.1
SLC48A1-202ENST00000442892 CDCA7LQ96GN5 454 aa15.68■□□□□ 0.1
SLC48A1-202ENST00000442892 TGFB2P61812 414 aa15.67■□□□□ 0.1
SLC48A1-202ENST00000442892 BRCA1P38398 1863 aaKnown RBP15.67■□□□□ 0.1
SLC48A1-202ENST00000442892 ATP10DQ9P241 1426 aa15.67■□□□□ 0.1
SLC48A1-202ENST00000442892 COL11A2P13942 1736 aaPredicted RBP15.66■□□□□ 0.1
SLC48A1-202ENST00000442892 SLC4A2P04920 1241 aa15.66■□□□□ 0.1
SLC48A1-202ENST00000442892 HSP90AB3PQ58FF7 597 aa15.66■□□□□ 0.1
SLC48A1-202ENST00000442892 TPTE2Q6XPS3 522 aa15.66■□□□□ 0.1
SLC48A1-202ENST00000442892 ANKRD13DQ6ZTN6 518 aa15.66■□□□□ 0.1
SLC48A1-202ENST00000442892 NUTM1Q86Y26 1132 aa15.66■□□□□ 0.1
SLC48A1-202ENST00000442892 C2CD5Q86YS7 1000 aa15.66■□□□□ 0.1
SLC48A1-202ENST00000442892 PLBD2Q8NHP8 589 aa15.66■□□□□ 0.1
SLC48A1-202ENST00000442892 BCS1LQ9Y276 419 aa15.66■□□□□ 0.1
SLC48A1-202ENST00000442892 UBN2Q6ZU65 1347 aa15.66■□□□□ 0.1
SLC48A1-202ENST00000442892 DLEC1Q9Y238 1755 aa15.65■□□□□ 0.1
SLC48A1-202ENST00000442892 VAMP4O75379 141 aa15.65■□□□□ 0.1
SLC48A1-202ENST00000442892 DDX58O95786 925 aaKnown RBP15.65■□□□□ 0.1
SLC48A1-202ENST00000442892 SLFN5Q08AF3 891 aa15.65■□□□□ 0.1
SLC48A1-202ENST00000442892 NYXQ9GZU5 481 aa15.65■□□□□ 0.1
SLC48A1-202ENST00000442892 ATP5J2-PTCD1G3V325 749 aa15.64■□□□□ 0.09
SLC48A1-202ENST00000442892 RGL2O15211 777 aa15.64■□□□□ 0.09
SLC48A1-202ENST00000442892 YBX3P16989 372 aaKnown RBP eCLIP15.64■□□□□ 0.092e-7■■□□□ 12.5
SLC48A1-202ENST00000442892 SUSD4Q5VX71 490 aa15.64■□□□□ 0.09
SLC48A1-202ENST00000442892 PPP1R42Q7Z4L9 355 aa15.64■□□□□ 0.09
SLC48A1-202ENST00000442892 ZNF622Q969S3 477 aaKnown RBP eCLIP15.64■□□□□ 0.09
SLC48A1-202ENST00000442892 GOLGB1Q14789 3259 aaKnown RBP15.64■□□□□ 0.09
SLC48A1-202ENST00000442892 TNRC6CQ9HCJ0 1690 aaKnown RBP15.63■□□□□ 0.09
SLC48A1-202ENST00000442892 CHD4Q14839 1912 aa15.63■□□□□ 0.09
SLC48A1-202ENST00000442892 H0YIN7 160 aa15.63■□□□□ 0.09
SLC48A1-202ENST00000442892 PDE6BP35913 854 aa15.63■□□□□ 0.09
SLC48A1-202ENST00000442892 TCIRG1Q13488 830 aa15.63■□□□□ 0.09
SLC48A1-202ENST00000442892 ERFEQ4G0M1 354 aa15.63■□□□□ 0.09
SLC48A1-202ENST00000442892 PARP10Q53GL7 1025 aa15.63■□□□□ 0.09
SLC48A1-202ENST00000442892 G2E3Q7L622 706 aa15.63■□□□□ 0.09
SLC48A1-202ENST00000442892 ZNF34Q8IZ26 560 aa15.63■□□□□ 0.09
SLC48A1-202ENST00000442892 MYD88Q99836 296 aa15.63■□□□□ 0.09
SLC48A1-202ENST00000442892 PIM2Q9P1W9 311 aa15.63■□□□□ 0.09
SLC48A1-202ENST00000442892 FKBP5Q13451 457 aaPredicted RBP15.62■□□□□ 0.09
SLC48A1-202ENST00000442892 UTP14AQ9BVJ6 771 aaKnown RBP15.62■□□□□ 0.09
SLC48A1-202ENST00000442892 BRIP1Q9BX63 1249 aa15.62■□□□□ 0.09
SLC48A1-202ENST00000442892 ZNF219Q9P2Y4 722 aaPredicted RBP15.62■□□□□ 0.09
SLC48A1-202ENST00000442892 MAP3K2Q9Y2U5 619 aa15.62■□□□□ 0.09
SLC48A1-202ENST00000442892 ABCC12Q96J65 1359 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms