RNA–Protein interactions for RNA: ENST00000442010.2

HMGB3P22-201, Transcript of high mobility group box 3 pseudogene 22, humanhuman

TSL 2 BASIC

Gene HMGB3P22, Length 597 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P22-201ENST00000442010 CACNA1SQ13698 1873 aa24.83■■□□□ 1.56
HMGB3P22-201ENST00000442010 ERBB4Q15303 1308 aa24.83■■□□□ 1.56
HMGB3P22-201ENST00000442010 ARFGEF2Q9Y6D5 1785 aa24.82■■□□□ 1.56
HMGB3P22-201ENST00000442010 CHL1O00533 1208 aa24.82■■□□□ 1.56
HMGB3P22-201ENST00000442010 CNBD1Q8NA66 436 aa24.82■■□□□ 1.56
HMGB3P22-201ENST00000442010 PDZRN3Q9UPQ7 1066 aa24.82■■□□□ 1.56
HMGB3P22-201ENST00000442010 ZNF316A6NFI3 1004 aaPredicted RBP24.81■■□□□ 1.56
HMGB3P22-201ENST00000442010 PDE6BP35913 854 aa24.81■■□□□ 1.56
HMGB3P22-201ENST00000442010 LRP10Q7Z4F1 713 aa24.81■■□□□ 1.56
HMGB3P22-201ENST00000442010 TTLL6Q8N841 843 aa24.81■■□□□ 1.56
HMGB3P22-201ENST00000442010 ERVV-1B6SEH8 477 aa24.8■■□□□ 1.56
HMGB3P22-201ENST00000442010 C1QTNF8P60827 252 aa24.8■■□□□ 1.56
HMGB3P22-201ENST00000442010 PDIA6Q15084 440 aa24.8■■□□□ 1.56
HMGB3P22-201ENST00000442010 NIP7Q9Y221 180 aaKnown RBP eCLIP24.8■■□□□ 1.56
HMGB3P22-201ENST00000442010 SLX4Q8IY92 1834 aa24.79■■□□□ 1.56
HMGB3P22-201ENST00000442010 CCDC184Q52MB2 194 aa24.79■■□□□ 1.56
HMGB3P22-201ENST00000442010 TTLL7Q6ZT98 887 aa24.79■■□□□ 1.56
HMGB3P22-201ENST00000442010 GPBP1L1Q9HC44 474 aaPredicted RBP24.79■■□□□ 1.56
HMGB3P22-201ENST00000442010 MAP3K15Q6ZN16 1313 aa24.79■■□□□ 1.56
HMGB3P22-201ENST00000442010 FER1L6Q2WGJ9 1857 aa24.79■■□□□ 1.56
HMGB3P22-201ENST00000442010 MYL6BP14649 208 aa24.78■■□□□ 1.56
HMGB3P22-201ENST00000442010 ST5P78524 1137 aa24.78■■□□□ 1.56
HMGB3P22-201ENST00000442010 NBPF5PQ86XG9 351 aaPredicted RBP24.78■■□□□ 1.56
HMGB3P22-201ENST00000442010 NGEFQ8N5V2 710 aa24.78■■□□□ 1.56
HMGB3P22-201ENST00000442010 C9orf131Q5VYM1 1079 aa24.77■■□□□ 1.56
HMGB3P22-201ENST00000442010 ZNF526Q8TF50 670 aaPredicted RBP24.76■■□□□ 1.55
HMGB3P22-201ENST00000442010 KLRG2A4D1S0 409 aaPredicted RBP24.75■■□□□ 1.55
HMGB3P22-201ENST00000442010 APAF1O14727 1248 aa24.75■■□□□ 1.55
HMGB3P22-201ENST00000442010 SRGNP10124 158 aa24.75■■□□□ 1.55
HMGB3P22-201ENST00000442010 EIF2S2P20042 333 aaKnown RBP24.75■■□□□ 1.55
HMGB3P22-201ENST00000442010 KRT24Q2M2I5 525 aa24.75■■□□□ 1.55
HMGB3P22-201ENST00000442010 TPTE2Q6XPS3 522 aa24.75■■□□□ 1.55
HMGB3P22-201ENST00000442010 PROSER3Q2NL68 480 aa24.74■■□□□ 1.55
HMGB3P22-201ENST00000442010 KIF6Q6ZMV9 814 aa24.74■■□□□ 1.55
HMGB3P22-201ENST00000442010 ZNF622Q969S3 477 aaKnown RBP eCLIP24.74■■□□□ 1.55
HMGB3P22-201ENST00000442010 DICER1Q9UPY3 1922 aaKnown RBP24.74■■□□□ 1.55
HMGB3P22-201ENST00000442010 ANKRD36CQ5JPF3 1778 aa24.73■■□□□ 1.55
HMGB3P22-201ENST00000442010 TNRC6CQ9HCJ0 1690 aaKnown RBP24.73■■□□□ 1.55
HMGB3P22-201ENST00000442010 NPHP1O15259 732 aa24.73■■□□□ 1.55
HMGB3P22-201ENST00000442010 PRELPP51888 382 aa24.73■■□□□ 1.55
HMGB3P22-201ENST00000442010 STYK1Q6J9G0 422 aa24.73■■□□□ 1.55
HMGB3P22-201ENST00000442010 CFAP44Q96MT7 982 aa24.73■■□□□ 1.55
HMGB3P22-201ENST00000442010 ZNF853P0CG23 659 aa24.72■■□□□ 1.55
HMGB3P22-201ENST00000442010 RASSF7Q02833 373 aa24.72■■□□□ 1.55
HMGB3P22-201ENST00000442010 MASTLQ96GX5 879 aa24.72■■□□□ 1.55
HMGB3P22-201ENST00000442010 ZBTB3Q9H5J0 574 aa24.72■■□□□ 1.55
HMGB3P22-201ENST00000442010 LAS1LQ9Y4W2 734 aaKnown RBP24.72■■□□□ 1.55
HMGB3P22-201ENST00000442010 ANXA1P04083 346 aa24.71■■□□□ 1.55
HMGB3P22-201ENST00000442010 GIGYF2Q6Y7W6 1299 aaKnown RBP24.71■■□□□ 1.55
HMGB3P22-201ENST00000442010 RNF181Q9P0P0 153 aa24.71■■□□□ 1.55
HMGB3P22-201ENST00000442010 UBN2Q6ZU65 1347 aa24.7■■□□□ 1.54
HMGB3P22-201ENST00000442010 FAM177BA6PVY3 158 aa24.7■■□□□ 1.54
HMGB3P22-201ENST00000442010 NFKBIEO00221 500 aa24.7■■□□□ 1.54
HMGB3P22-201ENST00000442010 KIF3CO14782 793 aa24.7■■□□□ 1.54
HMGB3P22-201ENST00000442010 ZNF34Q8IZ26 560 aa24.7■■□□□ 1.54
HMGB3P22-201ENST00000442010 CNKSR1Q969H4 720 aa24.7■■□□□ 1.54
HMGB3P22-201ENST00000442010 IBTKQ9P2D0 1353 aaPredicted RBP24.69■■□□□ 1.54
HMGB3P22-201ENST00000442010 HOXB7P09629 217 aa24.69■■□□□ 1.54
HMGB3P22-201ENST00000442010 MBIPQ9NS73 344 aa24.69■■□□□ 1.54
HMGB3P22-201ENST00000442010 TIAM2Q8IVF5 1701 aa24.69■■□□□ 1.54
HMGB3P22-201ENST00000442010 C21orf2O43822 256 aa24.68■■□□□ 1.54
HMGB3P22-201ENST00000442010 NECTIN2Q92692 538 aa24.68■■□□□ 1.54
HMGB3P22-201ENST00000442010 DDX21Q9NR30 783 aaKnown RBP eCLIP24.68■■□□□ 1.54
HMGB3P22-201ENST00000442010 ABCC12Q96J65 1359 aa24.67■■□□□ 1.54
HMGB3P22-201ENST00000442010 LMNB1P20700 586 aa24.67■■□□□ 1.54
HMGB3P22-201ENST00000442010 GPTP24298 496 aa24.67■■□□□ 1.54
HMGB3P22-201ENST00000442010 PRPF40BQ6NWY9 871 aaKnown RBP24.67■■□□□ 1.54
HMGB3P22-201ENST00000442010 NYXQ9GZU5 481 aa24.67■■□□□ 1.54
HMGB3P22-201ENST00000442010 NPR1P16066 1061 aa24.66■■□□□ 1.54
HMGB3P22-201ENST00000442010 SUSD4Q5VX71 490 aa24.66■■□□□ 1.54
HMGB3P22-201ENST00000442010 NUTM1Q86Y26 1132 aa24.66■■□□□ 1.54
HMGB3P22-201ENST00000442010 C7orf43Q8WVR3 580 aa24.66■■□□□ 1.54
HMGB3P22-201ENST00000442010 IFT57Q9NWB7 429 aa24.66■■□□□ 1.54
HMGB3P22-201ENST00000442010 RIC1Q4ADV7 1423 aa24.66■■□□□ 1.54
HMGB3P22-201ENST00000442010 ZC3H4Q9UPT8 1303 aaKnown RBP24.65■■□□□ 1.54
HMGB3P22-201ENST00000442010 COPS6Q7L5N1 327 aa24.65■■□□□ 1.54
HMGB3P22-201ENST00000442010 NTSR2O95665 410 aa24.64■■□□□ 1.54
HMGB3P22-201ENST00000442010 CRY2Q49AN0 593 aa24.64■■□□□ 1.54
HMGB3P22-201ENST00000442010 ERFEQ4G0M1 354 aa24.64■■□□□ 1.54
HMGB3P22-201ENST00000442010 XAGE3Q8WTP9 111 aa24.64■■□□□ 1.54
HMGB3P22-201ENST00000442010 CHPF2Q9P2E5 772 aa24.64■■□□□ 1.54
HMGB3P22-201ENST00000442010 ZNF219Q9P2Y4 722 aaPredicted RBP24.64■■□□□ 1.54
HMGB3P22-201ENST00000442010 LTBP3Q9NS15 1303 aa24.63■■□□□ 1.53
HMGB3P22-201ENST00000442010 ANP32CO43423 234 aa24.63■■□□□ 1.53
HMGB3P22-201ENST00000442010 GTF2E1P29083 439 aaPredicted RBP24.63■■□□□ 1.53
HMGB3P22-201ENST00000442010 GNAI1P63096 354 aa24.63■■□□□ 1.53
HMGB3P22-201ENST00000442010 DUSP27Q5VZP5 1158 aa24.63■■□□□ 1.53
HMGB3P22-201ENST00000442010 NMRK2Q9NPI5 230 aa24.63■■□□□ 1.53
HMGB3P22-201ENST00000442010 CALD1Q05682 793 aaKnown RBP24.62■■□□□ 1.53
HMGB3P22-201ENST00000442010 HDGFL1Q5TGJ6 251 aa24.62■■□□□ 1.53
HMGB3P22-201ENST00000442010 AIMP1Q12904 312 aaKnown RBP24.61■■□□□ 1.53
HMGB3P22-201ENST00000442010 PARP10Q53GL7 1025 aa24.61■■□□□ 1.53
HMGB3P22-201ENST00000442010 LAMB2P55268 1798 aa24.61■■□□□ 1.53
HMGB3P22-201ENST00000442010 CCDC27Q2M243 656 aa24.6■■□□□ 1.53
HMGB3P22-201ENST00000442010 SOGA3Q5TF21 947 aa24.6■■□□□ 1.53
HMGB3P22-201ENST00000442010 MRS2Q9HD23 443 aa24.6■■□□□ 1.53
HMGB3P22-201ENST00000442010 SENP3-EIF4A1A0A087X0R7 540 aa24.59■■□□□ 1.53
HMGB3P22-201ENST00000442010 PPP1R42Q7Z4L9 355 aa24.59■■□□□ 1.53
HMGB3P22-201ENST00000442010 DBF4Q9UBU7 674 aaPredicted RBP24.59■■□□□ 1.53
HMGB3P22-201ENST00000442010 KDM2BQ8NHM5 1336 aa24.59■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms