RNA–Protein interactions for RNA: ENST00000441135.1

SMPD4-210, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 4

Gene SMPD4, Length 699 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-210ENST00000441135 PRR5LQ6MZQ0 368 aa23.81■■□□□ 1.4
SMPD4-210ENST00000441135 TSPYL4Q9UJ04 414 aa23.81■■□□□ 1.4
SMPD4-210ENST00000441135 NPHP1O15259 732 aa23.8■■□□□ 1.4
SMPD4-210ENST00000441135 PDE6BP35913 854 aa23.8■■□□□ 1.4
SMPD4-210ENST00000441135 DLEC1Q9Y238 1755 aa23.8■■□□□ 1.4
SMPD4-210ENST00000441135 TTLL6Q8N841 843 aa23.79■■□□□ 1.4
SMPD4-210ENST00000441135 ST5P78524 1137 aa23.78■■□□□ 1.4
SMPD4-210ENST00000441135 CALD1Q05682 793 aaKnown RBP23.78■■□□□ 1.4
SMPD4-210ENST00000441135 CCDC27Q2M243 656 aa23.78■■□□□ 1.4
SMPD4-210ENST00000441135 ERBB4Q15303 1308 aa23.78■■□□□ 1.4
SMPD4-210ENST00000441135 CHL1O00533 1208 aa23.77■■□□□ 1.4
SMPD4-210ENST00000441135 ZNF526Q8TF50 670 aaPredicted RBP23.77■■□□□ 1.4
SMPD4-210ENST00000441135 NBPF5PQ86XG9 351 aaPredicted RBP23.76■■□□□ 1.39
SMPD4-210ENST00000441135 CCER2I3L3R5 266 aa23.75■■□□□ 1.39
SMPD4-210ENST00000441135 C9orf131Q5VYM1 1079 aa23.75■■□□□ 1.39
SMPD4-210ENST00000441135 ERVV-1B6SEH8 477 aa23.74■■□□□ 1.39
SMPD4-210ENST00000441135 CFAP44Q96MT7 982 aa23.74■■□□□ 1.39
SMPD4-210ENST00000441135 NIP7Q9Y221 180 aaKnown RBP eCLIP23.74■■□□□ 1.39
SMPD4-210ENST00000441135 ANKRD31Q8N7Z5 1873 aa23.74■■□□□ 1.39
SMPD4-210ENST00000441135 KIF6Q6ZMV9 814 aa23.73■■□□□ 1.39
SMPD4-210ENST00000441135 CCDC24Q8N4L8 307 aa23.73■■□□□ 1.39
SMPD4-210ENST00000441135 NGEFQ8N5V2 710 aa23.73■■□□□ 1.39
SMPD4-210ENST00000441135 ZNF853P0CG23 659 aa23.72■■□□□ 1.39
SMPD4-210ENST00000441135 ZNF622Q969S3 477 aaKnown RBP eCLIP23.72■■□□□ 1.39
SMPD4-210ENST00000441135 IFT57Q9NWB7 429 aa23.72■■□□□ 1.39
SMPD4-210ENST00000441135 MAP3K15Q6ZN16 1313 aa23.72■■□□□ 1.39
SMPD4-210ENST00000441135 TPTE2Q6XPS3 522 aa23.71■■□□□ 1.39
SMPD4-210ENST00000441135 RNF181Q9P0P0 153 aa23.71■■□□□ 1.39
SMPD4-210ENST00000441135 COL11A2P13942 1736 aaPredicted RBP23.7■■□□□ 1.39
SMPD4-210ENST00000441135 MYL6BP14649 208 aa23.7■■□□□ 1.38
SMPD4-210ENST00000441135 HLFQ16534 295 aa23.7■■□□□ 1.38
SMPD4-210ENST00000441135 STYK1Q6J9G0 422 aa23.7■■□□□ 1.38
SMPD4-210ENST00000441135 HOXB7P09629 217 aa23.69■■□□□ 1.38
SMPD4-210ENST00000441135 SRGNP10124 158 aa23.69■■□□□ 1.38
SMPD4-210ENST00000441135 GNAI1P63096 354 aa23.69■■□□□ 1.38
SMPD4-210ENST00000441135 CNKSR1Q969H4 720 aa23.69■■□□□ 1.38
SMPD4-210ENST00000441135 ZC3H4Q9UPT8 1303 aaKnown RBP23.68■■□□□ 1.38
SMPD4-210ENST00000441135 TTLL7Q6ZT98 887 aa23.68■■□□□ 1.38
SMPD4-210ENST00000441135 MASTLQ96GX5 879 aa23.68■■□□□ 1.38
SMPD4-210ENST00000441135 IL16Q14005 1332 aa23.67■■□□□ 1.38
SMPD4-210ENST00000441135 LMNB1P20700 586 aa23.67■■□□□ 1.38
SMPD4-210ENST00000441135 RASSF7Q02833 373 aa23.67■■□□□ 1.38
SMPD4-210ENST00000441135 WWC1Q8IX03 1113 aa23.67■■□□□ 1.38
SMPD4-210ENST00000441135 FAM9BQ8IZU0 186 aa23.67■■□□□ 1.38
SMPD4-210ENST00000441135 IBTKQ9P2D0 1353 aaPredicted RBP23.66■■□□□ 1.38
SMPD4-210ENST00000441135 SENP3-EIF4A1A0A087X0R7 540 aa23.66■■□□□ 1.38
SMPD4-210ENST00000441135 EIF2S2P20042 333 aaKnown RBP23.66■■□□□ 1.38
SMPD4-210ENST00000441135 DIEXFQ68CQ4 756 aaKnown RBP23.66■■□□□ 1.38
SMPD4-210ENST00000441135 NYXQ9GZU5 481 aa23.66■■□□□ 1.38
SMPD4-210ENST00000441135 KLRG2A4D1S0 409 aaPredicted RBP23.65■■□□□ 1.38
SMPD4-210ENST00000441135 KIF3CO14782 793 aa23.65■■□□□ 1.38
SMPD4-210ENST00000441135 GTF2E1P29083 439 aaPredicted RBP23.65■■□□□ 1.38
SMPD4-210ENST00000441135 PRPF40BQ6NWY9 871 aaKnown RBP23.65■■□□□ 1.38
SMPD4-210ENST00000441135 ZBTB3Q9H5J0 574 aa23.65■■□□□ 1.38
SMPD4-210ENST00000441135 MBIPQ9NS73 344 aa23.65■■□□□ 1.38
SMPD4-210ENST00000441135 LAS1LQ9Y4W2 734 aaKnown RBP23.65■■□□□ 1.38
SMPD4-210ENST00000441135 KDM2BQ8NHM5 1336 aa23.64■■□□□ 1.38
SMPD4-210ENST00000441135 FAM177BA6PVY3 158 aa23.64■■□□□ 1.37
SMPD4-210ENST00000441135 NFKBIEO00221 500 aa23.64■■□□□ 1.37
SMPD4-210ENST00000441135 NPR1P16066 1061 aa23.64■■□□□ 1.37
SMPD4-210ENST00000441135 PDIA6Q15084 440 aa23.64■■□□□ 1.37
SMPD4-210ENST00000441135 SOGA3Q5TF21 947 aa23.64■■□□□ 1.37
SMPD4-210ENST00000441135 LRP10Q7Z4F1 713 aa23.64■■□□□ 1.37
SMPD4-210ENST00000441135 C21orf2O43822 256 aa23.63■■□□□ 1.37
SMPD4-210ENST00000441135 GIGYF2Q6Y7W6 1299 aaKnown RBP23.62■■□□□ 1.37
SMPD4-210ENST00000441135 WDR63Q8IWG1 891 aa23.62■■□□□ 1.37
SMPD4-210ENST00000441135 RIC1Q4ADV7 1423 aa23.61■■□□□ 1.37
SMPD4-210ENST00000441135 PROSER3Q2NL68 480 aa23.61■■□□□ 1.37
SMPD4-210ENST00000441135 NMRK2Q9NPI5 230 aa23.61■■□□□ 1.37
SMPD4-210ENST00000441135 SBF1O95248 1867 aa23.61■■□□□ 1.37
SMPD4-210ENST00000441135 UBN2Q6ZU65 1347 aa23.6■■□□□ 1.37
SMPD4-210ENST00000441135 LTBP3Q9NS15 1303 aa23.6■■□□□ 1.37
SMPD4-210ENST00000441135 ARFGEF2Q9Y6D5 1785 aa23.6■■□□□ 1.37
SMPD4-210ENST00000441135 GPTP24298 496 aa23.6■■□□□ 1.37
SMPD4-210ENST00000441135 ZNF34Q8IZ26 560 aa23.6■■□□□ 1.37
SMPD4-210ENST00000441135 DDX21Q9NR30 783 aaKnown RBP eCLIP23.6■■□□□ 1.37
SMPD4-210ENST00000441135 ZNF219Q9P2Y4 722 aaPredicted RBP23.6■■□□□ 1.37
SMPD4-210ENST00000441135 NUP98P52948 1817 aa23.6■■□□□ 1.37
SMPD4-210ENST00000441135 ABCC12Q96J65 1359 aa23.6■■□□□ 1.37
SMPD4-210ENST00000441135 PRELPP51888 382 aa23.59■■□□□ 1.37
SMPD4-210ENST00000441135 KRT24Q2M2I5 525 aa23.59■■□□□ 1.37
SMPD4-210ENST00000441135 PARP10Q53GL7 1025 aa23.59■■□□□ 1.37
SMPD4-210ENST00000441135 NECTIN2Q92692 538 aa23.59■■□□□ 1.37
SMPD4-210ENST00000441135 TAOK3Q9H2K8 898 aa23.59■■□□□ 1.37
SMPD4-210ENST00000441135 ANXA1P04083 346 aa23.58■■□□□ 1.37
SMPD4-210ENST00000441135 HDGFL1Q5TGJ6 251 aa23.58■■□□□ 1.37
SMPD4-210ENST00000441135 CHMP4AQ9BY43 222 aa23.58■■□□□ 1.37
SMPD4-210ENST00000441135 TOMM70O94826 608 aa23.57■■□□□ 1.36
SMPD4-210ENST00000441135 CRY2Q49AN0 593 aa23.57■■□□□ 1.36
SMPD4-210ENST00000441135 ERFEQ4G0M1 354 aa23.57■■□□□ 1.36
SMPD4-210ENST00000441135 HSP90AB3PQ58FF7 597 aa23.57■■□□□ 1.36
SMPD4-210ENST00000441135 COPS6Q7L5N1 327 aa23.57■■□□□ 1.36
SMPD4-210ENST00000441135 NUTM1Q86Y26 1132 aa23.57■■□□□ 1.36
SMPD4-210ENST00000441135 SLX4Q8IY92 1834 aa23.56■■□□□ 1.36
SMPD4-210ENST00000441135 ALDH1B1P30837 517 aa23.56■■□□□ 1.36
SMPD4-210ENST00000441135 CCDC93Q567U6 631 aa23.56■■□□□ 1.36
SMPD4-210ENST00000441135 SUSD4Q5VX71 490 aa23.56■■□□□ 1.36
SMPD4-210ENST00000441135 DUSP27Q5VZP5 1158 aa23.56■■□□□ 1.36
SMPD4-210ENST00000441135 PPP1R42Q7Z4L9 355 aa23.56■■□□□ 1.36
SMPD4-210ENST00000441135 XAGE3Q8WTP9 111 aa23.56■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms