RNA–Protein interactions for RNA: ENST00000439475.1

MCF2L-216, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 453 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-216ENST00000439475 FAM9BQ8IZU0 186 aa13.58□□□□□ -0.24
MCF2L-216ENST00000439475 CNBD1Q8NA66 436 aa13.58□□□□□ -0.24
MCF2L-216ENST00000439475 BRIP1Q9BX63 1249 aa13.58□□□□□ -0.24
MCF2L-216ENST00000439475 MAP3K15Q6ZN16 1313 aa13.58□□□□□ -0.24
MCF2L-216ENST00000439475 PXDNLA1KZ92 1463 aa13.57□□□□□ -0.24
MCF2L-216ENST00000439475 ZNF853P0CG23 659 aa13.57□□□□□ -0.24
MCF2L-216ENST00000439475 HDGFL1Q5TGJ6 251 aa13.57□□□□□ -0.24
MCF2L-216ENST00000439475 NBPF5PQ86XG9 351 aaPredicted RBP13.57□□□□□ -0.24
MCF2L-216ENST00000439475 C2CD5Q86YS7 1000 aa13.57□□□□□ -0.24
MCF2L-216ENST00000439475 DDX21Q9NR30 783 aaKnown RBP eCLIP13.57□□□□□ -0.24
MCF2L-216ENST00000439475 MBIPQ9NS73 344 aa13.57□□□□□ -0.24
MCF2L-216ENST00000439475 AFDNP55196 1824 aaKnown RBP13.57□□□□□ -0.24
MCF2L-216ENST00000439475 N4BP2Q86UW6 1770 aaPredicted RBP13.56□□□□□ -0.24
MCF2L-216ENST00000439475 CHRNA5P30532 468 aa13.56□□□□□ -0.24
MCF2L-216ENST00000439475 HLFQ16534 295 aa13.56□□□□□ -0.24
MCF2L-216ENST00000439475 DUSP27Q5VZP5 1158 aa13.56□□□□□ -0.24
MCF2L-216ENST00000439475 PRR5LQ6MZQ0 368 aa13.56□□□□□ -0.24
MCF2L-216ENST00000439475 NECTIN2Q92692 538 aa13.56□□□□□ -0.24
MCF2L-216ENST00000439475 NYXQ9GZU5 481 aa13.56□□□□□ -0.24
MCF2L-216ENST00000439475 DBF4Q9UBU7 674 aaPredicted RBP13.56□□□□□ -0.24
MCF2L-216ENST00000439475 SCN7AQ01118 1682 aa13.56□□□□□ -0.24
MCF2L-216ENST00000439475 KCNA3P22001 575 aa13.55□□□□□ -0.24
MCF2L-216ENST00000439475 HSP90AB3PQ58FF7 597 aa13.55□□□□□ -0.24
MCF2L-216ENST00000439475 GIGYF2Q6Y7W6 1299 aaKnown RBP13.55□□□□□ -0.24
MCF2L-216ENST00000439475 TTLL7Q6ZT98 887 aa13.55□□□□□ -0.24
MCF2L-216ENST00000439475 ARHGAP27Q6ZUM4 889 aa13.55□□□□□ -0.24
MCF2L-216ENST00000439475 WWC1Q8IX03 1113 aa13.55□□□□□ -0.24
MCF2L-216ENST00000439475 ZBTB3Q9H5J0 574 aa13.55□□□□□ -0.24
MCF2L-216ENST00000439475 NRXN2Q9P2S2 1712 aa13.54□□□□□ -0.24
MCF2L-216ENST00000439475 BCORQ6W2J9 1755 aa13.54□□□□□ -0.24
MCF2L-216ENST00000439475 AIMP1Q12904 312 aaKnown RBP13.54□□□□□ -0.24
MCF2L-216ENST00000439475 PDIA6Q15084 440 aa13.54□□□□□ -0.24
MCF2L-216ENST00000439475 KRT24Q2M2I5 525 aa13.54□□□□□ -0.24
MCF2L-216ENST00000439475 COPS6Q7L5N1 327 aa13.54□□□□□ -0.24
MCF2L-216ENST00000439475 WDR63Q8IWG1 891 aa13.54□□□□□ -0.24
MCF2L-216ENST00000439475 TTLL6Q8N841 843 aa13.54□□□□□ -0.24
MCF2L-216ENST00000439475 ZNF622Q969S3 477 aaKnown RBP eCLIP13.54□□□□□ -0.24
MCF2L-216ENST00000439475 SALL2Q9Y467 1007 aaPredicted RBP13.54□□□□□ -0.24
MCF2L-216ENST00000439475 IL16Q14005 1332 aa13.54□□□□□ -0.24
MCF2L-216ENST00000439475 FAM177BA6PVY3 158 aa13.53□□□□□ -0.24
MCF2L-216ENST00000439475 ELL2O00472 640 aaPredicted RBP13.53□□□□□ -0.24
MCF2L-216ENST00000439475 ANXA1P04083 346 aa13.53□□□□□ -0.24
MCF2L-216ENST00000439475 PARP10Q53GL7 1025 aa13.53□□□□□ -0.24
MCF2L-216ENST00000439475 PPP1R42Q7Z4L9 355 aa13.53□□□□□ -0.24
MCF2L-216ENST00000439475 CNKSR1Q969H4 720 aa13.53□□□□□ -0.24
MCF2L-216ENST00000439475 HYPKQ9NX55 129 aa13.53□□□□□ -0.24
MCF2L-216ENST00000439475 CCDC30Q5VVM6 783 aa13.52□□□□□ -0.25
MCF2L-216ENST00000439475 CCDC24Q8N4L8 307 aa13.52□□□□□ -0.25
MCF2L-216ENST00000439475 XAGE3Q8WTP9 111 aa13.52□□□□□ -0.25
MCF2L-216ENST00000439475 MASTLQ96GX5 879 aa13.52□□□□□ -0.25
MCF2L-216ENST00000439475 CHPF2Q9P2E5 772 aa13.52□□□□□ -0.25
MCF2L-216ENST00000439475 NUP98P52948 1817 aa13.51□□□□□ -0.25
MCF2L-216ENST00000439475 SENP3-EIF4A1A0A087X0R7 540 aa13.51□□□□□ -0.25
MCF2L-216ENST00000439475 GPTP24298 496 aa13.51□□□□□ -0.25
MCF2L-216ENST00000439475 PROSER3Q2NL68 480 aa13.51□□□□□ -0.25
MCF2L-216ENST00000439475 ZNF34Q8IZ26 560 aa13.51□□□□□ -0.25
MCF2L-216ENST00000439475 KIAA1551Q9HCM1 1747 aa13.5□□□□□ -0.25
MCF2L-216ENST00000439475 CCER2I3L3R5 266 aa13.5□□□□□ -0.25
MCF2L-216ENST00000439475 STYK1Q6J9G0 422 aa13.5□□□□□ -0.25
MCF2L-216ENST00000439475 ANKRD13DQ6ZTN6 518 aa13.5□□□□□ -0.25
MCF2L-216ENST00000439475 LRP10Q7Z4F1 713 aa13.5□□□□□ -0.25
MCF2L-216ENST00000439475 ZNF784Q8NCA9 323 aaPredicted RBP13.5□□□□□ -0.25
MCF2L-216ENST00000439475 ATP10DQ9P241 1426 aa13.49□□□□□ -0.25
MCF2L-216ENST00000439475 BRCA1P38398 1863 aaKnown RBP13.49□□□□□ -0.25
MCF2L-216ENST00000439475 SRGNP10124 158 aa13.49□□□□□ -0.25
MCF2L-216ENST00000439475 NPR1P16066 1061 aa13.49□□□□□ -0.25
MCF2L-216ENST00000439475 ALDH1B1P30837 517 aa13.49□□□□□ -0.25
MCF2L-216ENST00000439475 GOLGA2Q08379 1002 aa13.49□□□□□ -0.25
MCF2L-216ENST00000439475 TCIRG1Q13488 830 aa13.49□□□□□ -0.25
MCF2L-216ENST00000439475 C8orf58Q8NAV2 365 aa13.49□□□□□ -0.25
MCF2L-216ENST00000439475 PLBD2Q8NHP8 589 aa13.49□□□□□ -0.25
MCF2L-216ENST00000439475 UTP14AQ9BVJ6 771 aaKnown RBP13.49□□□□□ -0.25
MCF2L-216ENST00000439475 STK31Q9BXU1 1019 aa13.49□□□□□ -0.25
MCF2L-216ENST00000439475 ARFGEF1Q9Y6D6 1849 aa13.48□□□□□ -0.25
MCF2L-216ENST00000439475 DDX58O95786 925 aaKnown RBP13.48□□□□□ -0.25
MCF2L-216ENST00000439475 TWISTNBQ3B726 338 aaPredicted RBP13.48□□□□□ -0.25
MCF2L-216ENST00000439475 SOGA3Q5TF21 947 aa13.48□□□□□ -0.25
MCF2L-216ENST00000439475 SUSD4Q5VX71 490 aa13.48□□□□□ -0.25
MCF2L-216ENST00000439475 RIC3Q7Z5B4 369 aa13.48□□□□□ -0.25
MCF2L-216ENST00000439475 TSR2Q969E8 191 aaKnown RBP13.48□□□□□ -0.25
MCF2L-216ENST00000439475 IBTKQ9P2D0 1353 aaPredicted RBP13.47□□□□□ -0.25
MCF2L-216ENST00000439475 RNF123Q5XPI4 1314 aa13.47□□□□□ -0.25
MCF2L-216ENST00000439475 KLRG2A4D1S0 409 aaPredicted RBP13.47□□□□□ -0.25
MCF2L-216ENST00000439475 NUTM1Q86Y26 1132 aa13.47□□□□□ -0.25
MCF2L-216ENST00000439475 NLRP3Q96P20 1036 aa13.47□□□□□ -0.25
MCF2L-216ENST00000439475 MYH16Q9H6N6 1097 aa13.47□□□□□ -0.25
MCF2L-216ENST00000439475 ERFEQ4G0M1 354 aa13.46□□□□□ -0.25
MCF2L-216ENST00000439475 RPGRQ92834 1020 aaKnown RBP13.46□□□□□ -0.25
MCF2L-216ENST00000439475 ANKRD31Q8N7Z5 1873 aa13.46□□□□□ -0.26
MCF2L-216ENST00000439475 UBN2Q6ZU65 1347 aa13.45□□□□□ -0.26
MCF2L-216ENST00000439475 C21orf2O43822 256 aa13.45□□□□□ -0.26
MCF2L-216ENST00000439475 SLC10A5Q5PT55 438 aa13.45□□□□□ -0.26
MCF2L-216ENST00000439475 NLRP10Q86W26 655 aa13.45□□□□□ -0.26
MCF2L-216ENST00000439475 TSPYL6Q8N831 410 aa13.45□□□□□ -0.26
MCF2L-216ENST00000439475 RBM17Q96I25 401 aaKnown RBP13.45□□□□□ -0.26
MCF2L-216ENST00000439475 TMX4Q9H1E5 349 aaPredicted RBP13.45□□□□□ -0.26
MCF2L-216ENST00000439475 GPBP1L1Q9HC44 474 aaPredicted RBP13.45□□□□□ -0.26
MCF2L-216ENST00000439475 ZNF219Q9P2Y4 722 aaPredicted RBP13.45□□□□□ -0.26
MCF2L-216ENST00000439475 TRMT112Q9UI30 125 aaKnown RBP13.45□□□□□ -0.26
MCF2L-216ENST00000439475 DLEC1Q9Y238 1755 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 84.7 ms