RNA–Protein interactions for RNA: ENST00000438618.2

LINC00271-203, long intergenic non-protein coding RNA 271, humanhuman

TSL 3 BASIC

Gene LINC00271, Length 1,202 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00271-203ENST00000438618 SIRT1Q96EB6 747 aa10.46□□□□□ -0.73
LINC00271-203ENST00000438618 ZFP42Q96MM3 310 aa10.46□□□□□ -0.73
LINC00271-203ENST00000438618 PTCH1Q13635 1447 aa10.46□□□□□ -0.74
LINC00271-203ENST00000438618 C1orf167Q5SNV9 1468 aa10.46□□□□□ -0.74
LINC00271-203ENST00000438618 COL16A1Q07092 1604 aaPredicted RBP10.46□□□□□ -0.74
LINC00271-203ENST00000438618 PPLO60437 1756 aa10.45□□□□□ -0.74
LINC00271-203ENST00000438618 AHDC1Q5TGY3 1603 aaPredicted RBP10.45□□□□□ -0.74
LINC00271-203ENST00000438618 ASXL1Q8IXJ9 1541 aa10.45□□□□□ -0.74
LINC00271-203ENST00000438618 LRPPRCP42704 1394 aaKnown RBP10.45□□□□□ -0.74
LINC00271-203ENST00000438618 DHX57Q6P158 1386 aaKnown RBP10.45□□□□□ -0.74
LINC00271-203ENST00000438618 ABCC11Q96J66 1382 aa10.45□□□□□ -0.74
LINC00271-203ENST00000438618 FOXO3O43524 673 aa10.45□□□□□ -0.74
LINC00271-203ENST00000438618 AP1G2O75843 785 aa10.45□□□□□ -0.74
LINC00271-203ENST00000438618 MRPL14Q6P1L8 145 aaKnown RBP10.45□□□□□ -0.74
LINC00271-203ENST00000438618 DCAF11Q8TEB1 546 aa10.45□□□□□ -0.74
LINC00271-203ENST00000438618 SLC16A10Q8TF71 515 aa10.45□□□□□ -0.74
LINC00271-203ENST00000438618 GPKOWQ92917 476 aaPredicted RBP eCLIP10.45□□□□□ -0.74
LINC00271-203ENST00000438618 PURBQ96QR8 312 aaKnown RBP10.45□□□□□ -0.74
LINC00271-203ENST00000438618 SOS2Q07890 1332 aaPredicted RBP10.44□□□□□ -0.74
LINC00271-203ENST00000438618 ADAMTS2O95450 1211 aa10.44□□□□□ -0.74
LINC00271-203ENST00000438618 FSHRP23945 695 aa10.44□□□□□ -0.74
LINC00271-203ENST00000438618 RXRBP28702 533 aa10.44□□□□□ -0.74
LINC00271-203ENST00000438618 NFX1Q12986 1120 aaKnown RBP10.44□□□□□ -0.74
LINC00271-203ENST00000438618 LRRN4Q8WUT4 740 aa10.44□□□□□ -0.74
LINC00271-203ENST00000438618 NGLY1Q96IV0 654 aa10.44□□□□□ -0.74
LINC00271-203ENST00000438618 C8orf37Q96NL8 207 aa10.44□□□□□ -0.74
LINC00271-203ENST00000438618 POGKQ9P215 609 aa10.44□□□□□ -0.74
LINC00271-203ENST00000438618 UPP2O95045 317 aa10.43□□□□□ -0.74
LINC00271-203ENST00000438618 SAFB2Q14151 953 aaKnown RBP eCLIP10.43□□□□□ -0.74
LINC00271-203ENST00000438618 QTRT2Q9H974 415 aaKnown RBP10.43□□□□□ -0.74
LINC00271-203ENST00000438618 YTHDC2Q9H6S0 1430 aaKnown RBP10.42□□□□□ -0.74
LINC00271-203ENST00000438618 SETD1AO15047 1707 aaKnown RBP10.42□□□□□ -0.74
LINC00271-203ENST00000438618 AFF2P51816 1311 aa10.42□□□□□ -0.74
LINC00271-203ENST00000438618 XPCQ01831 940 aaPredicted RBP10.42□□□□□ -0.74
LINC00271-203ENST00000438618 SH3BP5LQ7L8J4 393 aa10.42□□□□□ -0.74
LINC00271-203ENST00000438618 ITPKCQ96DU7 683 aa10.42□□□□□ -0.74
LINC00271-203ENST00000438618 PRAM1Q96QH2 718 aa10.42□□□□□ -0.74
LINC00271-203ENST00000438618 ARHGAP9Q9BRR9 750 aa10.42□□□□□ -0.74
LINC00271-203ENST00000438618 ZFAND3Q9H8U3 227 aa10.42□□□□□ -0.74
LINC00271-203ENST00000438618 LRP6O75581 1613 aa10.42□□□□□ -0.74
LINC00271-203ENST00000438618 PLEKHH1Q9ULM0 1364 aa10.41□□□□□ -0.74
LINC00271-203ENST00000438618 NPHP3Q7Z494 1330 aa10.41□□□□□ -0.74
LINC00271-203ENST00000438618 NR3C2P08235 984 aa10.41□□□□□ -0.74
LINC00271-203ENST00000438618 GRM5P41594 1212 aa10.41□□□□□ -0.74
LINC00271-203ENST00000438618 NR6A1Q15406 480 aa10.41□□□□□ -0.74
LINC00271-203ENST00000438618 C6orf118Q5T5N4 469 aa10.41□□□□□ -0.74
LINC00271-203ENST00000438618 LCE2AQ5TA79 106 aaPredicted RBP10.41□□□□□ -0.74
LINC00271-203ENST00000438618 SH3RF1Q7Z6J0 888 aa10.41□□□□□ -0.74
LINC00271-203ENST00000438618 PNMA1Q8ND90 353 aa10.41□□□□□ -0.74
LINC00271-203ENST00000438618 NXF1Q9UBU9 619 aaKnown RBP10.41□□□□□ -0.74
LINC00271-203ENST00000438618 FKBPLQ9UIM3 349 aa10.41□□□□□ -0.74
LINC00271-203ENST00000438618 TRAK1Q9UPV9 953 aa10.41□□□□□ -0.74
LINC00271-203ENST00000438618 NALCNQ8IZF0 1738 aa10.41□□□□□ -0.74
LINC00271-203ENST00000438618 PIK3C2GO75747 1445 aa10.41□□□□□ -0.74
LINC00271-203ENST00000438618 PRAG1Q86YV5 1406 aa10.41□□□□□ -0.74
LINC00271-203ENST00000438618 PNPLA6Q8IY17 1366 aa10.4□□□□□ -0.74
LINC00271-203ENST00000438618 KRT28Q7Z3Y7 464 aa10.4□□□□□ -0.74
LINC00271-203ENST00000438618 ZBTB33Q86T24 672 aa10.4□□□□□ -0.74
LINC00271-203ENST00000438618 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.4□□□□□ -0.74
LINC00271-203ENST00000438618 C1QTNF2Q9BXJ5 285 aa10.4□□□□□ -0.74
LINC00271-203ENST00000438618 SHPRHQ149N8 1683 aa10.39□□□□□ -0.75
LINC00271-203ENST00000438618 PSME1Q06323 249 aa10.39□□□□□ -0.75
LINC00271-203ENST00000438618 NEUROD2Q15784 382 aa10.39□□□□□ -0.75
LINC00271-203ENST00000438618 PPP2R2DQ66LE6 453 aa10.39□□□□□ -0.75
LINC00271-203ENST00000438618 PDXDC2PQ6P474 469 aa10.39□□□□□ -0.75
LINC00271-203ENST00000438618 KLF16Q9BXK1 252 aaPredicted RBP10.39□□□□□ -0.75
LINC00271-203ENST00000438618 MAP4K5Q9Y4K4 846 aa10.39□□□□□ -0.75
LINC00271-203ENST00000438618 TECPR2O15040 1411 aa10.39□□□□□ -0.75
LINC00271-203ENST00000438618 BMP2P12643 396 aa10.38□□□□□ -0.75
LINC00271-203ENST00000438618 RBM6P78332 1123 aaKnown RBP10.38□□□□□ -0.75
LINC00271-203ENST00000438618 TRMT44Q8IYL2 757 aaKnown RBP10.38□□□□□ -0.75
LINC00271-203ENST00000438618 SLC10A4Q96EP9 437 aa10.38□□□□□ -0.75
LINC00271-203ENST00000438618 USP21Q9UK80 565 aa10.38□□□□□ -0.75
LINC00271-203ENST00000438618 NHSL1Q5SYE7 1610 aa10.37□□□□□ -0.75
LINC00271-203ENST00000438618 INSM1Q01101 510 aaPredicted RBP10.37□□□□□ -0.75
LINC00271-203ENST00000438618 ERFEQ4G0M1 354 aa10.37□□□□□ -0.75
LINC00271-203ENST00000438618 CCDC116Q8IYX3 515 aa10.37□□□□□ -0.75
LINC00271-203ENST00000438618 PCMTD1Q96MG8 357 aaPredicted RBP10.37□□□□□ -0.75
LINC00271-203ENST00000438618 HIRIP3Q9BW71 556 aaPredicted RBP10.37□□□□□ -0.75
LINC00271-203ENST00000438618 EMILIN1Q9Y6C2 1016 aa10.37□□□□□ -0.75
LINC00271-203ENST00000438618 NRXN1Q9ULB1 1477 aa10.36□□□□□ -0.75
LINC00271-203ENST00000438618 IFT172Q9UG01 1749 aa10.36□□□□□ -0.75
LINC00271-203ENST00000438618 MAN1A2O60476 641 aa10.36□□□□□ -0.75
LINC00271-203ENST00000438618 VEGFBP49765 207 aa10.36□□□□□ -0.75
LINC00271-203ENST00000438618 PTK2Q05397 1052 aa10.36□□□□□ -0.75
LINC00271-203ENST00000438618 FNBP4Q8N3X1 1017 aaPredicted RBP10.36□□□□□ -0.75
LINC00271-203ENST00000438618 PMFBP1Q8TBY8 1022 aa10.36□□□□□ -0.75
LINC00271-203ENST00000438618 MYOM2P54296 1465 aa10.36□□□□□ -0.75
LINC00271-203ENST00000438618 ZC3H4Q9UPT8 1303 aaKnown RBP10.35□□□□□ -0.75
LINC00271-203ENST00000438618 PGPEP1Q9NXJ5 209 aa10.35□□□□□ -0.75
LINC00271-203ENST00000438618 TRPC5Q9UL62 973 aaPredicted RBP10.35□□□□□ -0.75
LINC00271-203ENST00000438618 SPATA31A3Q5VYP0 1347 aa10.34□□□□□ -0.75
LINC00271-203ENST00000438618 SOBPA7XYQ1 873 aa10.34□□□□□ -0.75
LINC00271-203ENST00000438618 WASLO00401 505 aaPredicted RBP10.34□□□□□ -0.75
LINC00271-203ENST00000438618 USP17L8P0C7I0 530 aa10.34□□□□□ -0.75
LINC00271-203ENST00000438618 LINC00528Q8N1L1 170 aa10.34□□□□□ -0.75
LINC00271-203ENST00000438618 IRF7Q92985 503 aa10.34□□□□□ -0.75
LINC00271-203ENST00000438618 CDV3Q9UKY7 258 aaKnown RBP10.34□□□□□ -0.75
LINC00271-203ENST00000438618 NPAS3Q8IXF0 933 aa10.33□□□□□ -0.76
LINC00271-203ENST00000438618 IL27Q8NEV9 243 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms