RNA–Protein interactions for RNA: ENST00000438066.1

SPEN-202, Transcript of spen family transcriptional repressor, humanhuman

TSL 3

Gene SPEN, Length 1,733 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-202ENST00000438066 ATP2B2Q01814 1243 aa9.05□□□□□ -0.96
SPEN-202ENST00000438066 PDE3BQ13370 1112 aa9.05□□□□□ -0.96
SPEN-202ENST00000438066 ZNF784Q8NCA9 323 aaPredicted RBP9.05□□□□□ -0.96
SPEN-202ENST00000438066 SLC4A9Q96Q91 983 aa9.05□□□□□ -0.96
SPEN-202ENST00000438066 NIF3L1Q9GZT8 377 aa9.05□□□□□ -0.96
SPEN-202ENST00000438066 QTRT2Q9H974 415 aaKnown RBP9.05□□□□□ -0.96
SPEN-202ENST00000438066 SCHIP1Q9P0W5 487 aaPredicted RBP9.05□□□□□ -0.96
SPEN-202ENST00000438066 CCDC18Q5T9S5 1454 aa9.04□□□□□ -0.96
SPEN-202ENST00000438066 PPEF1O14829 653 aaPredicted RBP9.04□□□□□ -0.96
SPEN-202ENST00000438066 FSHRP23945 695 aa9.04□□□□□ -0.96
SPEN-202ENST00000438066 FANCCQ00597 558 aa9.04□□□□□ -0.96
SPEN-202ENST00000438066 FAM163AQ96GL9 167 aaPredicted RBP9.04□□□□□ -0.96
SPEN-202ENST00000438066 TANGO6Q9C0B7 1094 aa9.04□□□□□ -0.96
SPEN-202ENST00000438066 RAB6BQ9NRW1 208 aa9.04□□□□□ -0.96
SPEN-202ENST00000438066 CHD1O14646 1710 aa9.04□□□□□ -0.96
SPEN-202ENST00000438066 EHBP1L1Q8N3D4 1523 aa9.03□□□□□ -0.96
SPEN-202ENST00000438066 CCNB3Q8WWL7 1395 aa9.03□□□□□ -0.96
SPEN-202ENST00000438066 A6NJY4 79 aa9.03□□□□□ -0.96
SPEN-202ENST00000438066 SKOR1P84550 965 aa9.03□□□□□ -0.96
SPEN-202ENST00000438066 FOXK2Q01167 660 aa9.03□□□□□ -0.96
SPEN-202ENST00000438066 TRIM32Q13049 653 aa9.03□□□□□ -0.96
SPEN-202ENST00000438066 FAM26DQ5JW98 314 aa9.03□□□□□ -0.96
SPEN-202ENST00000438066 RNF34Q969K3 372 aa9.03□□□□□ -0.96
SPEN-202ENST00000438066 PHLDB1Q86UU1 1377 aa9.03□□□□□ -0.96
SPEN-202ENST00000438066 PNMA6FA0A0J9YX94 578 aa9.02□□□□□ -0.97
SPEN-202ENST00000438066 PTPN5P54829 565 aa9.02□□□□□ -0.97
SPEN-202ENST00000438066 ABTB2Q8N961 1025 aa9.02□□□□□ -0.97
SPEN-202ENST00000438066 ALKBH8Q96BT7 664 aaKnown RBP9.02□□□□□ -0.97
SPEN-202ENST00000438066 NGLY1Q96IV0 654 aa9.02□□□□□ -0.97
SPEN-202ENST00000438066 TINF2Q9BSI4 451 aa9.02□□□□□ -0.97
SPEN-202ENST00000438066 POLIQ9UNA4 740 aa9.02□□□□□ -0.97
SPEN-202ENST00000438066 MAGI3Q5TCQ9 1506 aa9.02□□□□□ -0.97
SPEN-202ENST00000438066 SUPT6HQ7KZ85 1726 aaKnown RBP9.01□□□□□ -0.97
SPEN-202ENST00000438066 ITGAEP38570 1179 aa9.01□□□□□ -0.97
SPEN-202ENST00000438066 SMTNP53814 917 aa9.01□□□□□ -0.97
SPEN-202ENST00000438066 PSMA6P60900 246 aaKnown RBP9.01□□□□□ -0.97
SPEN-202ENST00000438066 CYP2U1Q7Z449 544 aa9.01□□□□□ -0.97
SPEN-202ENST00000438066 STAG2Q8N3U4 1231 aa9.01□□□□□ -0.97
SPEN-202ENST00000438066 CCSER2Q9H7U1 834 aa9.01□□□□□ -0.97
SPEN-202ENST00000438066 CAPN10Q9HC96 672 aa9.01□□□□□ -0.97
SPEN-202ENST00000438066 ARHGEF11O15085 1522 aa9.01□□□□□ -0.97
SPEN-202ENST00000438066 EPRSP07814 1512 aaKnown RBP9.01□□□□□ -0.97
SPEN-202ENST00000438066 RAPGEF6Q8TEU7 1601 aa9.01□□□□□ -0.97
SPEN-202ENST00000438066 GNRH1P01148 92 aa9□□□□□ -0.97
SPEN-202ENST00000438066 ZNF76P36508 570 aa9□□□□□ -0.97
SPEN-202ENST00000438066 DNM1Q05193 864 aaKnown RBP9□□□□□ -0.97
SPEN-202ENST00000438066 DHX9Q08211 1270 aaKnown RBP9□□□□□ -0.97
SPEN-202ENST00000438066 ESCO1Q5FWF5 840 aa9□□□□□ -0.97
SPEN-202ENST00000438066 DPH6Q7L8W6 267 aa9□□□□□ -0.97
SPEN-202ENST00000438066 EHBP1Q8NDI1 1231 aa9□□□□□ -0.97
SPEN-202ENST00000438066 DNAJC2Q99543 621 aaKnown RBP9□□□□□ -0.97
SPEN-202ENST00000438066 METTL5Q9NRN9 209 aaKnown RBP9□□□□□ -0.97
SPEN-202ENST00000438066 USP3Q9Y6I4 520 aa9□□□□□ -0.97
SPEN-202ENST00000438066 LILRA1O75019 489 aa9□□□□□ -0.97
SPEN-202ENST00000438066 BRD2P25440 801 aaKnown RBP9□□□□□ -0.97
SPEN-202ENST00000438066 CANXP27824 592 aaKnown RBP9□□□□□ -0.97
SPEN-202ENST00000438066 GRM5P41594 1212 aa9□□□□□ -0.97
SPEN-202ENST00000438066 ENOX2Q16206 610 aaKnown RBP9□□□□□ -0.97
SPEN-202ENST00000438066 TGIF2Q9GZN2 237 aa9□□□□□ -0.97
SPEN-202ENST00000438066 ACBD3Q9H3P7 528 aa9□□□□□ -0.97
SPEN-202ENST00000438066 ARHGEF10LQ9HCE6 1279 aa9□□□□□ -0.97
SPEN-202ENST00000438066 CHMP3Q9Y3E7 222 aa9□□□□□ -0.97
SPEN-202ENST00000438066 PPM1GO15355 546 aaPredicted RBP8.99□□□□□ -0.97
SPEN-202ENST00000438066 MTFR1Q15390 333 aa8.99□□□□□ -0.97
SPEN-202ENST00000438066 PRKAG2Q9UGJ0 569 aa8.99□□□□□ -0.97
SPEN-202ENST00000438066 CDK13Q14004 1512 aaKnown RBP8.99□□□□□ -0.97
SPEN-202ENST00000438066 SHROOM2Q13796 1616 aa8.98□□□□□ -0.97
SPEN-202ENST00000438066 NUP153P49790 1475 aaKnown RBP8.98□□□□□ -0.97
SPEN-202ENST00000438066 POTEMA6NI47 508 aa8.98□□□□□ -0.97
SPEN-202ENST00000438066 WNT7BP56706 349 aa8.98□□□□□ -0.97
SPEN-202ENST00000438066 MYT1Q01538 1121 aa8.98□□□□□ -0.97
SPEN-202ENST00000438066 ALG1LQ6GMV1 187 aa8.98□□□□□ -0.97
SPEN-202ENST00000438066 GJD3Q8N144 294 aa8.98□□□□□ -0.97
SPEN-202ENST00000438066 TRIM52Q96A61 297 aa8.98□□□□□ -0.97
SPEN-202ENST00000438066 MYO19Q96H55 970 aa8.98□□□□□ -0.97
SPEN-202ENST00000438066 EMILIN1Q9Y6C2 1016 aa8.98□□□□□ -0.97
SPEN-202ENST00000438066 TLL2Q9Y6L7 1015 aa8.98□□□□□ -0.97
SPEN-202ENST00000438066 MTUS2Q5JR59 1369 aa8.98□□□□□ -0.97
SPEN-202ENST00000438066 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.98□□□□□ -0.97
SPEN-202ENST00000438066 NCOA2Q15596 1464 aa8.98□□□□□ -0.97
SPEN-202ENST00000438066 TNNI2P48788 182 aa8.97□□□□□ -0.97
SPEN-202ENST00000438066 PLA2G2CQ5R387 149 aa8.97□□□□□ -0.97
SPEN-202ENST00000438066 SH3PXD2AQ5TCZ1 1133 aa8.97□□□□□ -0.97
SPEN-202ENST00000438066 GIMAP6Q6P9H5 292 aa8.97□□□□□ -0.97
SPEN-202ENST00000438066 ETFBKMTQ8IXQ9 262 aa8.97□□□□□ -0.97
SPEN-202ENST00000438066 EDEM1Q92611 657 aa8.97□□□□□ -0.97
SPEN-202ENST00000438066 CDK15Q96Q40 435 aa8.97□□□□□ -0.97
SPEN-202ENST00000438066 FGD6Q6ZV73 1430 aa8.97□□□□□ -0.97
SPEN-202ENST00000438066 ADD1P35611 737 aaKnown RBP8.97□□□□□ -0.97
SPEN-202ENST00000438066 TLR1Q15399 786 aa8.97□□□□□ -0.97
SPEN-202ENST00000438066 PPP1R26Q5T8A7 1209 aaPredicted RBP8.97□□□□□ -0.97
SPEN-202ENST00000438066 DHX38Q92620 1227 aaKnown RBP8.97□□□□□ -0.97
SPEN-202ENST00000438066 MZF1P28698 734 aaPredicted RBP8.96□□□□□ -0.98
SPEN-202ENST00000438066 GNA15P30679 374 aa8.96□□□□□ -0.98
SPEN-202ENST00000438066 CCDC116Q8IYX3 515 aa8.96□□□□□ -0.98
SPEN-202ENST00000438066 ZNF232Q9UNY5 417 aa8.96□□□□□ -0.98
SPEN-202ENST00000438066 CARMIL2Q6F5E8 1435 aa8.95□□□□□ -0.98
SPEN-202ENST00000438066 IL2RAP01589 272 aa8.95□□□□□ -0.98
SPEN-202ENST00000438066 GTF2F1P35269 517 aaKnown RBP eCLIP8.95□□□□□ -0.98
SPEN-202ENST00000438066 USP5P45974 858 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms