RNA–Protein interactions for RNA: ENST00000435908.1

GAPDHP59-201, Transcript of glyceraldehyde-3-phosphate dehydrogenase pseudogene 59, humanhuman

BASIC

Gene GAPDHP59, Length 267 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDHP59-201ENST00000435908 SRGNP10124 158 aa8.52□□□□□ -1.05
GAPDHP59-201ENST00000435908 PRPF40BQ6NWY9 871 aaKnown RBP8.52□□□□□ -1.05
GAPDHP59-201ENST00000435908 CNBD1Q8NA66 436 aa8.52□□□□□ -1.05
GAPDHP59-201ENST00000435908 SMC1BQ8NDV3 1235 aa8.52□□□□□ -1.05
GAPDHP59-201ENST00000435908 C7orf43Q8WVR3 580 aa8.52□□□□□ -1.05
GAPDHP59-201ENST00000435908 TEX13AQ9BXU3 409 aaPredicted RBP8.52□□□□□ -1.05
GAPDHP59-201ENST00000435908 ARFGEF2Q9Y6D5 1785 aa8.52□□□□□ -1.05
GAPDHP59-201ENST00000435908 DICER1Q9UPY3 1922 aaKnown RBP8.52□□□□□ -1.05
GAPDHP59-201ENST00000435908 U2AF1L5P0DN76 240 aaPredicted RBP8.51□□□□□ -1.05
GAPDHP59-201ENST00000435908 VEGFAP15692 232 aaPredicted RBP8.51□□□□□ -1.05
GAPDHP59-201ENST00000435908 PDE6BP35913 854 aa8.51□□□□□ -1.05
GAPDHP59-201ENST00000435908 U2AF1Q01081 240 aaKnown RBP eCLIP8.51□□□□□ -1.05
GAPDHP59-201ENST00000435908 SETDB2Q96T68 719 aa8.51□□□□□ -1.05
GAPDHP59-201ENST00000435908 MIS18AQ9NYP9 233 aa8.51□□□□□ -1.05
GAPDHP59-201ENST00000435908 LTBP3Q9NS15 1303 aa8.51□□□□□ -1.05
GAPDHP59-201ENST00000435908 ABCC12Q96J65 1359 aa8.5□□□□□ -1.05
GAPDHP59-201ENST00000435908 DDNO94850 711 aaPredicted RBP8.5□□□□□ -1.05
GAPDHP59-201ENST00000435908 HLFQ16534 295 aa8.5□□□□□ -1.05
GAPDHP59-201ENST00000435908 ERFEQ4G0M1 354 aa8.5□□□□□ -1.05
GAPDHP59-201ENST00000435908 STYK1Q6J9G0 422 aa8.5□□□□□ -1.05
GAPDHP59-201ENST00000435908 SNED1Q8TER0 1413 aa8.5□□□□□ -1.05
GAPDHP59-201ENST00000435908 THUMPD2Q9BTF0 503 aaKnown RBP8.5□□□□□ -1.05
GAPDHP59-201ENST00000435908 TAOK3Q9H2K8 898 aa8.5□□□□□ -1.05
GAPDHP59-201ENST00000435908 COL4A5P29400 1685 aa8.49□□□□□ -1.05
GAPDHP59-201ENST00000435908 LAMB4A4D0S4 1761 aa8.49□□□□□ -1.05
GAPDHP59-201ENST00000435908 KLRG2A4D1S0 409 aaPredicted RBP8.49□□□□□ -1.05
GAPDHP59-201ENST00000435908 SNRPA1P09661 255 aaKnown RBP8.49□□□□□ -1.05
GAPDHP59-201ENST00000435908 NBPF5PQ86XG9 351 aaPredicted RBP8.49□□□□□ -1.05
GAPDHP59-201ENST00000435908 CFAP53Q96M91 514 aa8.49□□□□□ -1.05
GAPDHP59-201ENST00000435908 ZNF541Q9H0D2 1346 aa8.49□□□□□ -1.05
GAPDHP59-201ENST00000435908 DLG5Q8TDM6 1919 aa8.48□□□□□ -1.05
GAPDHP59-201ENST00000435908 KDM3BQ7LBC6 1761 aa8.48□□□□□ -1.05
GAPDHP59-201ENST00000435908 FAM177BA6PVY3 158 aa8.48□□□□□ -1.05
GAPDHP59-201ENST00000435908 ST5P78524 1137 aa8.48□□□□□ -1.05
GAPDHP59-201ENST00000435908 CLEC4GQ6UXB4 293 aa8.48□□□□□ -1.05
GAPDHP59-201ENST00000435908 CNKSR1Q969H4 720 aa8.48□□□□□ -1.05
GAPDHP59-201ENST00000435908 MASTLQ96GX5 879 aa8.48□□□□□ -1.05
GAPDHP59-201ENST00000435908 NIP7Q9Y221 180 aaKnown RBP eCLIP8.48□□□□□ -1.05
GAPDHP59-201ENST00000435908 NPHP1O15259 732 aa8.47□□□□□ -1.05
GAPDHP59-201ENST00000435908 HSPA1AP0DMV8 641 aaKnown RBP8.47□□□□□ -1.05
GAPDHP59-201ENST00000435908 HSPA1BP0DMV9 641 aaKnown RBP8.47□□□□□ -1.05
GAPDHP59-201ENST00000435908 TTLL7Q6ZT98 887 aa8.47□□□□□ -1.05
GAPDHP59-201ENST00000435908 RTF1Q92541 710 aaKnown RBP8.47□□□□□ -1.05
GAPDHP59-201ENST00000435908 PLEKHF1Q96S99 279 aa8.47□□□□□ -1.05
GAPDHP59-201ENST00000435908 ZNF277Q9NRM2 450 aaPredicted RBP8.47□□□□□ -1.05
GAPDHP59-201ENST00000435908 PDZRN3Q9UPQ7 1066 aa8.47□□□□□ -1.05
GAPDHP59-201ENST00000435908 NUDCQ9Y266 331 aa8.47□□□□□ -1.05
GAPDHP59-201ENST00000435908 UBN2Q6ZU65 1347 aa8.47□□□□□ -1.05
GAPDHP59-201ENST00000435908 ADAMTSL1Q8N6G6 1762 aa8.46□□□□□ -1.05
GAPDHP59-201ENST00000435908 HTATSF1O43719 755 aaKnown RBP8.46□□□□□ -1.06
GAPDHP59-201ENST00000435908 NPR1P16066 1061 aa8.46□□□□□ -1.06
GAPDHP59-201ENST00000435908 TAF7Q15545 349 aaPredicted RBP8.46□□□□□ -1.06
GAPDHP59-201ENST00000435908 CHADLQ6NUI6 762 aa8.46□□□□□ -1.06
GAPDHP59-201ENST00000435908 DPY19L2Q6NUT2 758 aa8.46□□□□□ -1.06
GAPDHP59-201ENST00000435908 C3orf67Q6ZVT6 689 aa8.46□□□□□ -1.06
GAPDHP59-201ENST00000435908 NUTM1Q86Y26 1132 aa8.46□□□□□ -1.06
GAPDHP59-201ENST00000435908 NGEFQ8N5V2 710 aa8.46□□□□□ -1.06
GAPDHP59-201ENST00000435908 L3MBTL3Q96JM7 780 aaPredicted RBP8.46□□□□□ -1.06
GAPDHP59-201ENST00000435908 NUP98P52948 1817 aa8.45□□□□□ -1.06
GAPDHP59-201ENST00000435908 EIF4A1P60842 406 aaKnown RBP8.45□□□□□ -1.06
GAPDHP59-201ENST00000435908 FKBP4Q02790 459 aaKnown RBP eCLIP8.45□□□□□ -1.06
GAPDHP59-201ENST00000435908 CRY2Q49AN0 593 aa8.45□□□□□ -1.06
GAPDHP59-201ENST00000435908 CCDC93Q567U6 631 aa8.45□□□□□ -1.06
GAPDHP59-201ENST00000435908 LRP10Q7Z4F1 713 aa8.45□□□□□ -1.06
GAPDHP59-201ENST00000435908 NPM2Q86SE8 214 aaKnown RBP8.45□□□□□ -1.06
GAPDHP59-201ENST00000435908 TAF1DQ9H5J8 278 aaPredicted RBP8.45□□□□□ -1.06
GAPDHP59-201ENST00000435908 MKRN1Q9UHC7 482 aaKnown RBP8.45□□□□□ -1.06
GAPDHP59-201ENST00000435908 ZNF652Q9Y2D9 606 aa8.45□□□□□ -1.06
GAPDHP59-201ENST00000435908 PASKQ96RG2 1323 aa8.45□□□□□ -1.06
GAPDHP59-201ENST00000435908 LTBP1Q14766 1721 aa8.45□□□□□ -1.06
GAPDHP59-201ENST00000435908 RGL2O15211 777 aa8.44□□□□□ -1.06
GAPDHP59-201ENST00000435908 CAPN15O75808 1086 aa8.44□□□□□ -1.06
GAPDHP59-201ENST00000435908 MYL6BP14649 208 aa8.44□□□□□ -1.06
GAPDHP59-201ENST00000435908 GPTP24298 496 aa8.44□□□□□ -1.06
GAPDHP59-201ENST00000435908 NFE2L2Q16236 605 aa8.44□□□□□ -1.06
GAPDHP59-201ENST00000435908 PROSER3Q2NL68 480 aa8.44□□□□□ -1.06
GAPDHP59-201ENST00000435908 TPTE2Q6XPS3 522 aa8.44□□□□□ -1.06
GAPDHP59-201ENST00000435908 ZBTB3Q9H5J0 574 aa8.44□□□□□ -1.06
GAPDHP59-201ENST00000435908 CREBZFQ9NS37 354 aa8.44□□□□□ -1.06
GAPDHP59-201ENST00000435908 MAP3K15Q6ZN16 1313 aa8.44□□□□□ -1.06
GAPDHP59-201ENST00000435908 SCN4AP35499 1836 aa8.43□□□□□ -1.06
GAPDHP59-201ENST00000435908 FZD9O00144 591 aa8.43□□□□□ -1.06
GAPDHP59-201ENST00000435908 ITGBL1O95965 494 aaPredicted RBP8.43□□□□□ -1.06
GAPDHP59-201ENST00000435908 PDIA6Q15084 440 aa8.43□□□□□ -1.06
GAPDHP59-201ENST00000435908 SOGA3Q5TF21 947 aa8.43□□□□□ -1.06
GAPDHP59-201ENST00000435908 SUSD4Q5VX71 490 aa8.43□□□□□ -1.06
GAPDHP59-201ENST00000435908 SYNE4Q8N205 404 aa8.43□□□□□ -1.06
GAPDHP59-201ENST00000435908 RRP7AQ9Y3A4 280 aaKnown RBP8.43□□□□□ -1.06
GAPDHP59-201ENST00000435908 RNF123Q5XPI4 1314 aa8.43□□□□□ -1.06
GAPDHP59-201ENST00000435908 CNTNAP1P78357 1384 aa8.43□□□□□ -1.06
GAPDHP59-201ENST00000435908 RIC1Q4ADV7 1423 aa8.43□□□□□ -1.06
GAPDHP59-201ENST00000435908 ERVV-1B6SEH8 477 aa8.42□□□□□ -1.06
GAPDHP59-201ENST00000435908 NTSR2O95665 410 aa8.42□□□□□ -1.06
GAPDHP59-201ENST00000435908 ANXA1P04083 346 aa8.42□□□□□ -1.06
GAPDHP59-201ENST00000435908 IARSP41252 1262 aaKnown RBP8.42□□□□□ -1.06
GAPDHP59-201ENST00000435908 FMR1Q06787 632 aaKnown RBP eCLIP8.42□□□□□ -1.06
GAPDHP59-201ENST00000435908 EAPPQ56P03 285 aaPredicted RBP8.42□□□□□ -1.06
GAPDHP59-201ENST00000435908 LDHDQ86WU2 507 aa8.42□□□□□ -1.06
GAPDHP59-201ENST00000435908 ZNF34Q8IZ26 560 aa8.42□□□□□ -1.06
GAPDHP59-201ENST00000435908 TNS4Q8IZW8 715 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms