RNA–Protein interactions for RNA: ENST00000434101.6

TRAPPC4-202, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2 BASIC

Gene TRAPPC4, Length 794 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-202ENST00000434101 NGEFQ8N5V2 710 aa17.21■□□□□ 0.35
TRAPPC4-202ENST00000434101 CNBD1Q8NA66 436 aa17.21■□□□□ 0.35
TRAPPC4-202ENST00000434101 PDZRN3Q9UPQ7 1066 aa17.21■□□□□ 0.35
TRAPPC4-202ENST00000434101 ERVV-1B6SEH8 477 aa17.2■□□□□ 0.34
TRAPPC4-202ENST00000434101 ST5P78524 1137 aa17.2■□□□□ 0.34
TRAPPC4-202ENST00000434101 PRR5LQ6MZQ0 368 aa17.2■□□□□ 0.34
TRAPPC4-202ENST00000434101 GOLGB1Q14789 3259 aaKnown RBP17.2■□□□□ 0.34
TRAPPC4-202ENST00000434101 MAP3K15Q6ZN16 1313 aa17.2■□□□□ 0.34
TRAPPC4-202ENST00000434101 H0YIN7 160 aa17.19■□□□□ 0.34
TRAPPC4-202ENST00000434101 HOXB7P09629 217 aa17.19■□□□□ 0.34
TRAPPC4-202ENST00000434101 PDE6BP35913 854 aa17.19■□□□□ 0.34
TRAPPC4-202ENST00000434101 GNAI1P63096 354 aa17.19■□□□□ 0.34
TRAPPC4-202ENST00000434101 NBPF5PQ86XG9 351 aaPredicted RBP17.19■□□□□ 0.34
TRAPPC4-202ENST00000434101 C2CD5Q86YS7 1000 aa17.19■□□□□ 0.34
TRAPPC4-202ENST00000434101 ZNF784Q8NCA9 323 aaPredicted RBP17.19■□□□□ 0.34
TRAPPC4-202ENST00000434101 BRIP1Q9BX63 1249 aa17.19■□□□□ 0.34
TRAPPC4-202ENST00000434101 IFT57Q9NWB7 429 aa17.19■□□□□ 0.34
TRAPPC4-202ENST00000434101 NIP7Q9Y221 180 aaKnown RBP eCLIP17.19■□□□□ 0.34
TRAPPC4-202ENST00000434101 ZNF853P0CG23 659 aa17.17■□□□□ 0.34
TRAPPC4-202ENST00000434101 HLFQ16534 295 aa17.17■□□□□ 0.34
TRAPPC4-202ENST00000434101 TPTE2Q6XPS3 522 aa17.17■□□□□ 0.34
TRAPPC4-202ENST00000434101 TTLL7Q6ZT98 887 aa17.17■□□□□ 0.34
TRAPPC4-202ENST00000434101 MBIPQ9NS73 344 aa17.17■□□□□ 0.34
TRAPPC4-202ENST00000434101 PDIA6Q15084 440 aa17.16■□□□□ 0.34
TRAPPC4-202ENST00000434101 CCDC27Q2M243 656 aa17.16■□□□□ 0.34
TRAPPC4-202ENST00000434101 ARHGAP27Q6ZUM4 889 aa17.16■□□□□ 0.34
TRAPPC4-202ENST00000434101 TTLL6Q8N841 843 aa17.16■□□□□ 0.34
TRAPPC4-202ENST00000434101 ATP10DQ9P241 1426 aa17.15■□□□□ 0.34
TRAPPC4-202ENST00000434101 KRT24Q2M2I5 525 aa17.15■□□□□ 0.34
TRAPPC4-202ENST00000434101 NCBP3Q53F19 620 aaKnown RBP17.15■□□□□ 0.34
TRAPPC4-202ENST00000434101 NECTIN2Q92692 538 aa17.15■□□□□ 0.34
TRAPPC4-202ENST00000434101 ZBTB3Q9H5J0 574 aa17.15■□□□□ 0.34
TRAPPC4-202ENST00000434101 DDX21Q9NR30 783 aaKnown RBP eCLIP17.15■□□□□ 0.34
TRAPPC4-202ENST00000434101 COL11A2P13942 1736 aaPredicted RBP17.15■□□□□ 0.34
TRAPPC4-202ENST00000434101 CACNA1SQ13698 1873 aa17.14■□□□□ 0.33
TRAPPC4-202ENST00000434101 HDGFL1Q5TGJ6 251 aa17.14■□□□□ 0.33
TRAPPC4-202ENST00000434101 DUSP27Q5VZP5 1158 aa17.14■□□□□ 0.33
TRAPPC4-202ENST00000434101 GIGYF2Q6Y7W6 1299 aaKnown RBP17.14■□□□□ 0.33
TRAPPC4-202ENST00000434101 LRP10Q7Z4F1 713 aa17.14■□□□□ 0.33
TRAPPC4-202ENST00000434101 CCDC24Q8N4L8 307 aa17.14■□□□□ 0.33
TRAPPC4-202ENST00000434101 NYXQ9GZU5 481 aa17.14■□□□□ 0.33
TRAPPC4-202ENST00000434101 ANKRD36CQ5JPF3 1778 aa17.13■□□□□ 0.33
TRAPPC4-202ENST00000434101 ANXA1P04083 346 aa17.13■□□□□ 0.33
TRAPPC4-202ENST00000434101 GTF2E1P29083 439 aaPredicted RBP17.13■□□□□ 0.33
TRAPPC4-202ENST00000434101 PROSER3Q2NL68 480 aa17.13■□□□□ 0.33
TRAPPC4-202ENST00000434101 ZNF622Q969S3 477 aaKnown RBP eCLIP17.13■□□□□ 0.33
TRAPPC4-202ENST00000434101 CHMP4AQ9BY43 222 aa17.13■□□□□ 0.33
TRAPPC4-202ENST00000434101 SBF1O95248 1867 aa17.13■□□□□ 0.33
TRAPPC4-202ENST00000434101 ARFGEF2Q9Y6D5 1785 aa17.12■□□□□ 0.33
TRAPPC4-202ENST00000434101 FAM177BA6PVY3 158 aa17.12■□□□□ 0.33
TRAPPC4-202ENST00000434101 WWC1Q8IX03 1113 aa17.12■□□□□ 0.33
TRAPPC4-202ENST00000434101 DBF4Q9UBU7 674 aaPredicted RBP17.12■□□□□ 0.33
TRAPPC4-202ENST00000434101 ADCY9O60503 1353 aa17.12■□□□□ 0.33
TRAPPC4-202ENST00000434101 IBTKQ9P2D0 1353 aaPredicted RBP17.12■□□□□ 0.33
TRAPPC4-202ENST00000434101 PARP10Q53GL7 1025 aa17.11■□□□□ 0.33
TRAPPC4-202ENST00000434101 HSP90AB3PQ58FF7 597 aa17.11■□□□□ 0.33
TRAPPC4-202ENST00000434101 STYK1Q6J9G0 422 aa17.11■□□□□ 0.33
TRAPPC4-202ENST00000434101 COPS6Q7L5N1 327 aa17.11■□□□□ 0.33
TRAPPC4-202ENST00000434101 XAGE3Q8WTP9 111 aa17.11■□□□□ 0.33
TRAPPC4-202ENST00000434101 CNKSR1Q969H4 720 aa17.11■□□□□ 0.33
TRAPPC4-202ENST00000434101 CHPF2Q9P2E5 772 aa17.11■□□□□ 0.33
TRAPPC4-202ENST00000434101 CCDC88AQ3V6T2 1871 aa17.1■□□□□ 0.33
TRAPPC4-202ENST00000434101 SRGNP10124 158 aa17.1■□□□□ 0.33
TRAPPC4-202ENST00000434101 GPTP24298 496 aa17.1■□□□□ 0.33
TRAPPC4-202ENST00000434101 AIMP1Q12904 312 aaKnown RBP17.1■□□□□ 0.33
TRAPPC4-202ENST00000434101 ZNF34Q8IZ26 560 aa17.1■□□□□ 0.33
TRAPPC4-202ENST00000434101 FAM9BQ8IZU0 186 aa17.1■□□□□ 0.33
TRAPPC4-202ENST00000434101 MASTLQ96GX5 879 aa17.1■□□□□ 0.33
TRAPPC4-202ENST00000434101 HYPKQ9NX55 129 aa17.1■□□□□ 0.33
TRAPPC4-202ENST00000434101 IL16Q14005 1332 aa17.1■□□□□ 0.33
TRAPPC4-202ENST00000434101 PPP1R42Q7Z4L9 355 aa17.09■□□□□ 0.33
TRAPPC4-202ENST00000434101 SLX4Q8IY92 1834 aa17.09■□□□□ 0.33
TRAPPC4-202ENST00000434101 UBN2Q6ZU65 1347 aa17.08■□□□□ 0.32
TRAPPC4-202ENST00000434101 KLRG2A4D1S0 409 aaPredicted RBP17.08■□□□□ 0.32
TRAPPC4-202ENST00000434101 NPR1P16066 1061 aa17.08■□□□□ 0.32
TRAPPC4-202ENST00000434101 FER1L6Q2WGJ9 1857 aa17.07■□□□□ 0.32
TRAPPC4-202ENST00000434101 SENP3-EIF4A1A0A087X0R7 540 aa17.07■□□□□ 0.32
TRAPPC4-202ENST00000434101 ELL2O00472 640 aaPredicted RBP17.07■□□□□ 0.32
TRAPPC4-202ENST00000434101 SUSD4Q5VX71 490 aa17.07■□□□□ 0.32
TRAPPC4-202ENST00000434101 CACNA1FO60840 1977 aa17.07■□□□□ 0.32
TRAPPC4-202ENST00000434101 RIC1Q4ADV7 1423 aa17.06■□□□□ 0.32
TRAPPC4-202ENST00000434101 RNF123Q5XPI4 1314 aa17.06■□□□□ 0.32
TRAPPC4-202ENST00000434101 ERFEQ4G0M1 354 aa17.06■□□□□ 0.32
TRAPPC4-202ENST00000434101 SOGA3Q5TF21 947 aa17.06■□□□□ 0.32
TRAPPC4-202ENST00000434101 C9orf131Q5VYM1 1079 aa17.06■□□□□ 0.32
TRAPPC4-202ENST00000434101 NUTM1Q86Y26 1132 aa17.06■□□□□ 0.32
TRAPPC4-202ENST00000434101 WDR63Q8IWG1 891 aa17.06■□□□□ 0.32
TRAPPC4-202ENST00000434101 C8orf58Q8NAV2 365 aa17.06■□□□□ 0.32
TRAPPC4-202ENST00000434101 PLBD2Q8NHP8 589 aa17.06■□□□□ 0.32
TRAPPC4-202ENST00000434101 GPBP1L1Q9HC44 474 aaPredicted RBP17.06■□□□□ 0.32
TRAPPC4-202ENST00000434101 ABCC12Q96J65 1359 aa17.05■□□□□ 0.32
TRAPPC4-202ENST00000434101 TNRC6CQ9HCJ0 1690 aaKnown RBP17.05■□□□□ 0.32
TRAPPC4-202ENST00000434101 NTSR2O95665 410 aa17.05■□□□□ 0.32
TRAPPC4-202ENST00000434101 TCIRG1Q13488 830 aa17.05■□□□□ 0.32
TRAPPC4-202ENST00000434101 CCDC30Q5VVM6 783 aa17.05■□□□□ 0.32
TRAPPC4-202ENST00000434101 PRPF40BQ6NWY9 871 aaKnown RBP17.05■□□□□ 0.32
TRAPPC4-202ENST00000434101 ANKRD13DQ6ZTN6 518 aa17.05■□□□□ 0.32
TRAPPC4-202ENST00000434101 TSR2Q969E8 191 aaKnown RBP17.05■□□□□ 0.32
TRAPPC4-202ENST00000434101 UTP14AQ9BVJ6 771 aaKnown RBP17.05■□□□□ 0.32
TRAPPC4-202ENST00000434101 RNF181Q9P0P0 153 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms