RNA–Protein interactions for RNA: ENST00000434030.1

SEMA3B-205, Transcript of semaphorin 3B, humanhuman

TSL 3

Gene SEMA3B, Length 1,011 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-205ENST00000434030 HLFQ16534 295 aa29.02■■■□□ 2.24
SEMA3B-205ENST00000434030 CNBD1Q8NA66 436 aa29.02■■■□□ 2.24
SEMA3B-205ENST00000434030 CACNA1SQ13698 1873 aa29.02■■■□□ 2.24
SEMA3B-205ENST00000434030 CCDC88AQ3V6T2 1871 aa29.02■■■□□ 2.24
SEMA3B-205ENST00000434030 PDE6BP35913 854 aa29.01■■■□□ 2.23
SEMA3B-205ENST00000434030 NPHP1O15259 732 aa29■■■□□ 2.23
SEMA3B-205ENST00000434030 MYL6BP14649 208 aa29■■■□□ 2.23
SEMA3B-205ENST00000434030 TTLL6Q8N841 843 aa29■■■□□ 2.23
SEMA3B-205ENST00000434030 PDZRN3Q9UPQ7 1066 aa29■■■□□ 2.23
SEMA3B-205ENST00000434030 CHL1O00533 1208 aa28.99■■■□□ 2.23
SEMA3B-205ENST00000434030 NIP7Q9Y221 180 aaKnown RBP eCLIP28.99■■■□□ 2.23
SEMA3B-205ENST00000434030 ERBB4Q15303 1308 aa28.98■■■□□ 2.23
SEMA3B-205ENST00000434030 ST5P78524 1137 aa28.98■■■□□ 2.23
SEMA3B-205ENST00000434030 NBPF5PQ86XG9 351 aaPredicted RBP28.98■■■□□ 2.23
SEMA3B-205ENST00000434030 ZNF526Q8TF50 670 aaPredicted RBP28.98■■■□□ 2.23
SEMA3B-205ENST00000434030 GPBP1L1Q9HC44 474 aaPredicted RBP28.98■■■□□ 2.23
SEMA3B-205ENST00000434030 ERVV-1B6SEH8 477 aa28.97■■■□□ 2.23
SEMA3B-205ENST00000434030 EIF2S2P20042 333 aaKnown RBP28.97■■■□□ 2.23
SEMA3B-205ENST00000434030 C1QTNF8P60827 252 aa28.97■■■□□ 2.23
SEMA3B-205ENST00000434030 TTLL7Q6ZT98 887 aa28.97■■■□□ 2.23
SEMA3B-205ENST00000434030 LAS1LQ9Y4W2 734 aaKnown RBP28.97■■■□□ 2.23
SEMA3B-205ENST00000434030 MAP3K15Q6ZN16 1313 aa28.96■■■□□ 2.23
SEMA3B-205ENST00000434030 CCDC184Q52MB2 194 aa28.96■■■□□ 2.23
SEMA3B-205ENST00000434030 ZNF622Q969S3 477 aaKnown RBP eCLIP28.96■■■□□ 2.23
SEMA3B-205ENST00000434030 APAF1O14727 1248 aa28.95■■■□□ 2.22
SEMA3B-205ENST00000434030 C9orf131Q5VYM1 1079 aa28.95■■■□□ 2.22
SEMA3B-205ENST00000434030 SLX4Q8IY92 1834 aa28.94■■■□□ 2.22
SEMA3B-205ENST00000434030 ARFGEF2Q9Y6D5 1785 aa28.94■■■□□ 2.22
SEMA3B-205ENST00000434030 PDIA6Q15084 440 aa28.94■■■□□ 2.22
SEMA3B-205ENST00000434030 TPTE2Q6XPS3 522 aa28.94■■■□□ 2.22
SEMA3B-205ENST00000434030 KIF6Q6ZMV9 814 aa28.94■■■□□ 2.22
SEMA3B-205ENST00000434030 FAM177BA6PVY3 158 aa28.92■■■□□ 2.22
SEMA3B-205ENST00000434030 KRT24Q2M2I5 525 aa28.92■■■□□ 2.22
SEMA3B-205ENST00000434030 LRP10Q7Z4F1 713 aa28.92■■■□□ 2.22
SEMA3B-205ENST00000434030 FER1L6Q2WGJ9 1857 aa28.91■■■□□ 2.22
SEMA3B-205ENST00000434030 SRGNP10124 158 aa28.91■■■□□ 2.22
SEMA3B-205ENST00000434030 ZBTB3Q9H5J0 574 aa28.91■■■□□ 2.22
SEMA3B-205ENST00000434030 PROSER3Q2NL68 480 aa28.9■■■□□ 2.22
SEMA3B-205ENST00000434030 CFAP44Q96MT7 982 aa28.9■■■□□ 2.22
SEMA3B-205ENST00000434030 ANXA1P04083 346 aa28.89■■■□□ 2.22
SEMA3B-205ENST00000434030 STYK1Q6J9G0 422 aa28.89■■■□□ 2.22
SEMA3B-205ENST00000434030 NECTIN2Q92692 538 aa28.89■■■□□ 2.22
SEMA3B-205ENST00000434030 MASTLQ96GX5 879 aa28.89■■■□□ 2.22
SEMA3B-205ENST00000434030 RNF181Q9P0P0 153 aa28.89■■■□□ 2.22
SEMA3B-205ENST00000434030 RASSF7Q02833 373 aa28.88■■■□□ 2.21
SEMA3B-205ENST00000434030 CNKSR1Q969H4 720 aa28.88■■■□□ 2.21
SEMA3B-205ENST00000434030 KLRG2A4D1S0 409 aaPredicted RBP28.87■■■□□ 2.21
SEMA3B-205ENST00000434030 GIGYF2Q6Y7W6 1299 aaKnown RBP28.87■■■□□ 2.21
SEMA3B-205ENST00000434030 ZNF219Q9P2Y4 722 aaPredicted RBP28.86■■■□□ 2.21
SEMA3B-205ENST00000434030 DICER1Q9UPY3 1922 aaKnown RBP28.86■■■□□ 2.21
SEMA3B-205ENST00000434030 ANKRD36CQ5JPF3 1778 aa28.85■■■□□ 2.21
SEMA3B-205ENST00000434030 ANP32CO43423 234 aa28.85■■■□□ 2.21
SEMA3B-205ENST00000434030 C21orf2O43822 256 aa28.85■■■□□ 2.21
SEMA3B-205ENST00000434030 ZNF853P0CG23 659 aa28.85■■■□□ 2.21
SEMA3B-205ENST00000434030 GPTP24298 496 aa28.85■■■□□ 2.21
SEMA3B-205ENST00000434030 GTF2E1P29083 439 aaPredicted RBP28.85■■■□□ 2.21
SEMA3B-205ENST00000434030 ZNF34Q8IZ26 560 aa28.85■■■□□ 2.21
SEMA3B-205ENST00000434030 NYXQ9GZU5 481 aa28.85■■■□□ 2.21
SEMA3B-205ENST00000434030 MBIPQ9NS73 344 aa28.85■■■□□ 2.21
SEMA3B-205ENST00000434030 UBN2Q6ZU65 1347 aa28.85■■■□□ 2.21
SEMA3B-205ENST00000434030 PRELPP51888 382 aa28.84■■■□□ 2.21
SEMA3B-205ENST00000434030 TNRC6CQ9HCJ0 1690 aaKnown RBP28.83■■■□□ 2.21
SEMA3B-205ENST00000434030 NFKBIEO00221 500 aa28.83■■■□□ 2.21
SEMA3B-205ENST00000434030 PRPF40BQ6NWY9 871 aaKnown RBP28.83■■■□□ 2.21
SEMA3B-205ENST00000434030 COPS6Q7L5N1 327 aa28.83■■■□□ 2.21
SEMA3B-205ENST00000434030 NUTM1Q86Y26 1132 aa28.83■■■□□ 2.21
SEMA3B-205ENST00000434030 DDX21Q9NR30 783 aaKnown RBP eCLIP28.83■■■□□ 2.21
SEMA3B-205ENST00000434030 KIF3CO14782 793 aa28.82■■■□□ 2.2
SEMA3B-205ENST00000434030 HOXB7P09629 217 aa28.82■■■□□ 2.2
SEMA3B-205ENST00000434030 NPR1P16066 1061 aa28.82■■■□□ 2.2
SEMA3B-205ENST00000434030 LMNB1P20700 586 aa28.82■■■□□ 2.2
SEMA3B-205ENST00000434030 SUSD4Q5VX71 490 aa28.82■■■□□ 2.2
SEMA3B-205ENST00000434030 CALD1Q05682 793 aaKnown RBP28.81■■■□□ 2.2
SEMA3B-205ENST00000434030 XAGE3Q8WTP9 111 aa28.81■■■□□ 2.2
SEMA3B-205ENST00000434030 IFT57Q9NWB7 429 aa28.81■■■□□ 2.2
SEMA3B-205ENST00000434030 TIAM2Q8IVF5 1701 aa28.8■■■□□ 2.2
SEMA3B-205ENST00000434030 IBTKQ9P2D0 1353 aaPredicted RBP28.8■■■□□ 2.2
SEMA3B-205ENST00000434030 GNAI1P63096 354 aa28.8■■■□□ 2.2
SEMA3B-205ENST00000434030 AIMP1Q12904 312 aaKnown RBP28.8■■■□□ 2.2
SEMA3B-205ENST00000434030 ERFEQ4G0M1 354 aa28.8■■■□□ 2.2
SEMA3B-205ENST00000434030 HDGFL1Q5TGJ6 251 aa28.8■■■□□ 2.2
SEMA3B-205ENST00000434030 DUSP27Q5VZP5 1158 aa28.8■■■□□ 2.2
SEMA3B-205ENST00000434030 MRS2Q9HD23 443 aa28.8■■■□□ 2.2
SEMA3B-205ENST00000434030 CHPF2Q9P2E5 772 aa28.8■■■□□ 2.2
SEMA3B-205ENST00000434030 ABCC12Q96J65 1359 aa28.79■■■□□ 2.2
SEMA3B-205ENST00000434030 NTSR2O95665 410 aa28.77■■■□□ 2.2
SEMA3B-205ENST00000434030 PARP10Q53GL7 1025 aa28.77■■■□□ 2.2
SEMA3B-205ENST00000434030 PPP1R42Q7Z4L9 355 aa28.77■■■□□ 2.2
SEMA3B-205ENST00000434030 C7orf43Q8WVR3 580 aa28.77■■■□□ 2.2
SEMA3B-205ENST00000434030 NMRK2Q9NPI5 230 aa28.77■■■□□ 2.2
SEMA3B-205ENST00000434030 ZC3H4Q9UPT8 1303 aaKnown RBP28.76■■■□□ 2.19
SEMA3B-205ENST00000434030 SENP3-EIF4A1A0A087X0R7 540 aa28.76■■■□□ 2.19
SEMA3B-205ENST00000434030 DBF4Q9UBU7 674 aaPredicted RBP28.76■■■□□ 2.19
SEMA3B-205ENST00000434030 CRY2Q49AN0 593 aa28.75■■■□□ 2.19
SEMA3B-205ENST00000434030 SOGA3Q5TF21 947 aa28.75■■■□□ 2.19
SEMA3B-205ENST00000434030 RIC1Q4ADV7 1423 aa28.75■■■□□ 2.19
SEMA3B-205ENST00000434030 KDM2BQ8NHM5 1336 aa28.74■■■□□ 2.19
SEMA3B-205ENST00000434030 ALDH1B1P30837 517 aa28.74■■■□□ 2.19
SEMA3B-205ENST00000434030 LTBP3Q9NS15 1303 aa28.73■■■□□ 2.19
SEMA3B-205ENST00000434030 HSP90AB3PQ58FF7 597 aa28.73■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms