RNA–Protein interactions for RNA: ENST00000433709.6

HDAC9-213, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 602 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-213ENST00000433709 EFHC2Q5JST6 749 aa10.15□□□□□ -0.78
HDAC9-213ENST00000433709 PHLDB3Q6NSJ2 640 aa10.15□□□□□ -0.78
HDAC9-213ENST00000433709 TREML4Q6UXN2 200 aa10.15□□□□□ -0.78
HDAC9-213ENST00000433709 RHPN1Q8TCX5 695 aa10.15□□□□□ -0.78
HDAC9-213ENST00000433709 GPR25O00155 361 aa10.14□□□□□ -0.79
HDAC9-213ENST00000433709 VSIG8P0DPA2 414 aa10.14□□□□□ -0.79
HDAC9-213ENST00000433709 UBAP2LQ14157 1087 aaKnown RBP10.14□□□□□ -0.79
HDAC9-213ENST00000433709 LRRC69Q6ZNQ3 347 aa10.14□□□□□ -0.79
HDAC9-213ENST00000433709 IRF7Q92985 503 aa10.14□□□□□ -0.79
HDAC9-213ENST00000433709 GMCL1Q96IK5 515 aa10.14□□□□□ -0.79
HDAC9-213ENST00000433709 QTRT2Q9H974 415 aaKnown RBP10.14□□□□□ -0.79
HDAC9-213ENST00000433709 BAZ1AQ9NRL2 1556 aaPredicted RBP10.14□□□□□ -0.79
HDAC9-213ENST00000433709 NAA30Q147X3 362 aaPredicted RBP10.13□□□□□ -0.79
HDAC9-213ENST00000433709 HSH2DQ96JZ2 352 aa10.13□□□□□ -0.79
HDAC9-213ENST00000433709 LBRQ14739 615 aaKnown RBP10.12□□□□□ -0.79
HDAC9-213ENST00000433709 RTN1Q16799 776 aa10.12□□□□□ -0.79
HDAC9-213ENST00000433709 LCE2AQ5TA79 106 aaPredicted RBP10.12□□□□□ -0.79
HDAC9-213ENST00000433709 NLRP8Q86W28 1048 aa10.12□□□□□ -0.79
HDAC9-213ENST00000433709 ZNF280CQ8ND82 737 aa10.12□□□□□ -0.79
HDAC9-213ENST00000433709 ZCCHC2Q9C0B9 1178 aaKnown RBP10.12□□□□□ -0.79
HDAC9-213ENST00000433709 SAP130Q9H0E3 1048 aa10.12□□□□□ -0.79
HDAC9-213ENST00000433709 GJA3Q9Y6H8 435 aa10.12□□□□□ -0.79
HDAC9-213ENST00000433709 SUSD3Q96L08 255 aa10.11□□□□□ -0.79
HDAC9-213ENST00000433709 NEUROD4Q9HD90 331 aa10.11□□□□□ -0.79
HDAC9-213ENST00000433709 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.11□□□□□ -0.79
HDAC9-213ENST00000433709 KLK14Q9P0G3 267 aa10.11□□□□□ -0.79
HDAC9-213ENST00000433709 SEPT3Q9UH03 358 aa10.11□□□□□ -0.79
HDAC9-213ENST00000433709 LRFN2Q9ULH4 789 aa10.11□□□□□ -0.79
HDAC9-213ENST00000433709 ATAD2BQ9ULI0 1458 aa10.1□□□□□ -0.79
HDAC9-213ENST00000433709 PDE4CQ08493 712 aa10.1□□□□□ -0.79
HDAC9-213ENST00000433709 COX20Q5RI15 118 aa10.1□□□□□ -0.79
HDAC9-213ENST00000433709 COL26A1Q96A83 441 aa10.1□□□□□ -0.79
HDAC9-213ENST00000433709 GPC6Q9Y625 555 aaPredicted RBP10.1□□□□□ -0.79
HDAC9-213ENST00000433709 HMGXB3Q12766 1538 aa10.09□□□□□ -0.79
HDAC9-213ENST00000433709 SMARCA4P51532 1647 aa10.09□□□□□ -0.79
HDAC9-213ENST00000433709 PTCD1O75127 700 aaKnown RBP10.09□□□□□ -0.79
HDAC9-213ENST00000433709 GMPRP36959 345 aa10.09□□□□□ -0.79
HDAC9-213ENST00000433709 DGKZQ13574 1117 aa10.09□□□□□ -0.79
HDAC9-213ENST00000433709 FOXR1Q6PIV2 292 aa10.09□□□□□ -0.79
HDAC9-213ENST00000433709 MYO19Q96H55 970 aa10.09□□□□□ -0.79
HDAC9-213ENST00000433709 ATXN7O15265 892 aaPredicted RBP10.08□□□□□ -0.8
HDAC9-213ENST00000433709 BNIP3LO60238 219 aa10.08□□□□□ -0.8
HDAC9-213ENST00000433709 RNFT1Q5M7Z0 435 aa10.08□□□□□ -0.8
HDAC9-213ENST00000433709 FIGNL1Q6PIW4 674 aa10.08□□□□□ -0.8
HDAC9-213ENST00000433709 ABHD17AQ96GS6 310 aa10.08□□□□□ -0.8
HDAC9-213ENST00000433709 COL25A1Q9BXS0 654 aaPredicted RBP10.08□□□□□ -0.8
HDAC9-213ENST00000433709 BCS1LQ9Y276 419 aa10.08□□□□□ -0.8
HDAC9-213ENST00000433709 PCDHGC4Q9Y5F7 938 aa10.08□□□□□ -0.8
HDAC9-213ENST00000433709 KRT76Q01546 638 aa10.07□□□□□ -0.8
HDAC9-213ENST00000433709 GAS6Q14393 721 aa10.07□□□□□ -0.8
HDAC9-213ENST00000433709 C16orf46Q6P387 395 aa10.07□□□□□ -0.8
HDAC9-213ENST00000433709 TRERF1Q96PN7 1200 aa10.07□□□□□ -0.8
HDAC9-213ENST00000433709 NDFIP2Q9NV92 336 aa10.07□□□□□ -0.8
HDAC9-213ENST00000433709 ANKIB1Q9P2G1 1089 aa10.07□□□□□ -0.8
HDAC9-213ENST00000433709 DCDC2BA2VCK2 349 aa10.06□□□□□ -0.8
HDAC9-213ENST00000433709 C11orf91Q3C1V1 193 aa10.06□□□□□ -0.8
HDAC9-213ENST00000433709 HCN2Q9UL51 889 aa10.06□□□□□ -0.8
HDAC9-213ENST00000433709 KHNYNO15037 678 aaKnown RBP10.05□□□□□ -0.8
HDAC9-213ENST00000433709 TNP2Q05952 138 aa10.05□□□□□ -0.8
HDAC9-213ENST00000433709 SAMD5Q5TGI4 173 aa10.05□□□□□ -0.8
HDAC9-213ENST00000433709 CFHR5Q9BXR6 569 aa10.05□□□□□ -0.8
HDAC9-213ENST00000433709 BAZ1BQ9UIG0 1483 aaKnown RBP10.04□□□□□ -0.8
HDAC9-213ENST00000433709 B4GALNT3Q6L9W6 998 aa10.04□□□□□ -0.8
HDAC9-213ENST00000433709 IFT43Q96FT9 208 aa10.04□□□□□ -0.8
HDAC9-213ENST00000433709 CEP63Q96MT8 703 aa10.04□□□□□ -0.8
HDAC9-213ENST00000433709 CNTNAP3BQ96NU0 1288 aa10.04□□□□□ -0.8
HDAC9-213ENST00000433709 CNTNAP3Q9BZ76 1288 aa10.04□□□□□ -0.8
HDAC9-213ENST00000433709 DMGDHQ9UI17 866 aaKnown RBP10.04□□□□□ -0.8
HDAC9-213ENST00000433709 ATXN7L1Q9ULK2 861 aaPredicted RBP10.04□□□□□ -0.8
HDAC9-213ENST00000433709 PEG3Q9GZU2 1588 aa10.04□□□□□ -0.8
HDAC9-213ENST00000433709 TGFBR3LH3BV60 316 aa10.03□□□□□ -0.8
HDAC9-213ENST00000433709 TNFRSF10BO14763 440 aa10.03□□□□□ -0.8
HDAC9-213ENST00000433709 FAM157BP0CG42 384 aa10.03□□□□□ -0.8
HDAC9-213ENST00000433709 MAPTP10636 758 aaKnown RBP10.03□□□□□ -0.8
HDAC9-213ENST00000433709 HIF1AQ16665 826 aa10.03□□□□□ -0.8
HDAC9-213ENST00000433709 FAM26DQ5JW98 314 aa10.03□□□□□ -0.8
HDAC9-213ENST00000433709 BTLAQ7Z6A9 289 aa10.03□□□□□ -0.8
HDAC9-213ENST00000433709 GTF3C2Q8WUA4 911 aaPredicted RBP10.03□□□□□ -0.8
HDAC9-213ENST00000433709 STRN4Q9NRL3 753 aa10.03□□□□□ -0.8
HDAC9-213ENST00000433709 PHF24Q9UPV7 400 aa10.03□□□□□ -0.8
HDAC9-213ENST00000433709 EFSO43281 561 aa10.01□□□□□ -0.81
HDAC9-213ENST00000433709 CD33P20138 364 aa10.01□□□□□ -0.81
HDAC9-213ENST00000433709 FGFR3P22607 806 aa10.01□□□□□ -0.81
HDAC9-213ENST00000433709 CTBSQ01459 385 aa10.01□□□□□ -0.81
HDAC9-213ENST00000433709 TYRO3Q06418 890 aa10.01□□□□□ -0.81
HDAC9-213ENST00000433709 ETFBKMTQ8IXQ9 262 aa10.01□□□□□ -0.81
HDAC9-213ENST00000433709 TRAIPQ9BWF2 469 aa10.01□□□□□ -0.81
HDAC9-213ENST00000433709 DNMT3AQ9Y6K1 912 aaPredicted RBP10.01□□□□□ -0.81
HDAC9-213ENST00000433709 ERCC6Q03468 1493 aa10.01□□□□□ -0.81
HDAC9-213ENST00000433709 MICAL2O94851 1124 aa10□□□□□ -0.81
HDAC9-213ENST00000433709 MX2P20592 715 aa10□□□□□ -0.81
HDAC9-213ENST00000433709 ARID4AP29374 1257 aaPredicted RBP10□□□□□ -0.81
HDAC9-213ENST00000433709 SFSWAPQ12872 951 aaKnown RBP10□□□□□ -0.81
HDAC9-213ENST00000433709 MTMR3Q13615 1198 aa10□□□□□ -0.81
HDAC9-213ENST00000433709 GRIN2CQ14957 1233 aa10□□□□□ -0.81
HDAC9-213ENST00000433709 IER5Q5VY09 327 aa10□□□□□ -0.81
HDAC9-213ENST00000433709 BRD7Q9NPI1 651 aa10□□□□□ -0.81
HDAC9-213ENST00000433709 ANO2Q9NQ90 1003 aa10□□□□□ -0.81
HDAC9-213ENST00000433709 BRD1O95696 1058 aa9.99□□□□□ -0.81
HDAC9-213ENST00000433709 ABL1P00519 1130 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms