RNA–Protein interactions for RNA: ENST00000430858.1

HDAC6-207, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 618 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-207ENST00000430858 PDZRN3Q9UPQ7 1066 aa12.78□□□□□ -0.36
HDAC6-207ENST00000430858 KIAA1551Q9HCM1 1747 aa12.78□□□□□ -0.36
HDAC6-207ENST00000430858 MAP3K15Q6ZN16 1313 aa12.78□□□□□ -0.36
HDAC6-207ENST00000430858 ST5P78524 1137 aa12.77□□□□□ -0.37
HDAC6-207ENST00000430858 PDIA6Q15084 440 aa12.77□□□□□ -0.37
HDAC6-207ENST00000430858 HLFQ16534 295 aa12.77□□□□□ -0.37
HDAC6-207ENST00000430858 KRT24Q2M2I5 525 aa12.77□□□□□ -0.37
HDAC6-207ENST00000430858 DALRD3Q5D0E6 543 aaKnown RBP12.77□□□□□ -0.37
HDAC6-207ENST00000430858 PRR5LQ6MZQ0 368 aa12.77□□□□□ -0.37
HDAC6-207ENST00000430858 NIP7Q9Y221 180 aaKnown RBP eCLIP12.77□□□□□ -0.37
HDAC6-207ENST00000430858 GOLGB1Q14789 3259 aaKnown RBP12.77□□□□□ -0.37
HDAC6-207ENST00000430858 BCORQ6W2J9 1755 aa12.76□□□□□ -0.37
HDAC6-207ENST00000430858 H0YIN7 160 aa12.76□□□□□ -0.37
HDAC6-207ENST00000430858 PDE6BP35913 854 aa12.76□□□□□ -0.37
HDAC6-207ENST00000430858 TPTE2Q6XPS3 522 aa12.76□□□□□ -0.37
HDAC6-207ENST00000430858 TTLL7Q6ZT98 887 aa12.76□□□□□ -0.37
HDAC6-207ENST00000430858 LRP10Q7Z4F1 713 aa12.76□□□□□ -0.37
HDAC6-207ENST00000430858 NBPF5PQ86XG9 351 aaPredicted RBP12.76□□□□□ -0.37
HDAC6-207ENST00000430858 C2CD5Q86YS7 1000 aa12.76□□□□□ -0.37
HDAC6-207ENST00000430858 ZNF784Q8NCA9 323 aaPredicted RBP12.76□□□□□ -0.37
HDAC6-207ENST00000430858 N4BP2Q86UW6 1770 aaPredicted RBP12.76□□□□□ -0.37
HDAC6-207ENST00000430858 CHD4Q14839 1912 aa12.76□□□□□ -0.37
HDAC6-207ENST00000430858 AFDNP55196 1824 aaKnown RBP12.75□□□□□ -0.37
HDAC6-207ENST00000430858 DUSP27Q5VZP5 1158 aa12.75□□□□□ -0.37
HDAC6-207ENST00000430858 ZBTB3Q9H5J0 574 aa12.75□□□□□ -0.37
HDAC6-207ENST00000430858 DDX21Q9NR30 783 aaKnown RBP eCLIP12.75□□□□□ -0.37
HDAC6-207ENST00000430858 ATP10DQ9P241 1426 aa12.74□□□□□ -0.37
HDAC6-207ENST00000430858 PROSER3Q2NL68 480 aa12.74□□□□□ -0.37
HDAC6-207ENST00000430858 HDGFL1Q5TGJ6 251 aa12.74□□□□□ -0.37
HDAC6-207ENST00000430858 GIGYF2Q6Y7W6 1299 aaKnown RBP12.74□□□□□ -0.37
HDAC6-207ENST00000430858 ARHGAP27Q6ZUM4 889 aa12.74□□□□□ -0.37
HDAC6-207ENST00000430858 WWC1Q8IX03 1113 aa12.74□□□□□ -0.37
HDAC6-207ENST00000430858 CCDC24Q8N4L8 307 aa12.74□□□□□ -0.37
HDAC6-207ENST00000430858 NECTIN2Q92692 538 aa12.74□□□□□ -0.37
HDAC6-207ENST00000430858 ANXA1P04083 346 aa12.73□□□□□ -0.37
HDAC6-207ENST00000430858 TTLL6Q8N841 843 aa12.73□□□□□ -0.37
HDAC6-207ENST00000430858 NYXQ9GZU5 481 aa12.73□□□□□ -0.37
HDAC6-207ENST00000430858 CHPF2Q9P2E5 772 aa12.73□□□□□ -0.37
HDAC6-207ENST00000430858 DBF4Q9UBU7 674 aaPredicted RBP12.73□□□□□ -0.37
HDAC6-207ENST00000430858 IL16Q14005 1332 aa12.72□□□□□ -0.37
HDAC6-207ENST00000430858 GTF2E1P29083 439 aaPredicted RBP12.72□□□□□ -0.37
HDAC6-207ENST00000430858 COPS6Q7L5N1 327 aa12.72□□□□□ -0.37
HDAC6-207ENST00000430858 ZNF34Q8IZ26 560 aa12.72□□□□□ -0.37
HDAC6-207ENST00000430858 FAM9BQ8IZU0 186 aa12.72□□□□□ -0.37
HDAC6-207ENST00000430858 XAGE3Q8WTP9 111 aa12.72□□□□□ -0.37
HDAC6-207ENST00000430858 ZNF622Q969S3 477 aaKnown RBP eCLIP12.72□□□□□ -0.37
HDAC6-207ENST00000430858 CHMP4AQ9BY43 222 aa12.72□□□□□ -0.37
HDAC6-207ENST00000430858 BRCA1P38398 1863 aaKnown RBP12.72□□□□□ -0.37
HDAC6-207ENST00000430858 FAM177BA6PVY3 158 aa12.71□□□□□ -0.37
HDAC6-207ENST00000430858 SRGNP10124 158 aa12.71□□□□□ -0.37
HDAC6-207ENST00000430858 GPTP24298 496 aa12.71□□□□□ -0.37
HDAC6-207ENST00000430858 AIMP1Q12904 312 aaKnown RBP12.71□□□□□ -0.37
HDAC6-207ENST00000430858 PARP10Q53GL7 1025 aa12.71□□□□□ -0.37
HDAC6-207ENST00000430858 HSP90AB3PQ58FF7 597 aa12.71□□□□□ -0.37
HDAC6-207ENST00000430858 STYK1Q6J9G0 422 aa12.71□□□□□ -0.37
HDAC6-207ENST00000430858 MASTLQ96GX5 879 aa12.71□□□□□ -0.37
HDAC6-207ENST00000430858 HYPKQ9NX55 129 aa12.71□□□□□ -0.37
HDAC6-207ENST00000430858 ADCY9O60503 1353 aa12.7□□□□□ -0.38
HDAC6-207ENST00000430858 IBTKQ9P2D0 1353 aaPredicted RBP12.7□□□□□ -0.38
HDAC6-207ENST00000430858 UBN2Q6ZU65 1347 aa12.7□□□□□ -0.38
HDAC6-207ENST00000430858 SENP3-EIF4A1A0A087X0R7 540 aa12.7□□□□□ -0.38
HDAC6-207ENST00000430858 KLRG2A4D1S0 409 aaPredicted RBP12.7□□□□□ -0.38
HDAC6-207ENST00000430858 ELL2O00472 640 aaPredicted RBP12.7□□□□□ -0.38
HDAC6-207ENST00000430858 PPP1R42Q7Z4L9 355 aa12.7□□□□□ -0.38
HDAC6-207ENST00000430858 WDR63Q8IWG1 891 aa12.7□□□□□ -0.38
HDAC6-207ENST00000430858 CNKSR1Q969H4 720 aa12.7□□□□□ -0.38
HDAC6-207ENST00000430858 SUSD4Q5VX71 490 aa12.69□□□□□ -0.38
HDAC6-207ENST00000430858 C8orf58Q8NAV2 365 aa12.69□□□□□ -0.38
HDAC6-207ENST00000430858 PLBD2Q8NHP8 589 aa12.69□□□□□ -0.38
HDAC6-207ENST00000430858 ARFGEF1Q9Y6D6 1849 aa12.69□□□□□ -0.38
HDAC6-207ENST00000430858 ANKRD31Q8N7Z5 1873 aa12.68□□□□□ -0.38
HDAC6-207ENST00000430858 NPR1P16066 1061 aa12.68□□□□□ -0.38
HDAC6-207ENST00000430858 TCIRG1Q13488 830 aa12.68□□□□□ -0.38
HDAC6-207ENST00000430858 CCDC30Q5VVM6 783 aa12.68□□□□□ -0.38
HDAC6-207ENST00000430858 ANKRD13DQ6ZTN6 518 aa12.68□□□□□ -0.38
HDAC6-207ENST00000430858 NUTM1Q86Y26 1132 aa12.68□□□□□ -0.38
HDAC6-207ENST00000430858 TSR2Q969E8 191 aaKnown RBP12.68□□□□□ -0.38
HDAC6-207ENST00000430858 SALL2Q9Y467 1007 aaPredicted RBP12.68□□□□□ -0.38
HDAC6-207ENST00000430858 DLEC1Q9Y238 1755 aa12.68□□□□□ -0.38
HDAC6-207ENST00000430858 RNF123Q5XPI4 1314 aa12.67□□□□□ -0.38
HDAC6-207ENST00000430858 NTSR2O95665 410 aa12.67□□□□□ -0.38
HDAC6-207ENST00000430858 CRY2Q49AN0 593 aa12.67□□□□□ -0.38
HDAC6-207ENST00000430858 ERFEQ4G0M1 354 aa12.67□□□□□ -0.38
HDAC6-207ENST00000430858 C9orf131Q5VYM1 1079 aa12.67□□□□□ -0.38
HDAC6-207ENST00000430858 TSPYL6Q8N831 410 aa12.67□□□□□ -0.38
HDAC6-207ENST00000430858 UTP14AQ9BVJ6 771 aaKnown RBP12.67□□□□□ -0.38
HDAC6-207ENST00000430858 ABCC12Q96J65 1359 aa12.67□□□□□ -0.38
HDAC6-207ENST00000430858 NUP98P52948 1817 aa12.67□□□□□ -0.38
HDAC6-207ENST00000430858 RIC1Q4ADV7 1423 aa12.66□□□□□ -0.38
HDAC6-207ENST00000430858 C21orf2O43822 256 aa12.66□□□□□ -0.38
HDAC6-207ENST00000430858 ALDH1B1P30837 517 aa12.66□□□□□ -0.38
HDAC6-207ENST00000430858 GOLGA2Q08379 1002 aa12.66□□□□□ -0.38
HDAC6-207ENST00000430858 SOGA3Q5TF21 947 aa12.66□□□□□ -0.38
HDAC6-207ENST00000430858 PRPF40BQ6NWY9 871 aaKnown RBP12.66□□□□□ -0.38
HDAC6-207ENST00000430858 NLRP10Q86W26 655 aa12.66□□□□□ -0.38
HDAC6-207ENST00000430858 GPBP1L1Q9HC44 474 aaPredicted RBP12.66□□□□□ -0.38
HDAC6-207ENST00000430858 CCER2I3L3R5 266 aa12.65□□□□□ -0.38
HDAC6-207ENST00000430858 TWISTNBQ3B726 338 aaPredicted RBP12.65□□□□□ -0.38
HDAC6-207ENST00000430858 RNF181Q9P0P0 153 aa12.65□□□□□ -0.38
HDAC6-207ENST00000430858 COL11A2P13942 1736 aaPredicted RBP12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms