RNA–Protein interactions for RNA: ENST00000430533.1

PREB-204, Transcript of prolactin regulatory element binding, human

TSL 2

Gene PREB, Length 615 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PREB-204	ENST00000430533	RC3H1	Q5TC82	1133 aa	Known RBP	11.68	□□□□□ -0.54
PREB-204	ENST00000430533	DNAJC10	Q8IXB1	793 aa		11.68	□□□□□ -0.54
PREB-204	ENST00000430533	CCDC87	Q9NVE4	849 aa		11.68	□□□□□ -0.54
PREB-204	ENST00000430533	COL5A3	P25940	1745 aa	Predicted RBP	11.67	□□□□□ -0.54
PREB-204	ENST00000430533	ELL2	O00472	640 aa	Predicted RBP	11.67	□□□□□ -0.54
PREB-204	ENST00000430533	VAMP4	O75379	141 aa		11.67	□□□□□ -0.54
PREB-204	ENST00000430533	CENPB	P07199	599 aa	Predicted RBP	11.67	□□□□□ -0.54
PREB-204	ENST00000430533	CYP19A1	P11511	503 aa	Predicted RBP	11.67	□□□□□ -0.54
PREB-204	ENST00000430533	EIF2S2	P20042	333 aa	Known RBP	11.67	□□□□□ -0.54
PREB-204	ENST00000430533	CRKL	P46109	303 aa	Known RBP	11.67	□□□□□ -0.54
PREB-204	ENST00000430533	ITPK1	Q13572	414 aa		11.67	□□□□□ -0.54
PREB-204	ENST00000430533	KRT24	Q2M2I5	525 aa		11.67	□□□□□ -0.54
PREB-204	ENST00000430533	ALDH1L2	Q3SY69	923 aa		11.67	□□□□□ -0.54
PREB-204	ENST00000430533	TSPYL6	Q8N831	410 aa		11.67	□□□□□ -0.54
PREB-204	ENST00000430533	LINC00116	Q8NCU8	138 aa		11.67	□□□□□ -0.54
PREB-204	ENST00000430533	SLC4A9	Q96Q91	983 aa		11.67	□□□□□ -0.54
PREB-204	ENST00000430533	ADRA2B	P18089	450 aa		11.66	□□□□□ -0.54
PREB-204	ENST00000430533	SSFA2	P28290	1259 aa		11.66	□□□□□ -0.54
PREB-204	ENST00000430533	SMC1B	Q8NDV3	1235 aa		11.66	□□□□□ -0.54
PREB-204	ENST00000430533	DDX21	Q9NR30	783 aa	Known RBP eCLIP	11.66	□□□□□ -0.54
PREB-204	ENST00000430533	HYPK	Q9NX55	129 aa		11.66	□□□□□ -0.54
PREB-204	ENST00000430533	USP16	Q9Y5T5	823 aa		11.66	□□□□□ -0.54
PREB-204	ENST00000430533	ARFGEF1	Q9Y6D6	1849 aa		11.65	□□□□□ -0.54
PREB-204	ENST00000430533	KIF16B	Q96L93	1317 aa		11.65	□□□□□ -0.54
PREB-204	ENST00000430533	IL6ST	P40189	918 aa	Predicted RBP	11.65	□□□□□ -0.54
PREB-204	ENST00000430533	RTCB	Q9Y3I0	505 aa	Known RBP	11.65	□□□□□ -0.54
PREB-204	ENST00000430533	KDM2B	Q8NHM5	1336 aa		11.64	□□□□□ -0.55
PREB-204	ENST00000430533	C10orf71	Q711Q0	1435 aa		11.64	□□□□□ -0.55
PREB-204	ENST00000430533		A0A087WZG4	1122 aa		11.64	□□□□□ -0.55
PREB-204	ENST00000430533	PRAMEF22	A3QJZ6	481 aa		11.64	□□□□□ -0.55
PREB-204	ENST00000430533	GNPAT	O15228	680 aa		11.64	□□□□□ -0.55
PREB-204	ENST00000430533	RPS6KA4	O75676	772 aa		11.64	□□□□□ -0.55
PREB-204	ENST00000430533	SMC4	Q9NTJ3	1288 aa		11.64	□□□□□ -0.55
PREB-204	ENST00000430533	RNF181	Q9P0P0	153 aa		11.64	□□□□□ -0.55
PREB-204	ENST00000430533	CHPF2	Q9P2E5	772 aa		11.64	□□□□□ -0.55
PREB-204	ENST00000430533	DDX58	O95786	925 aa	Known RBP	11.63	□□□□□ -0.55
PREB-204	ENST00000430533	RARS	P54136	660 aa	Known RBP	11.63	□□□□□ -0.55
PREB-204	ENST00000430533	BRPF1	P55201	1214 aa	Predicted RBP	11.63	□□□□□ -0.55
PREB-204	ENST00000430533	PCDH10	Q9P2E7	1040 aa		11.63	□□□□□ -0.55
PREB-204	ENST00000430533	RCAN3	Q9UKA8	241 aa		11.63	□□□□□ -0.55
PREB-204	ENST00000430533	ZBTB1	Q9Y2K1	713 aa		11.63	□□□□□ -0.55
PREB-204	ENST00000430533	TNRC6C	Q9HCJ0	1690 aa	Known RBP	11.62	□□□□□ -0.55
PREB-204	ENST00000430533	CACNA1F	O60840	1977 aa		11.62	□□□□□ -0.55
PREB-204	ENST00000430533	RGL2	O15211	777 aa		11.62	□□□□□ -0.55
PREB-204	ENST00000430533	IPO8	O15397	1037 aa	Known RBP	11.62	□□□□□ -0.55
PREB-204	ENST00000430533	A1BG	P04217	495 aa		11.62	□□□□□ -0.55
PREB-204	ENST00000430533	SLC4A2	P04920	1241 aa		11.62	□□□□□ -0.55
PREB-204	ENST00000430533	CANX	P27824	592 aa	Known RBP	11.62	□□□□□ -0.55
PREB-204	ENST00000430533	INTS5	Q6P9B9	1019 aa	Known RBP	11.62	□□□□□ -0.55
PREB-204	ENST00000430533	KIF6	Q6ZMV9	814 aa		11.62	□□□□□ -0.55
PREB-204	ENST00000430533	GOLGA6L2	Q8N9W4	650 aa	Predicted RBP	11.62	□□□□□ -0.55
PREB-204	ENST00000430533	NECTIN2	Q92692	538 aa		11.62	□□□□□ -0.55
PREB-204	ENST00000430533	COL15A1	P39059	1388 aa		11.62	□□□□□ -0.55
PREB-204	ENST00000430533	PTPRC	P08575	1304 aa		11.61	□□□□□ -0.55
PREB-204	ENST00000430533	FOXN1	O15353	648 aa		11.61	□□□□□ -0.55
PREB-204	ENST00000430533	MYL6B	P14649	208 aa		11.61	□□□□□ -0.55
PREB-204	ENST00000430533	EIF5	P55010	431 aa	Known RBP	11.61	□□□□□ -0.55
PREB-204	ENST00000430533	TRAPPC3L	Q5T215	181 aa		11.61	□□□□□ -0.55
PREB-204	ENST00000430533	SSH1	Q8WYL5	1049 aa		11.61	□□□□□ -0.55
PREB-204	ENST00000430533	ZNF330	Q9Y3S2	320 aa	Predicted RBP	11.61	□□□□□ -0.55
PREB-204	ENST00000430533	CCDC88A	Q3V6T2	1871 aa		11.6	□□□□□ -0.55
PREB-204	ENST00000430533	POTEC	B2RU33	542 aa		11.6	□□□□□ -0.55
PREB-204	ENST00000430533	MS4A1	P11836	297 aa		11.6	□□□□□ -0.55
PREB-204	ENST00000430533	FLII	Q13045	1269 aa		11.6	□□□□□ -0.55
PREB-204	ENST00000430533	PDIA6	Q15084	440 aa		11.6	□□□□□ -0.55
PREB-204	ENST00000430533	FAM161A	Q3B820	660 aa		11.6	□□□□□ -0.55
PREB-204	ENST00000430533	ZNF652	Q9Y2D9	606 aa		11.6	□□□□□ -0.55
PREB-204	ENST00000430533	NBPF26	B4DH59	902 aa		11.59	□□□□□ -0.55
PREB-204	ENST00000430533	ZPR1	O75312	459 aa		11.59	□□□□□ -0.55
PREB-204	ENST00000430533	RFC4	P35249	363 aa		11.59	□□□□□ -0.55
PREB-204	ENST00000430533	FKBP5	Q13451	457 aa	Predicted RBP	11.59	□□□□□ -0.55
PREB-204	ENST00000430533	NBPF10	Q6P3W6	841 aa	Known RBP	11.59	□□□□□ -0.55
PREB-204	ENST00000430533	DZIP3	Q86Y13	1208 aa	Known RBP	11.59	□□□□□ -0.55
PREB-204	ENST00000430533	NLGN1	Q8N2Q7	840 aa		11.59	□□□□□ -0.55
PREB-204	ENST00000430533	MRPL50	Q8N5N7	158 aa	Known RBP	11.59	□□□□□ -0.55
PREB-204	ENST00000430533	NBPF15	Q8N660	670 aa		11.59	□□□□□ -0.55
PREB-204	ENST00000430533	ARHGAP45	Q92619	1136 aa		11.59	□□□□□ -0.55
PREB-204	ENST00000430533	ARHGEF1	Q92888	912 aa	Known RBP	11.59	□□□□□ -0.55
PREB-204	ENST00000430533	API5	Q9BZZ5	524 aa	Known RBP	11.59	□□□□□ -0.55
PREB-204	ENST00000430533	PIM2	Q9P1W9	311 aa		11.59	□□□□□ -0.55
PREB-204	ENST00000430533	C4A	P0C0L4	1744 aa		11.59	□□□□□ -0.55
PREB-204	ENST00000430533	ERVV-1	B6SEH8	477 aa		11.58	□□□□□ -0.56
PREB-204	ENST00000430533	TCERG1	O14776	1098 aa	Known RBP	11.58	□□□□□ -0.56
PREB-204	ENST00000430533	GYS1	P13807	737 aa		11.58	□□□□□ -0.56
PREB-204	ENST00000430533	VEGFA	P15692	232 aa	Predicted RBP	11.58	□□□□□ -0.56
PREB-204	ENST00000430533	HSP90AB3P	Q58FF7	597 aa		11.58	□□□□□ -0.56
PREB-204	ENST00000430533	COPS6	Q7L5N1	327 aa		11.58	□□□□□ -0.56
PREB-204	ENST00000430533	PLBD2	Q8NHP8	589 aa		11.58	□□□□□ -0.56
PREB-204	ENST00000430533	XAGE3	Q8WTP9	111 aa		11.58	□□□□□ -0.56
PREB-204	ENST00000430533	BCL2L13	Q9BXK5	485 aa		11.58	□□□□□ -0.56
PREB-204	ENST00000430533	MKRN1	Q9UHC7	482 aa	Known RBP	11.58	□□□□□ -0.56
PREB-204	ENST00000430533	MAP3K15	Q6ZN16	1313 aa		11.58	□□□□□ -0.56
PREB-204	ENST00000430533	MYH14	Q7Z406	1995 aa	Known RBP	11.58	□□□□□ -0.56
PREB-204	ENST00000430533	CHRNA5	P30532	468 aa		11.57	□□□□□ -0.56
PREB-204	ENST00000430533	NEXN	Q0ZGT2	675 aa		11.57	□□□□□ -0.56
PREB-204	ENST00000430533	AIMP1	Q12904	312 aa	Known RBP	11.57	□□□□□ -0.56
PREB-204	ENST00000430533	PROSER3	Q2NL68	480 aa		11.57	□□□□□ -0.56
PREB-204	ENST00000430533	DALRD3	Q5D0E6	543 aa	Known RBP	11.57	□□□□□ -0.56
PREB-204	ENST00000430533	ZKSCAN2	Q63HK3	967 aa		11.57	□□□□□ -0.56
PREB-204	ENST00000430533	CLEC4G	Q6UXB4	293 aa		11.57	□□□□□ -0.56

Retrieved 100 of 20,778 RNA–protein pairs in 72 ms