RNA–Protein interactions for RNA: ENST00000428848.7

CDH13-202, Transcript of cadherin 13, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CDH13, Length 2,195 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-202ENST00000428848 RHPN1Q8TCX5 695 aa10.61□□□□□ -0.71
CDH13-202ENST00000428848 GDPD2Q9HCC8 539 aa10.61□□□□□ -0.71
CDH13-202ENST00000428848 KDM3BQ7LBC6 1761 aa10.61□□□□□ -0.71
CDH13-202ENST00000428848 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.6□□□□□ -0.71
CDH13-202ENST00000428848 TOM1O60784 492 aa10.6□□□□□ -0.71
CDH13-202ENST00000428848 ZSCAN22P10073 491 aaPredicted RBP10.6□□□□□ -0.71
CDH13-202ENST00000428848 CCDC183Q5T5S1 534 aa10.6□□□□□ -0.71
CDH13-202ENST00000428848 RASEFQ8IZ41 740 aa10.6□□□□□ -0.71
CDH13-202ENST00000428848 MYRIPQ8NFW9 859 aa10.6□□□□□ -0.71
CDH13-202ENST00000428848 BBXQ8WY36 941 aaPredicted RBP10.6□□□□□ -0.71
CDH13-202ENST00000428848 IP6K1Q92551 441 aa10.6□□□□□ -0.71
CDH13-202ENST00000428848 NECTIN2Q92692 538 aa10.6□□□□□ -0.71
CDH13-202ENST00000428848 KIF1BPQ96EK5 621 aa10.6□□□□□ -0.71
CDH13-202ENST00000428848 CEMIPQ8WUJ3 1361 aa10.59□□□□□ -0.71
CDH13-202ENST00000428848 SURF6O75683 361 aaKnown RBP10.59□□□□□ -0.71
CDH13-202ENST00000428848 BRD2P25440 801 aaKnown RBP10.59□□□□□ -0.71
CDH13-202ENST00000428848 AK2P54819 239 aa10.59□□□□□ -0.71
CDH13-202ENST00000428848 ESCO1Q5FWF5 840 aa10.59□□□□□ -0.71
CDH13-202ENST00000428848 RUFY3Q7L099 469 aa10.59□□□□□ -0.71
CDH13-202ENST00000428848 KCNB2Q92953 911 aa10.59□□□□□ -0.71
CDH13-202ENST00000428848 PRIMPOLQ96LW4 560 aa10.59□□□□□ -0.71
CDH13-202ENST00000428848 FUCA2Q9BTY2 467 aa10.59□□□□□ -0.71
CDH13-202ENST00000428848 PHAXQ9H814 394 aaKnown RBP10.59□□□□□ -0.71
CDH13-202ENST00000428848 PHRF1Q9P1Y6 1649 aaKnown RBP10.59□□□□□ -0.71
CDH13-202ENST00000428848 SYT1P21579 422 aa10.59□□□□□ -0.71
CDH13-202ENST00000428848 ILDR2Q71H61 639 aa10.59□□□□□ -0.71
CDH13-202ENST00000428848 PRDM10Q9NQV6 1147 aa10.59□□□□□ -0.71
CDH13-202ENST00000428848 CNPY2Q9Y2B0 182 aa10.59□□□□□ -0.71
CDH13-202ENST00000428848 STX6O43752 255 aa10.58□□□□□ -0.72
CDH13-202ENST00000428848 F13A1P00488 732 aa10.58□□□□□ -0.72
CDH13-202ENST00000428848 GTF2F1P35269 517 aaKnown RBP eCLIP10.58□□□□□ -0.72
CDH13-202ENST00000428848 UBE2HP62256 183 aa10.58□□□□□ -0.72
CDH13-202ENST00000428848 HMGN5P82970 282 aaKnown RBP10.58□□□□□ -0.72
CDH13-202ENST00000428848 KIAA2012Q0VF49 1180 aa10.58□□□□□ -0.72
CDH13-202ENST00000428848 HDGFL1Q5TGJ6 251 aa10.58□□□□□ -0.72
CDH13-202ENST00000428848 TAF3Q5VWG9 929 aa10.58□□□□□ -0.72
CDH13-202ENST00000428848 CNTROBQ8N137 903 aa10.58□□□□□ -0.72
CDH13-202ENST00000428848 LIMCH1Q9UPQ0 1083 aa10.58□□□□□ -0.72
CDH13-202ENST00000428848 HSPA1LP34931 641 aa10.58□□□□□ -0.72
CDH13-202ENST00000428848 FOXD4L6Q3SYB3 417 aaPredicted RBP10.58□□□□□ -0.72
CDH13-202ENST00000428848 BEND3Q5T5X7 828 aa10.58□□□□□ -0.72
CDH13-202ENST00000428848 FOXD4L3Q6VB84 417 aaPredicted RBP10.58□□□□□ -0.72
CDH13-202ENST00000428848 PIBF1Q8WXW3 757 aa10.58□□□□□ -0.72
CDH13-202ENST00000428848 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.58□□□□□ -0.72
CDH13-202ENST00000428848 TTC41PQ6P2S7 1318 aa10.57□□□□□ -0.72
CDH13-202ENST00000428848 MAP4K4O95819 1239 aaPredicted RBP10.57□□□□□ -0.72
CDH13-202ENST00000428848 HOXB7P09629 217 aa10.57□□□□□ -0.72
CDH13-202ENST00000428848 NBPF7P0C2Y1 421 aaPredicted RBP10.57□□□□□ -0.72
CDH13-202ENST00000428848 MTX1Q13505 466 aa10.57□□□□□ -0.72
CDH13-202ENST00000428848 PPP4R3BQ5MIZ7 849 aa10.57□□□□□ -0.72
CDH13-202ENST00000428848 HYPKQ9NX55 129 aa10.57□□□□□ -0.72
CDH13-202ENST00000428848 SRGAP3O43295 1099 aa10.56□□□□□ -0.72
CDH13-202ENST00000428848 PTMAP06454 111 aaKnown RBP10.56□□□□□ -0.72
CDH13-202ENST00000428848 EIF4A1P60842 406 aaKnown RBP10.56□□□□□ -0.72
CDH13-202ENST00000428848 NUTM2GQ5VZR2 741 aa10.56□□□□□ -0.72
CDH13-202ENST00000428848 TM6SF1Q9BZW5 370 aa10.56□□□□□ -0.72
CDH13-202ENST00000428848 LARGE1O95461 756 aa10.56□□□□□ -0.72
CDH13-202ENST00000428848 ADCY5O95622 1261 aa10.56□□□□□ -0.72
CDH13-202ENST00000428848 AMOTQ4VCS5 1084 aa10.56□□□□□ -0.72
CDH13-202ENST00000428848 HSP90AB4PQ58FF6 505 aa10.56□□□□□ -0.72
CDH13-202ENST00000428848 SPTLC3Q9NUV7 552 aa10.56□□□□□ -0.72
CDH13-202ENST00000428848 USP25Q9UHP3 1055 aa10.56□□□□□ -0.72
CDH13-202ENST00000428848 STRCP1A6NGW2 1772 aa10.56□□□□□ -0.72
CDH13-202ENST00000428848 LTN1O94822 1766 aa10.56□□□□□ -0.72
CDH13-202ENST00000428848 KDM4AO75164 1064 aa10.55□□□□□ -0.72
CDH13-202ENST00000428848 GLRX3O76003 335 aaKnown RBP10.55□□□□□ -0.72
CDH13-202ENST00000428848 HCLS1P14317 486 aaPredicted RBP10.55□□□□□ -0.72
CDH13-202ENST00000428848 GTF2E1P29083 439 aaPredicted RBP10.55□□□□□ -0.72
CDH13-202ENST00000428848 ST3GAL1Q11201 340 aa10.55□□□□□ -0.72
CDH13-202ENST00000428848 VPS53Q5VIR6 699 aa10.55□□□□□ -0.72
CDH13-202ENST00000428848 DNAAF4Q8WXU2 420 aa10.55□□□□□ -0.72
CDH13-202ENST00000428848 ZSWIM6Q9HCJ5 1215 aa10.55□□□□□ -0.72
CDH13-202ENST00000428848 SMC3Q9UQE7 1217 aa10.55□□□□□ -0.72
CDH13-202ENST00000428848 MTMR6Q9Y217 621 aa10.55□□□□□ -0.72
CDH13-202ENST00000428848 ATP6V1DQ9Y5K8 247 aa10.55□□□□□ -0.72
CDH13-202ENST00000428848 LMO7Q8WWI1 1683 aa10.55□□□□□ -0.72
CDH13-202ENST00000428848 NFAT5O94916 1531 aa10.55□□□□□ -0.72
CDH13-202ENST00000428848 PLEKHO1Q53GL0 409 aaPredicted RBP10.55□□□□□ -0.72
CDH13-202ENST00000428848 CWC27Q6UX04 472 aaKnown RBP10.55□□□□□ -0.72
CDH13-202ENST00000428848 PROSER2Q86WR7 435 aaPredicted RBP10.55□□□□□ -0.72
CDH13-202ENST00000428848 LTV1Q96GA3 475 aaPredicted RBP10.55□□□□□ -0.72
CDH13-202ENST00000428848 ZSCAN31Q96LW9 406 aaPredicted RBP10.55□□□□□ -0.72
CDH13-202ENST00000428848 ADCY9O60503 1353 aa10.55□□□□□ -0.72
CDH13-202ENST00000428848 PTH1RQ03431 593 aa10.54□□□□□ -0.72
CDH13-202ENST00000428848 NOLC1Q14978 699 aaKnown RBP eCLIP10.54□□□□□ -0.72
CDH13-202ENST00000428848 C19orf44Q9H6X5 657 aa10.54□□□□□ -0.72
CDH13-202ENST00000428848 SH2B1Q9NRF2 756 aaPredicted RBP10.54□□□□□ -0.72
CDH13-202ENST00000428848 SPG7Q9UQ90 795 aa10.54□□□□□ -0.72
CDH13-202ENST00000428848 KIF1AQ12756 1690 aa10.54□□□□□ -0.72
CDH13-202ENST00000428848 PI4KAP2A4QPH2 592 aa10.53□□□□□ -0.72
CDH13-202ENST00000428848 CASTP20810 708 aaKnown RBP10.53□□□□□ -0.72
CDH13-202ENST00000428848 GJB2P29033 226 aa10.53□□□□□ -0.72
CDH13-202ENST00000428848 NECTIN1Q15223 517 aa10.53□□□□□ -0.72
CDH13-202ENST00000428848 ADCK5Q3MIX3 580 aa10.53□□□□□ -0.72
CDH13-202ENST00000428848 PI4KAP1Q8N8J0 262 aa10.53□□□□□ -0.72
CDH13-202ENST00000428848 ZNF830Q96NB3 372 aaPredicted RBP10.53□□□□□ -0.72
CDH13-202ENST00000428848 ARID3AQ99856 593 aa10.53□□□□□ -0.72
CDH13-202ENST00000428848 SNRKQ9NRH2 765 aa10.53□□□□□ -0.72
CDH13-202ENST00000428848 CPA1P15085 419 aa10.53□□□□□ -0.72
CDH13-202ENST00000428848 RUFY2Q8WXA3 655 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms