RNA–Protein interactions for RNA: ENST00000428554.6

CCDC30-203, Transcript of coiled-coil domain containing 30, humanhuman

APPRIS P2 TSL 5 BASIC

Gene CCDC30, Length 3,063 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC30-203ENST00000428554 PTK7Q13308 1070 aa4.57□□□□□ -1.68
CCDC30-203ENST00000428554 PLEKHG4Q58EX7 1191 aa4.57□□□□□ -1.68
CCDC30-203ENST00000428554 FILIP1Q7Z7B0 1213 aa4.57□□□□□ -1.68
CCDC30-203ENST00000428554 NT5DC4Q86YG4 428 aa4.57□□□□□ -1.68
CCDC30-203ENST00000428554 IL17RAQ96F46 866 aa4.57□□□□□ -1.68
CCDC30-203ENST00000428554 CEP63Q96MT8 703 aa4.57□□□□□ -1.68
CCDC30-203ENST00000428554 CASS4Q9NQ75 786 aa4.57□□□□□ -1.68
CCDC30-203ENST00000428554 ANP32CO43423 234 aa4.56□□□□□ -1.68
CCDC30-203ENST00000428554 EPB41L2O43491 1005 aaKnown RBP4.56□□□□□ -1.68
CCDC30-203ENST00000428554 TRIM32Q13049 653 aa4.56□□□□□ -1.68
CCDC30-203ENST00000428554 OXLD1Q5BKU9 147 aa4.56□□□□□ -1.68
CCDC30-203ENST00000428554 SVIPQ8NHG7 77 aa4.56□□□□□ -1.68
CCDC30-203ENST00000428554 MKL1Q969V6 931 aa4.56□□□□□ -1.68
CCDC30-203ENST00000428554 ZNF512BQ96KM6 892 aaPredicted RBP4.56□□□□□ -1.68
CCDC30-203ENST00000428554 WWC3Q9ULE0 1092 aa4.56□□□□□ -1.68
CCDC30-203ENST00000428554 NAP1L2Q9ULW6 460 aaPredicted RBP4.56□□□□□ -1.68
CCDC30-203ENST00000428554 IQSEC3Q9UPP2 1182 aaPredicted RBP4.56□□□□□ -1.68
CCDC30-203ENST00000428554 KIAA1024Q9UPX6 916 aa4.56□□□□□ -1.68
CCDC30-203ENST00000428554 FAM196BA6NMK8 535 aa4.56□□□□□ -1.68
CCDC30-203ENST00000428554 POU5F1Q01860 360 aaKnown RBP4.56□□□□□ -1.68
CCDC30-203ENST00000428554 NFE2L2Q16236 605 aa4.56□□□□□ -1.68
CCDC30-203ENST00000428554 PPP1R18Q6NYC8 613 aa4.56□□□□□ -1.68
CCDC30-203ENST00000428554 SLC10A4Q96EP9 437 aa4.56□□□□□ -1.68
CCDC30-203ENST00000428554 ZNF594Q96JF6 807 aaPredicted RBP4.56□□□□□ -1.68
CCDC30-203ENST00000428554 DOLKQ9UPQ8 538 aa4.56□□□□□ -1.68
CCDC30-203ENST00000428554 RAB15P59190 212 aa4.55□□□□□ -1.68
CCDC30-203ENST00000428554 MAPRE1Q15691 268 aaKnown RBP4.55□□□□□ -1.68
CCDC30-203ENST00000428554 EAPPQ56P03 285 aaPredicted RBP4.55□□□□□ -1.68
CCDC30-203ENST00000428554 EFCAB2Q5VUJ9 269 aa4.55□□□□□ -1.68
CCDC30-203ENST00000428554 C9orf131Q5VYM1 1079 aa4.55□□□□□ -1.68
CCDC30-203ENST00000428554 OGFOD1Q8N543 542 aa4.55□□□□□ -1.68
CCDC30-203ENST00000428554 APBA2Q99767 749 aa4.55□□□□□ -1.68
CCDC30-203ENST00000428554 EIF4ENIF1Q9NRA8 985 aaKnown RBP4.55□□□□□ -1.68
CCDC30-203ENST00000428554 BIN2Q9UBW5 565 aaPredicted RBP4.55□□□□□ -1.68
CCDC30-203ENST00000428554 CCDC189A1A4V9 331 aa4.55□□□□□ -1.68
CCDC30-203ENST00000428554 FANCCQ00597 558 aa4.55□□□□□ -1.68
CCDC30-203ENST00000428554 GNL2Q13823 731 aaKnown RBP4.55□□□□□ -1.68
CCDC30-203ENST00000428554 EML3Q32P44 896 aa4.55□□□□□ -1.68
CCDC30-203ENST00000428554 MAP7D1Q3KQU3 841 aa4.55□□□□□ -1.68
CCDC30-203ENST00000428554 EMID1Q96A84 441 aaPredicted RBP4.55□□□□□ -1.68
CCDC30-203ENST00000428554 ZNF700Q9H0M5 742 aa4.55□□□□□ -1.68
CCDC30-203ENST00000428554 CCSER2Q9H7U1 834 aa4.55□□□□□ -1.68
CCDC30-203ENST00000428554 NUB1Q9Y5A7 615 aa4.55□□□□□ -1.68
CCDC30-203ENST00000428554 ERCC6Q03468 1493 aa4.55□□□□□ -1.68
CCDC30-203ENST00000428554 ESPNB1AK53 854 aa4.54□□□□□ -1.68
CCDC30-203ENST00000428554 ATP5J2-PTCD1G3V325 749 aa4.54□□□□□ -1.68
CCDC30-203ENST00000428554 DKK1O94907 266 aa4.54□□□□□ -1.68
CCDC30-203ENST00000428554 AMPD3Q01432 767 aa4.54□□□□□ -1.68
CCDC30-203ENST00000428554 LARP1Q6PKG0 1096 aaKnown RBP4.54□□□□□ -1.68
CCDC30-203ENST00000428554 ANKLE1Q8NAG6 615 aa4.54□□□□□ -1.68
CCDC30-203ENST00000428554 INO80BQ9C086 356 aaPredicted RBP4.54□□□□□ -1.68
CCDC30-203ENST00000428554 CAPN10Q9HC96 672 aa4.54□□□□□ -1.68
CCDC30-203ENST00000428554 DCTN4Q9UJW0 460 aa4.54□□□□□ -1.68
CCDC30-203ENST00000428554 IFRD1O00458 451 aaPredicted RBP4.54□□□□□ -1.68
CCDC30-203ENST00000428554 ZBTB7BO15156 539 aaPredicted RBP4.54□□□□□ -1.68
CCDC30-203ENST00000428554 ITGAEP38570 1179 aa4.54□□□□□ -1.68
CCDC30-203ENST00000428554 DPYDQ12882 1025 aa4.54□□□□□ -1.68
CCDC30-203ENST00000428554 DHX8Q14562 1220 aaKnown RBP4.54□□□□□ -1.68
CCDC30-203ENST00000428554 ECM1Q16610 540 aa4.54□□□□□ -1.68
CCDC30-203ENST00000428554 CCDC96Q2M329 555 aa4.54□□□□□ -1.68
CCDC30-203ENST00000428554 CYB5RLQ6IPT4 315 aa4.54□□□□□ -1.68
CCDC30-203ENST00000428554 TRMT44Q8IYL2 757 aaKnown RBP4.54□□□□□ -1.68
CCDC30-203ENST00000428554 SAMD3Q8N6K7 520 aa4.54□□□□□ -1.68
CCDC30-203ENST00000428554 PMFBP1Q8TBY8 1022 aa4.54□□□□□ -1.68
CCDC30-203ENST00000428554 SNRNP27Q8WVK2 155 aaKnown RBP4.54□□□□□ -1.68
CCDC30-203ENST00000428554 AVENQ9NQS1 362 aaPredicted RBP4.54□□□□□ -1.68
CCDC30-203ENST00000428554 MRPL42Q9Y6G3 142 aaKnown RBP4.54□□□□□ -1.68
CCDC30-203ENST00000428554 ZBTB24O43167 697 aaPredicted RBP4.54□□□□□ -1.68
CCDC30-203ENST00000428554 SCNN1AP37088 669 aa4.54□□□□□ -1.68
CCDC30-203ENST00000428554 ANKMY2Q8IV38 441 aa4.54□□□□□ -1.68
CCDC30-203ENST00000428554 ZSCAN29Q8IWY8 852 aaPredicted RBP4.54□□□□□ -1.68
CCDC30-203ENST00000428554 FTSJ3Q8IY81 847 aaKnown RBP4.54□□□□□ -1.68
CCDC30-203ENST00000428554 RGL4Q8IZJ4 473 aa4.54□□□□□ -1.68
CCDC30-203ENST00000428554 RNF34Q969K3 372 aa4.54□□□□□ -1.68
CCDC30-203ENST00000428554 ANAPC4Q9UJX5 808 aa4.54□□□□□ -1.68
CCDC30-203ENST00000428554 G3BP2Q9UN86 482 aaKnown RBP4.54□□□□□ -1.68
CCDC30-203ENST00000428554 PCDHB11Q9Y5F2 797 aa4.54□□□□□ -1.68
CCDC30-203ENST00000428554 KIF3BO15066 747 aa4.53□□□□□ -1.68
CCDC30-203ENST00000428554 LGR5O75473 907 aa4.53□□□□□ -1.68
CCDC30-203ENST00000428554 FAM193AP78312 1265 aa4.53□□□□□ -1.68
CCDC30-203ENST00000428554 RASSF7Q02833 373 aa4.53□□□□□ -1.68
CCDC30-203ENST00000428554 ICE2Q659A1 982 aa4.53□□□□□ -1.68
CCDC30-203ENST00000428554 DNAAF2Q9NVR5 837 aaKnown RBP4.53□□□□□ -1.68
CCDC30-203ENST00000428554 NOD1Q9Y239 953 aa4.53□□□□□ -1.68
CCDC30-203ENST00000428554 RPGRIP1LQ68CZ1 1315 aa4.53□□□□□ -1.68
CCDC30-203ENST00000428554 VDRP11473 427 aa4.53□□□□□ -1.68
CCDC30-203ENST00000428554 CD53P19397 219 aa4.53□□□□□ -1.68
CCDC30-203ENST00000428554 SCTRP47872 440 aa4.53□□□□□ -1.68
CCDC30-203ENST00000428554 GTF2IP78347 998 aa4.53□□□□□ -1.68
CCDC30-203ENST00000428554 MAP9Q49MG5 647 aa4.53□□□□□ -1.68
CCDC30-203ENST00000428554 NBPF6Q5VWK0 638 aa4.53□□□□□ -1.68
CCDC30-203ENST00000428554 LIAT1Q6ZQX7 453 aa4.53□□□□□ -1.68
CCDC30-203ENST00000428554 FAM200AQ8TCP9 573 aa4.53□□□□□ -1.68
CCDC30-203ENST00000428554 NBPF4Q96M43 638 aa4.53□□□□□ -1.68
CCDC30-203ENST00000428554 KCTD15Q96SI1 283 aaPredicted RBP4.53□□□□□ -1.68
CCDC30-203ENST00000428554 TSPAN18Q96SJ8 248 aa4.53□□□□□ -1.68
CCDC30-203ENST00000428554 MAP3K20Q9NYL2 800 aaKnown RBP4.53□□□□□ -1.68
CCDC30-203ENST00000428554 TTF2Q9UNY4 1162 aaKnown RBP4.53□□□□□ -1.68
CCDC30-203ENST00000428554 PCDHGA11Q9Y5H2 935 aa4.53□□□□□ -1.68
CCDC30-203ENST00000428554 TTC36A6NLP5 189 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms