RNA–Protein interactions for RNA: ENST00000428534.1

GLI3-202, Transcript of GLI family zinc finger 3, humanhuman

TSL 4

Gene GLI3, Length 583 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GLI3-202ENST00000428534 NECTIN2Q92692 538 aa30.22■■■□□ 2.43
GLI3-202ENST00000428534 CAMTA2O94983 1202 aa30.21■■■□□ 2.43
GLI3-202ENST00000428534 TM4SF1P30408 202 aa30.19■■■□□ 2.42
GLI3-202ENST00000428534 HNRNPUQ00839 825 aaKnown RBP eCLIP30.19■■■□□ 2.42
GLI3-202ENST00000428534 STK31Q9BXU1 1019 aa30.19■■■□□ 2.42
GLI3-202ENST00000428534 SPINK5Q9NQ38 1064 aaPredicted RBP30.19■■■□□ 2.42
GLI3-202ENST00000428534 CHPF2Q9P2E5 772 aa30.19■■■□□ 2.42
GLI3-202ENST00000428534 EXOSC9Q06265 439 aaKnown RBP30.18■■■□□ 2.42
GLI3-202ENST00000428534 SLFN5Q08AF3 891 aa30.18■■■□□ 2.42
GLI3-202ENST00000428534 TSPYL6Q8N831 410 aa30.18■■■□□ 2.42
GLI3-202ENST00000428534 BCL2L12Q9HB09 334 aa30.18■■■□□ 2.42
GLI3-202ENST00000428534 MAP3K15Q6ZN16 1313 aa30.18■■■□□ 2.42
GLI3-202ENST00000428534 LRP10Q7Z4F1 713 aa30.16■■■□□ 2.42
GLI3-202ENST00000428534 SETDB2Q96T68 719 aa30.16■■■□□ 2.42
GLI3-202ENST00000428534 CD2APQ9Y5K6 639 aa30.15■■■□□ 2.42
GLI3-202ENST00000428534 SCN7AQ01118 1682 aa30.14■■■□□ 2.42
GLI3-202ENST00000428534 NFIXQ14938 502 aa30.14■■■□□ 2.42
GLI3-202ENST00000428534 COPS6Q7L5N1 327 aa30.14■■■□□ 2.42
GLI3-202ENST00000428534 VAMP4O75379 141 aa30.13■■■□□ 2.41
GLI3-202ENST00000428534 YBX3P16989 372 aaKnown RBP eCLIP30.13■■■□□ 2.41
GLI3-202ENST00000428534 PROSER3Q2NL68 480 aa30.13■■■□□ 2.41
GLI3-202ENST00000428534 HSP90AB3PQ58FF7 597 aa30.12■■■□□ 2.41
GLI3-202ENST00000428534 TBC1D9BQ66K14 1250 aa30.12■■■□□ 2.41
GLI3-202ENST00000428534 TTLL7Q6ZT98 887 aa30.12■■■□□ 2.41
GLI3-202ENST00000428534 XAGE3Q8WTP9 111 aa30.12■■■□□ 2.41
GLI3-202ENST00000428534 CARMIL3Q8ND23 1372 aa30.12■■■□□ 2.41
GLI3-202ENST00000428534 POLRMTO00411 1230 aaKnown RBP30.11■■■□□ 2.41
GLI3-202ENST00000428534 ANXA1P04083 346 aa30.11■■■□□ 2.41
GLI3-202ENST00000428534 AIMP1Q12904 312 aaKnown RBP30.11■■■□□ 2.41
GLI3-202ENST00000428534 GIGYF2Q6Y7W6 1299 aaKnown RBP30.11■■■□□ 2.41
GLI3-202ENST00000428534 BCORQ6W2J9 1755 aa30.1■■■□□ 2.41
GLI3-202ENST00000428534 DDX58O95786 925 aaKnown RBP30.1■■■□□ 2.41
GLI3-202ENST00000428534 BICDL1Q6ZP65 573 aa30.1■■■□□ 2.41
GLI3-202ENST00000428534 TRMT2AQ8IZ69 625 aaKnown RBP30.1■■■□□ 2.41
GLI3-202ENST00000428534 ZNF428Q96B54 188 aa30.1■■■□□ 2.41
GLI3-202ENST00000428534 SERPINB2P05120 415 aa30.09■■■□□ 2.41
GLI3-202ENST00000428534 CT47B1P0C2W7 299 aaPredicted RBP30.09■■■□□ 2.41
GLI3-202ENST00000428534 ANKRD13DQ6ZTN6 518 aa30.09■■■□□ 2.41
GLI3-202ENST00000428534 ZBTB3Q9H5J0 574 aa30.09■■■□□ 2.41
GLI3-202ENST00000428534 DDR1Q08345 913 aa30.08■■■□□ 2.41
GLI3-202ENST00000428534 PLBD2Q8NHP8 589 aa30.08■■■□□ 2.41
GLI3-202ENST00000428534 NIP7Q9Y221 180 aaKnown RBP eCLIP30.08■■■□□ 2.41
GLI3-202ENST00000428534 ZBED9Q6R2W3 1325 aa30.07■■■□□ 2.4
GLI3-202ENST00000428534 HLFQ16534 295 aa30.07■■■□□ 2.4
GLI3-202ENST00000428534 CDCA7LQ96GN5 454 aa30.06■■■□□ 2.4
GLI3-202ENST00000428534 ATP10DQ9P241 1426 aa30.05■■■□□ 2.4
GLI3-202ENST00000428534 NPHP1O15259 732 aa30.05■■■□□ 2.4
GLI3-202ENST00000428534 SLC4A2P04920 1241 aa30.05■■■□□ 2.4
GLI3-202ENST00000428534 TGFB2P61812 414 aa30.05■■■□□ 2.4
GLI3-202ENST00000428534 C1QTNF8P60827 252 aa30.04■■■□□ 2.4
GLI3-202ENST00000428534 PARP10Q53GL7 1025 aa30.04■■■□□ 2.4
GLI3-202ENST00000428534 TPTE2Q6XPS3 522 aa30.04■■■□□ 2.4
GLI3-202ENST00000428534 NYXQ9GZU5 481 aa30.04■■■□□ 2.4
GLI3-202ENST00000428534 RIC3Q7Z5B4 369 aa30.03■■■□□ 2.4
GLI3-202ENST00000428534 ST5P78524 1137 aa30.02■■■□□ 2.4
GLI3-202ENST00000428534 NBPF5PQ86XG9 351 aaPredicted RBP30.02■■■□□ 2.4
GLI3-202ENST00000428534 PHAXQ9H814 394 aaKnown RBP30.02■■■□□ 2.4
GLI3-202ENST00000428534 PDZRN3Q9UPQ7 1066 aa30.02■■■□□ 2.4
GLI3-202ENST00000428534 GRIN3BO60391 1043 aa30.01■■■□□ 2.39
GLI3-202ENST00000428534 TCIRG1Q13488 830 aa30.01■■■□□ 2.39
GLI3-202ENST00000428534 PPP1R42Q7Z4L9 355 aa30.01■■■□□ 2.39
GLI3-202ENST00000428534 ZNF34Q8IZ26 560 aa30.01■■■□□ 2.39
GLI3-202ENST00000428534 CNBD1Q8NA66 436 aa30.01■■■□□ 2.39
GLI3-202ENST00000428534 C10orf71Q711Q0 1435 aa30.01■■■□□ 2.39
GLI3-202ENST00000428534 GTF2E1P29083 439 aaPredicted RBP29.99■■■□□ 2.39
GLI3-202ENST00000428534 IBTKQ9P2D0 1353 aaPredicted RBP29.98■■■□□ 2.39
GLI3-202ENST00000428534 NRXN2Q9P2S2 1712 aa29.97■■■□□ 2.39
GLI3-202ENST00000428534 NUP98P52948 1817 aa29.97■■■□□ 2.39
GLI3-202ENST00000428534 TCERG1O14776 1098 aaKnown RBP29.97■■■□□ 2.39
GLI3-202ENST00000428534 FLIIQ13045 1269 aa29.97■■■□□ 2.39
GLI3-202ENST00000428534 KSR2Q6VAB6 950 aa29.97■■■□□ 2.39
GLI3-202ENST00000428534 RNF123Q5XPI4 1314 aa29.96■■■□□ 2.39
GLI3-202ENST00000428534 CACNA1FO60840 1977 aa29.96■■■□□ 2.39
GLI3-202ENST00000428534 PDE6BP35913 854 aa29.96■■■□□ 2.39
GLI3-202ENST00000428534 ALDH1L2Q3SY69 923 aa29.96■■■□□ 2.39
GLI3-202ENST00000428534 PRR5LQ6MZQ0 368 aa29.96■■■□□ 2.39
GLI3-202ENST00000428534 BRIP1Q9BX63 1249 aa29.96■■■□□ 2.39
GLI3-202ENST00000428534 GPTP24298 496 aa29.95■■■□□ 2.39
GLI3-202ENST00000428534 NEXNQ0ZGT2 675 aa29.94■■■□□ 2.38
GLI3-202ENST00000428534 TRIM28Q13263 835 aaKnown RBP29.94■■■□□ 2.38
GLI3-202ENST00000428534 FKBP5Q13451 457 aaPredicted RBP29.93■■■□□ 2.38
GLI3-202ENST00000428534 UTP14AQ9BVJ6 771 aaKnown RBP29.93■■■□□ 2.38
GLI3-202ENST00000428534 KIF13BQ9NQT8 1826 aa29.93■■■□□ 2.38
GLI3-202ENST00000428534 CEP350Q5VT06 3117 aa29.92■■■□□ 2.38
GLI3-202ENST00000428534 METTL22Q9BUU2 404 aaPredicted RBP29.92■■■□□ 2.38
GLI3-202ENST00000428534 WWC3Q9ULE0 1092 aa29.92■■■□□ 2.38
GLI3-202ENST00000428534 AFDNP55196 1824 aaKnown RBP29.92■■■□□ 2.38
GLI3-202ENST00000428534 PI4KAP2A4QPH2 592 aa29.91■■■□□ 2.38
GLI3-202ENST00000428534 NLRP10Q86W26 655 aa29.91■■■□□ 2.38
GLI3-202ENST00000428534 PI4KAP1Q8N8J0 262 aa29.91■■■□□ 2.38
GLI3-202ENST00000428534 ISCA1Q9BUE6 129 aa29.91■■■□□ 2.38
GLI3-202ENST00000428534 MAP3K2Q9Y2U5 619 aa29.91■■■□□ 2.38
GLI3-202ENST00000428534 UBN2Q6ZU65 1347 aa29.91■■■□□ 2.38
GLI3-202ENST00000428534 FAM177BA6PVY3 158 aa29.9■■■□□ 2.38
GLI3-202ENST00000428534 H0YIN7 160 aa29.9■■■□□ 2.38
GLI3-202ENST00000428534 SUSD4Q5VX71 490 aa29.9■■■□□ 2.38
GLI3-202ENST00000428534 G2E3Q7L622 706 aa29.9■■■□□ 2.38
GLI3-202ENST00000428534 KIAA1551Q9HCM1 1747 aa29.88■■■□□ 2.37
GLI3-202ENST00000428534 HSP90B1P14625 803 aaKnown RBP29.88■■■□□ 2.37
GLI3-202ENST00000428534 CCDC191Q8NCU4 936 aa29.88■■■□□ 2.37
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms