RNA–Protein interactions for RNA: ENST00000428101.6

LMO1-202, Transcript of LIM domain only 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LMO1, Length 1,038 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO1-202ENST00000428101 PRELPP51888 382 aa35.89■■■■□ 3.34
LMO1-202ENST00000428101 ST5P78524 1137 aa35.89■■■■□ 3.34
LMO1-202ENST00000428101 NMRK2Q9NPI5 230 aa35.89■■■■□ 3.34
LMO1-202ENST00000428101 HLFQ16534 295 aa35.88■■■■□ 3.33
LMO1-202ENST00000428101 NBPF5PQ86XG9 351 aaPredicted RBP35.88■■■■□ 3.33
LMO1-202ENST00000428101 CCDC88AQ3V6T2 1871 aa35.86■■■■□ 3.33
LMO1-202ENST00000428101 NIP7Q9Y221 180 aaKnown RBP eCLIP35.86■■■■□ 3.33
LMO1-202ENST00000428101 TSPYL4Q9UJ04 414 aa35.85■■■■□ 3.33
LMO1-202ENST00000428101 NFKBIEO00221 500 aa35.84■■■■□ 3.33
LMO1-202ENST00000428101 SRGNP10124 158 aa35.84■■■■□ 3.33
LMO1-202ENST00000428101 LMNB1P20700 586 aa35.84■■■■□ 3.33
LMO1-202ENST00000428101 CCDC146Q8IYE0 955 aa35.84■■■■□ 3.33
LMO1-202ENST00000428101 NGEFQ8N5V2 710 aa35.84■■■■□ 3.33
LMO1-202ENST00000428101 RRP7AQ9Y3A4 280 aaKnown RBP35.84■■■■□ 3.33
LMO1-202ENST00000428101 SLX4Q8IY92 1834 aa35.83■■■■□ 3.33
LMO1-202ENST00000428101 C21orf2O43822 256 aa35.82■■■■□ 3.32
LMO1-202ENST00000428101 STYK1Q6J9G0 422 aa35.82■■■■□ 3.32
LMO1-202ENST00000428101 NUP98P52948 1817 aa35.82■■■■□ 3.32
LMO1-202ENST00000428101 HSPA6P17066 643 aa35.81■■■■□ 3.32
LMO1-202ENST00000428101 LMOD3Q0VAK6 560 aa35.81■■■■□ 3.32
LMO1-202ENST00000428101 TPTE2Q6XPS3 522 aa35.81■■■■□ 3.32
LMO1-202ENST00000428101 PRKRIP1Q9H875 184 aaPredicted RBP35.81■■■■□ 3.32
LMO1-202ENST00000428101 CACNA1SQ13698 1873 aa35.81■■■■□ 3.32
LMO1-202ENST00000428101 FER1L6Q2WGJ9 1857 aa35.8■■■■□ 3.32
LMO1-202ENST00000428101 ERVV-1B6SEH8 477 aa35.8■■■■□ 3.32
LMO1-202ENST00000428101 TOMM70O94826 608 aa35.8■■■■□ 3.32
LMO1-202ENST00000428101 TTLL7Q6ZT98 887 aa35.8■■■■□ 3.32
LMO1-202ENST00000428101 CNKSR1Q969H4 720 aa35.8■■■■□ 3.32
LMO1-202ENST00000428101 MASTLQ96GX5 879 aa35.8■■■■□ 3.32
LMO1-202ENST00000428101 BABAM1Q9NWV8 329 aa35.8■■■■□ 3.32
LMO1-202ENST00000428101 ZNF219Q9P2Y4 722 aaPredicted RBP35.8■■■■□ 3.32
LMO1-202ENST00000428101 MYL6BP14649 208 aa35.79■■■■□ 3.32
LMO1-202ENST00000428101 MAP3K15Q6ZN16 1313 aa35.79■■■■□ 3.32
LMO1-202ENST00000428101 KDM2BQ8NHM5 1336 aa35.79■■■■□ 3.32
LMO1-202ENST00000428101 ZC3H4Q9UPT8 1303 aaKnown RBP35.79■■■■□ 3.32
LMO1-202ENST00000428101 KLRG2A4D1S0 409 aaPredicted RBP35.78■■■■□ 3.32
LMO1-202ENST00000428101 RUNDC1Q96C34 613 aa35.78■■■■□ 3.32
LMO1-202ENST00000428101 ADAMTS8Q9UP79 889 aa35.78■■■■□ 3.32
LMO1-202ENST00000428101 ARFGEF2Q9Y6D5 1785 aa35.78■■■■□ 3.32
LMO1-202ENST00000428101 FAM177BA6PVY3 158 aa35.77■■■■□ 3.32
LMO1-202ENST00000428101 WDR43Q15061 677 aaKnown RBP eCLIP35.77■■■■□ 3.32
LMO1-202ENST00000428101 NEUROD2Q15784 382 aa35.77■■■■□ 3.32
LMO1-202ENST00000428101 PRPF40BQ6NWY9 871 aaKnown RBP35.77■■■■□ 3.32
LMO1-202ENST00000428101 ERBB4Q15303 1308 aa35.76■■■■□ 3.31
LMO1-202ENST00000428101 TRIM35Q9UPQ4 493 aa35.75■■■■□ 3.31
LMO1-202ENST00000428101 KIF6Q6ZMV9 814 aa35.74■■■■□ 3.31
LMO1-202ENST00000428101 PDIA6Q15084 440 aa35.73■■■■□ 3.31
LMO1-202ENST00000428101 LRP10Q7Z4F1 713 aa35.73■■■■□ 3.31
LMO1-202ENST00000428101 RRAGCQ9HB90 399 aa35.73■■■■□ 3.31
LMO1-202ENST00000428101 TIAM2Q8IVF5 1701 aa35.73■■■■□ 3.31
LMO1-202ENST00000428101 TNRC6CQ9HCJ0 1690 aaKnown RBP35.72■■■■□ 3.31
LMO1-202ENST00000428101 DICER1Q9UPY3 1922 aaKnown RBP35.72■■■■□ 3.31
LMO1-202ENST00000428101 NPR1P16066 1061 aa35.71■■■■□ 3.31
LMO1-202ENST00000428101 EIF2S2P20042 333 aaKnown RBP35.71■■■■□ 3.31
LMO1-202ENST00000428101 ZBTB3Q9H5J0 574 aa35.71■■■■□ 3.31
LMO1-202ENST00000428101 C7orf43Q8WVR3 580 aa35.7■■■■□ 3.31
LMO1-202ENST00000428101 LTBP3Q9NS15 1303 aa35.69■■■■□ 3.3
LMO1-202ENST00000428101 GLTPD2A6NH11 291 aa35.69■■■■□ 3.3
LMO1-202ENST00000428101 CHL1O00533 1208 aa35.69■■■■□ 3.3
LMO1-202ENST00000428101 UBN2Q6ZU65 1347 aa35.68■■■■□ 3.3
LMO1-202ENST00000428101 GTF2E1P29083 439 aaPredicted RBP35.68■■■■□ 3.3
LMO1-202ENST00000428101 PROSER3Q2NL68 480 aa35.68■■■■□ 3.3
LMO1-202ENST00000428101 RBM46Q8TBY0 533 aaKnown RBP35.68■■■■□ 3.3
LMO1-202ENST00000428101 NUTM1Q86Y26 1132 aa35.67■■■■□ 3.3
LMO1-202ENST00000428101 C16orf71Q8IYS4 520 aaPredicted RBP35.67■■■■□ 3.3
LMO1-202ENST00000428101 NYXQ9GZU5 481 aa35.67■■■■□ 3.3
LMO1-202ENST00000428101 TAOK3Q9H2K8 898 aa35.67■■■■□ 3.3
LMO1-202ENST00000428101 ABCC12Q96J65 1359 aa35.66■■■■□ 3.3
LMO1-202ENST00000428101 GPTP24298 496 aa35.66■■■■□ 3.3
LMO1-202ENST00000428101 SOGA3Q5TF21 947 aa35.66■■■■□ 3.3
LMO1-202ENST00000428101 GIGYF2Q6Y7W6 1299 aaKnown RBP35.66■■■■□ 3.3
LMO1-202ENST00000428101 ZNF34Q8IZ26 560 aa35.66■■■■□ 3.3
LMO1-202ENST00000428101 ANXA1P04083 346 aa35.65■■■■□ 3.3
LMO1-202ENST00000428101 KRT24Q2M2I5 525 aa35.64■■■■□ 3.3
LMO1-202ENST00000428101 ERFEQ4G0M1 354 aa35.64■■■■□ 3.3
LMO1-202ENST00000428101 SUSD4Q5VX71 490 aa35.64■■■■□ 3.3
LMO1-202ENST00000428101 LAS1LQ9Y4W2 734 aaKnown RBP35.63■■■■□ 3.29
LMO1-202ENST00000428101 IBTKQ9P2D0 1353 aaPredicted RBP35.63■■■■□ 3.29
LMO1-202ENST00000428101 CRY2Q49AN0 593 aa35.62■■■■□ 3.29
LMO1-202ENST00000428101 NECTIN2Q92692 538 aa35.62■■■■□ 3.29
LMO1-202ENST00000428101 CCDC93Q567U6 631 aa35.6■■■■□ 3.29
LMO1-202ENST00000428101 APLP1P51693 650 aa35.59■■■■□ 3.29
LMO1-202ENST00000428101 OLFM4Q6UX06 510 aa35.59■■■■□ 3.29
LMO1-202ENST00000428101 NTSR2O95665 410 aa35.58■■■■□ 3.29
LMO1-202ENST00000428101 VEGFAP15692 232 aaPredicted RBP35.58■■■■□ 3.29
LMO1-202ENST00000428101 ALDH1B1P30837 517 aa35.58■■■■□ 3.29
LMO1-202ENST00000428101 FSTL1Q12841 308 aa35.58■■■■□ 3.29
LMO1-202ENST00000428101 RIC1Q4ADV7 1423 aa35.57■■■■□ 3.29
LMO1-202ENST00000428101 DPY19L2Q6NUT2 758 aa35.57■■■■□ 3.28
LMO1-202ENST00000428101 POTECB2RU33 542 aa35.56■■■■□ 3.28
LMO1-202ENST00000428101 COPS6Q7L5N1 327 aa35.56■■■■□ 3.28
LMO1-202ENST00000428101 WDR90Q96KV7 1748 aa35.56■■■■□ 3.28
LMO1-202ENST00000428101 PARP10Q53GL7 1025 aa35.55■■■■□ 3.28
LMO1-202ENST00000428101 XAGE3Q8WTP9 111 aa35.55■■■■□ 3.28
LMO1-202ENST00000428101 CFAP44Q96MT7 982 aa35.55■■■■□ 3.28
LMO1-202ENST00000428101 DDX21Q9NR30 783 aaKnown RBP eCLIP35.55■■■■□ 3.28
LMO1-202ENST00000428101 APAF1O14727 1248 aa35.54■■■■□ 3.28
LMO1-202ENST00000428101 PPP1R42Q7Z4L9 355 aa35.54■■■■□ 3.28
LMO1-202ENST00000428101 FKBP4Q02790 459 aaKnown RBP eCLIP35.53■■■■□ 3.28
LMO1-202ENST00000428101 AIMP1Q12904 312 aaKnown RBP35.53■■■■□ 3.28
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms