RNA–Protein interactions for RNA: ENST00000427566.2

CLK3P2-201, Transcript of CDC like kinase 3 pseudogene 2, humanhuman

BASIC

Gene CLK3P2, Length 1,453 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3P2-201ENST00000427566 PXDNLA1KZ92 1463 aa20.35■□□□□ 0.85
CLK3P2-201ENST00000427566 BRCA1P38398 1863 aaKnown RBP20.35■□□□□ 0.85
CLK3P2-201ENST00000427566 ELL2O00472 640 aaPredicted RBP20.35■□□□□ 0.85
CLK3P2-201ENST00000427566 TGFB2P61812 414 aa20.35■□□□□ 0.85
CLK3P2-201ENST00000427566 C8orf58Q8NAV2 365 aa20.35■□□□□ 0.85
CLK3P2-201ENST00000427566 NPHP1O15259 732 aa20.34■□□□□ 0.85
CLK3P2-201ENST00000427566 DUSP27Q5VZP5 1158 aa20.34■□□□□ 0.85
CLK3P2-201ENST00000427566 TSPYL6Q8N831 410 aa20.34■□□□□ 0.85
CLK3P2-201ENST00000427566 DPEP1P16444 411 aa20.33■□□□□ 0.85
CLK3P2-201ENST00000427566 SETDB2Q96T68 719 aa20.32■□□□□ 0.84
CLK3P2-201ENST00000427566 ZNF652Q9Y2D9 606 aa20.32■□□□□ 0.84
CLK3P2-201ENST00000427566 FANCIQ9NVI1 1328 aa20.32■□□□□ 0.84
CLK3P2-201ENST00000427566 GRIN3BO60391 1043 aa20.31■□□□□ 0.84
CLK3P2-201ENST00000427566 ANXA1P04083 346 aa20.31■□□□□ 0.84
CLK3P2-201ENST00000427566 PDIA6Q15084 440 aa20.31■□□□□ 0.84
CLK3P2-201ENST00000427566 KIF6Q6ZMV9 814 aa20.31■□□□□ 0.84
CLK3P2-201ENST00000427566 ANKRD31Q8N7Z5 1873 aa20.31■□□□□ 0.84
CLK3P2-201ENST00000427566 PROSER3Q2NL68 480 aa20.3■□□□□ 0.84
CLK3P2-201ENST00000427566 CCDC24Q8N4L8 307 aa20.3■□□□□ 0.84
CLK3P2-201ENST00000427566 YTHDC1Q96MU7 727 aaKnown RBP20.3■□□□□ 0.84
CLK3P2-201ENST00000427566 BCS1LQ9Y276 419 aa20.3■□□□□ 0.84
CLK3P2-201ENST00000427566 CARMIL3Q8ND23 1372 aa20.3■□□□□ 0.84
CLK3P2-201ENST00000427566 CACNA1SQ13698 1873 aa20.3■□□□□ 0.84
CLK3P2-201ENST00000427566 CHRNA5P30532 468 aa20.3■□□□□ 0.84
CLK3P2-201ENST00000427566 CDCA7LQ96GN5 454 aa20.3■□□□□ 0.84
CLK3P2-201ENST00000427566 FAM177BA6PVY3 158 aa20.29■□□□□ 0.84
CLK3P2-201ENST00000427566 HLFQ16534 295 aa20.29■□□□□ 0.84
CLK3P2-201ENST00000427566 TTLL7Q6ZT98 887 aa20.29■□□□□ 0.84
CLK3P2-201ENST00000427566 ERBB4Q15303 1308 aa20.29■□□□□ 0.84
CLK3P2-201ENST00000427566 HDGFL1Q5TGJ6 251 aa20.28■□□□□ 0.84
CLK3P2-201ENST00000427566 CLEC4GQ6UXB4 293 aa20.28■□□□□ 0.84
CLK3P2-201ENST00000427566 LRP10Q7Z4F1 713 aa20.28■□□□□ 0.84
CLK3P2-201ENST00000427566 ZBTB3Q9H5J0 574 aa20.28■□□□□ 0.84
CLK3P2-201ENST00000427566 NIP7Q9Y221 180 aaKnown RBP eCLIP20.28■□□□□ 0.84
CLK3P2-201ENST00000427566 DLEC1Q9Y238 1755 aa20.28■□□□□ 0.84
CLK3P2-201ENST00000427566 ARFGEF1Q9Y6D6 1849 aa20.28■□□□□ 0.84
CLK3P2-201ENST00000427566 HOXB7P09629 217 aa20.27■□□□□ 0.84
CLK3P2-201ENST00000427566 HNRNPUQ00839 825 aaKnown RBP eCLIP20.27■□□□□ 0.84
CLK3P2-201ENST00000427566 EXOSC9Q06265 439 aaKnown RBP20.27■□□□□ 0.84
CLK3P2-201ENST00000427566 GOLGA2Q08379 1002 aa20.27■□□□□ 0.84
CLK3P2-201ENST00000427566 CHPF2Q9P2E5 772 aa20.27■□□□□ 0.84
CLK3P2-201ENST00000427566 MAP3K15Q6ZN16 1313 aa20.26■□□□□ 0.83
CLK3P2-201ENST00000427566 AIMP1Q12904 312 aaKnown RBP20.26■□□□□ 0.83
CLK3P2-201ENST00000427566 PRR5LQ6MZQ0 368 aa20.26■□□□□ 0.83
CLK3P2-201ENST00000427566 CNBD1Q8NA66 436 aa20.26■□□□□ 0.83
CLK3P2-201ENST00000427566 PIM2Q9P1W9 311 aa20.26■□□□□ 0.83
CLK3P2-201ENST00000427566 ST5P78524 1137 aa20.25■□□□□ 0.83
CLK3P2-201ENST00000427566 NBPF5PQ86XG9 351 aaPredicted RBP20.25■□□□□ 0.83
CLK3P2-201ENST00000427566 TCERG1O14776 1098 aaKnown RBP20.24■□□□□ 0.83
CLK3P2-201ENST00000427566 KCNA3P22001 575 aa20.24■□□□□ 0.83
CLK3P2-201ENST00000427566 SLFN5Q08AF3 891 aa20.24■□□□□ 0.83
CLK3P2-201ENST00000427566 TWISTNBQ3B726 338 aaPredicted RBP20.24■□□□□ 0.83
CLK3P2-201ENST00000427566 C2CD5Q86YS7 1000 aa20.24■□□□□ 0.83
CLK3P2-201ENST00000427566 MYH16Q9H6N6 1097 aa20.24■□□□□ 0.83
CLK3P2-201ENST00000427566 ANKRD36CQ5JPF3 1778 aa20.24■□□□□ 0.83
CLK3P2-201ENST00000427566 COL11A2P13942 1736 aaPredicted RBP20.24■□□□□ 0.83
CLK3P2-201ENST00000427566 DDX21Q9NR30 783 aaKnown RBP eCLIP20.24■□□□□ 0.83
CLK3P2-201ENST00000427566 ERVV-1B6SEH8 477 aa20.23■□□□□ 0.83
CLK3P2-201ENST00000427566 H0YIN7 160 aa20.23■□□□□ 0.83
CLK3P2-201ENST00000427566 GPTP24298 496 aa20.23■□□□□ 0.83
CLK3P2-201ENST00000427566 GTF2E1P29083 439 aaPredicted RBP20.23■□□□□ 0.83
CLK3P2-201ENST00000427566 DALRD3Q5D0E6 543 aaKnown RBP20.23■□□□□ 0.83
CLK3P2-201ENST00000427566 E9PSI1 815 aa20.22■□□□□ 0.83
CLK3P2-201ENST00000427566 VAMP4O75379 141 aa20.22■□□□□ 0.83
CLK3P2-201ENST00000427566 PDE6BP35913 854 aa20.22■□□□□ 0.83
CLK3P2-201ENST00000427566 COPS6Q7L5N1 327 aa20.22■□□□□ 0.83
CLK3P2-201ENST00000427566 XAGE3Q8WTP9 111 aa20.22■□□□□ 0.83
CLK3P2-201ENST00000427566 TPTE2Q6XPS3 522 aa20.21■□□□□ 0.83
CLK3P2-201ENST00000427566 ARHGAP27Q6ZUM4 889 aa20.21■□□□□ 0.83
CLK3P2-201ENST00000427566 ZNF622Q969S3 477 aaKnown RBP eCLIP20.21■□□□□ 0.83
CLK3P2-201ENST00000427566 BRIP1Q9BX63 1249 aa20.21■□□□□ 0.83
CLK3P2-201ENST00000427566 DBF4Q9UBU7 674 aaPredicted RBP20.21■□□□□ 0.83
CLK3P2-201ENST00000427566 RGL2O15211 777 aa20.2■□□□□ 0.82
CLK3P2-201ENST00000427566 TRMT2AQ8IZ69 625 aaKnown RBP20.2■□□□□ 0.82
CLK3P2-201ENST00000427566 PHAXQ9H814 394 aaKnown RBP20.2■□□□□ 0.82
CLK3P2-201ENST00000427566 GIGYF2Q6Y7W6 1299 aaKnown RBP20.19■□□□□ 0.82
CLK3P2-201ENST00000427566 CCDC30Q5VVM6 783 aa20.18■□□□□ 0.82
CLK3P2-201ENST00000427566 GOLGB1Q14789 3259 aaKnown RBP20.18■□□□□ 0.82
CLK3P2-201ENST00000427566 CCDC88AQ3V6T2 1871 aa20.18■□□□□ 0.82
CLK3P2-201ENST00000427566 ARFGEF2Q9Y6D5 1785 aa20.17■□□□□ 0.82
CLK3P2-201ENST00000427566 ATP10DQ9P241 1426 aa20.17■□□□□ 0.82
CLK3P2-201ENST00000427566 NUTM1Q86Y26 1132 aa20.17■□□□□ 0.82
CLK3P2-201ENST00000427566 TTLL6Q8N841 843 aa20.17■□□□□ 0.82
CLK3P2-201ENST00000427566 NYXQ9GZU5 481 aa20.17■□□□□ 0.82
CLK3P2-201ENST00000427566 UBN2Q6ZU65 1347 aa20.16■□□□□ 0.82
CLK3P2-201ENST00000427566 HYPKQ9NX55 129 aa20.16■□□□□ 0.82
CLK3P2-201ENST00000427566 ZNF219Q9P2Y4 722 aaPredicted RBP20.16■□□□□ 0.82
CLK3P2-201ENST00000427566 PDZRN3Q9UPQ7 1066 aa20.16■□□□□ 0.82
CLK3P2-201ENST00000427566 TNRC6CQ9HCJ0 1690 aaKnown RBP20.15■□□□□ 0.82
CLK3P2-201ENST00000427566 UTRNP46939 3433 aa20.15■□□□□ 0.82
CLK3P2-201ENST00000427566 SUSD4Q5VX71 490 aa20.15■□□□□ 0.82
CLK3P2-201ENST00000427566 G2E3Q7L622 706 aa20.15■□□□□ 0.82
CLK3P2-201ENST00000427566 ZNF34Q8IZ26 560 aa20.15■□□□□ 0.82
CLK3P2-201ENST00000427566 SLX4Q8IY92 1834 aa20.15■□□□□ 0.82
CLK3P2-201ENST00000427566 SBF1O95248 1867 aa20.14■□□□□ 0.82
CLK3P2-201ENST00000427566 ERFEQ4G0M1 354 aa20.14■□□□□ 0.81
CLK3P2-201ENST00000427566 HSP90AB3PQ58FF7 597 aa20.14■□□□□ 0.81
CLK3P2-201ENST00000427566 PPP1R42Q7Z4L9 355 aa20.14■□□□□ 0.81
CLK3P2-201ENST00000427566 ZNF784Q8NCA9 323 aaPredicted RBP20.14■□□□□ 0.81
CLK3P2-201ENST00000427566 ZNF428Q96B54 188 aa20.14■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms