RNA–Protein interactions for RNA: ENST00000427419.5

SLC40A1-204, Transcript of solute carrier family 40 member 1, humanhuman

TSL 1 (best)

Gene SLC40A1, Length 299 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC40A1-204ENST00000427419 GPBP1L1Q9HC44 474 aaPredicted RBP13.16□□□□□ -0.3
SLC40A1-204ENST00000427419 TPTE2Q6XPS3 522 aa13.15□□□□□ -0.3
SLC40A1-204ENST00000427419 NBPF5PQ86XG9 351 aaPredicted RBP13.15□□□□□ -0.3
SLC40A1-204ENST00000427419 PIP4K2AP48426 406 aaPredicted RBP13.14□□□□□ -0.31
SLC40A1-204ENST00000427419 NEUROD2Q15784 382 aa13.14□□□□□ -0.31
SLC40A1-204ENST00000427419 NYXQ9GZU5 481 aa13.14□□□□□ -0.31
SLC40A1-204ENST00000427419 NIP7Q9Y221 180 aaKnown RBP eCLIP13.14□□□□□ -0.31
SLC40A1-204ENST00000427419 ANKRD31Q8N7Z5 1873 aa13.14□□□□□ -0.31
SLC40A1-204ENST00000427419 MAP3K15Q6ZN16 1313 aa13.13□□□□□ -0.31
SLC40A1-204ENST00000427419 ZC3H4Q9UPT8 1303 aaKnown RBP13.13□□□□□ -0.31
SLC40A1-204ENST00000427419 CHL1O00533 1208 aa13.13□□□□□ -0.31
SLC40A1-204ENST00000427419 HOXB7P09629 217 aa13.13□□□□□ -0.31
SLC40A1-204ENST00000427419 SOGA3Q5TF21 947 aa13.13□□□□□ -0.31
SLC40A1-204ENST00000427419 CNKSR1Q969H4 720 aa13.13□□□□□ -0.31
SLC40A1-204ENST00000427419 RRP7AQ9Y3A4 280 aaKnown RBP13.13□□□□□ -0.31
SLC40A1-204ENST00000427419 IBTKQ9P2D0 1353 aaPredicted RBP13.12□□□□□ -0.31
SLC40A1-204ENST00000427419 ANP32CO43423 234 aa13.12□□□□□ -0.31
SLC40A1-204ENST00000427419 C1QTNF8P60827 252 aa13.12□□□□□ -0.31
SLC40A1-204ENST00000427419 STYK1Q6J9G0 422 aa13.12□□□□□ -0.31
SLC40A1-204ENST00000427419 CFAP44Q96MT7 982 aa13.12□□□□□ -0.31
SLC40A1-204ENST00000427419 CHMP4AQ9BY43 222 aa13.12□□□□□ -0.31
SLC40A1-204ENST00000427419 TRIM35Q9UPQ4 493 aa13.12□□□□□ -0.31
SLC40A1-204ENST00000427419 NUP98P52948 1817 aa13.11□□□□□ -0.31
SLC40A1-204ENST00000427419 MYL6BP14649 208 aa13.11□□□□□ -0.31
SLC40A1-204ENST00000427419 GTF2E1P29083 439 aaPredicted RBP13.11□□□□□ -0.31
SLC40A1-204ENST00000427419 ZNF622Q969S3 477 aaKnown RBP eCLIP13.11□□□□□ -0.31
SLC40A1-204ENST00000427419 MASTLQ96GX5 879 aa13.11□□□□□ -0.31
SLC40A1-204ENST00000427419 ARFGEF2Q9Y6D5 1785 aa13.1□□□□□ -0.31
SLC40A1-204ENST00000427419 SRGNP10124 158 aa13.1□□□□□ -0.31
SLC40A1-204ENST00000427419 EIF2S2P20042 333 aaKnown RBP13.1□□□□□ -0.31
SLC40A1-204ENST00000427419 PARP10Q53GL7 1025 aa13.1□□□□□ -0.31
SLC40A1-204ENST00000427419 HSP90AB3PQ58FF7 597 aa13.1□□□□□ -0.31
SLC40A1-204ENST00000427419 C9orf131Q5VYM1 1079 aa13.1□□□□□ -0.31
SLC40A1-204ENST00000427419 COL11A2P13942 1736 aaPredicted RBP13.1□□□□□ -0.31
SLC40A1-204ENST00000427419 SBF1O95248 1867 aa13.1□□□□□ -0.31
SLC40A1-204ENST00000427419 KLRG2A4D1S0 409 aaPredicted RBP13.09□□□□□ -0.31
SLC40A1-204ENST00000427419 APAF1O14727 1248 aa13.09□□□□□ -0.31
SLC40A1-204ENST00000427419 NPR1P16066 1061 aa13.09□□□□□ -0.31
SLC40A1-204ENST00000427419 LMNB1P20700 586 aa13.09□□□□□ -0.31
SLC40A1-204ENST00000427419 GNAI1P63096 354 aa13.09□□□□□ -0.31
SLC40A1-204ENST00000427419 HLFQ16534 295 aa13.09□□□□□ -0.31
SLC40A1-204ENST00000427419 NCBP3Q53F19 620 aaKnown RBP13.09□□□□□ -0.31
SLC40A1-204ENST00000427419 GIGYF2Q6Y7W6 1299 aaKnown RBP13.09□□□□□ -0.31
SLC40A1-204ENST00000427419 NGEFQ8N5V2 710 aa13.09□□□□□ -0.31
SLC40A1-204ENST00000427419 IFT57Q9NWB7 429 aa13.09□□□□□ -0.31
SLC40A1-204ENST00000427419 RNF181Q9P0P0 153 aa13.09□□□□□ -0.31
SLC40A1-204ENST00000427419 LAS1LQ9Y4W2 734 aaKnown RBP13.09□□□□□ -0.31
SLC40A1-204ENST00000427419 RNF123Q5XPI4 1314 aa13.09□□□□□ -0.31
SLC40A1-204ENST00000427419 KDM2BQ8NHM5 1336 aa13.09□□□□□ -0.31
SLC40A1-204ENST00000427419 RIC1Q4ADV7 1423 aa13.08□□□□□ -0.32
SLC40A1-204ENST00000427419 TTLL7Q6ZT98 887 aa13.08□□□□□ -0.32
SLC40A1-204ENST00000427419 PPP1R42Q7Z4L9 355 aa13.08□□□□□ -0.32
SLC40A1-204ENST00000427419 DDX21Q9NR30 783 aaKnown RBP eCLIP13.08□□□□□ -0.32
SLC40A1-204ENST00000427419 ALDH1B1P30837 517 aa13.07□□□□□ -0.32
SLC40A1-204ENST00000427419 PDIA6Q15084 440 aa13.07□□□□□ -0.32
SLC40A1-204ENST00000427419 ZNF526Q8TF50 670 aaPredicted RBP13.07□□□□□ -0.32
SLC40A1-204ENST00000427419 ZBTB3Q9H5J0 574 aa13.07□□□□□ -0.32
SLC40A1-204ENST00000427419 LTBP3Q9NS15 1303 aa13.07□□□□□ -0.32
SLC40A1-204ENST00000427419 ZNF853P0CG23 659 aa13.06□□□□□ -0.32
SLC40A1-204ENST00000427419 CCDC27Q2M243 656 aa13.06□□□□□ -0.32
SLC40A1-204ENST00000427419 HDGFL1Q5TGJ6 251 aa13.06□□□□□ -0.32
SLC40A1-204ENST00000427419 PRPF40BQ6NWY9 871 aaKnown RBP13.06□□□□□ -0.32
SLC40A1-204ENST00000427419 LRP10Q7Z4F1 713 aa13.06□□□□□ -0.32
SLC40A1-204ENST00000427419 ZNF34Q8IZ26 560 aa13.06□□□□□ -0.32
SLC40A1-204ENST00000427419 CCDC24Q8N4L8 307 aa13.06□□□□□ -0.32
SLC40A1-204ENST00000427419 DBF4Q9UBU7 674 aaPredicted RBP13.06□□□□□ -0.32
SLC40A1-204ENST00000427419 FER1L6Q2WGJ9 1857 aa13.06□□□□□ -0.32
SLC40A1-204ENST00000427419 ANKRD36CQ5JPF3 1778 aa13.05□□□□□ -0.32
SLC40A1-204ENST00000427419 C21orf2O43822 256 aa13.05□□□□□ -0.32
SLC40A1-204ENST00000427419 TAOK3Q9H2K8 898 aa13.05□□□□□ -0.32
SLC40A1-204ENST00000427419 MRS2Q9HD23 443 aa13.05□□□□□ -0.32
SLC40A1-204ENST00000427419 MBIPQ9NS73 344 aa13.05□□□□□ -0.32
SLC40A1-204ENST00000427419 HYPKQ9NX55 129 aa13.05□□□□□ -0.32
SLC40A1-204ENST00000427419 CACNA1SQ13698 1873 aa13.04□□□□□ -0.32
SLC40A1-204ENST00000427419 DICER1Q9UPY3 1922 aaKnown RBP13.04□□□□□ -0.32
SLC40A1-204ENST00000427419 FAM177BA6PVY3 158 aa13.04□□□□□ -0.32
SLC40A1-204ENST00000427419 CRY2Q49AN0 593 aa13.04□□□□□ -0.32
SLC40A1-204ENST00000427419 GRIPAP1Q4V328 841 aa13.04□□□□□ -0.32
SLC40A1-204ENST00000427419 CCDC93Q567U6 631 aa13.04□□□□□ -0.32
SLC40A1-204ENST00000427419 DUSP27Q5VZP5 1158 aa13.04□□□□□ -0.32
SLC40A1-204ENST00000427419 CC2D2BQ6DHV5 1058 aa13.04□□□□□ -0.32
SLC40A1-204ENST00000427419 COPS6Q7L5N1 327 aa13.04□□□□□ -0.32
SLC40A1-204ENST00000427419 TNRC6CQ9HCJ0 1690 aaKnown RBP13.04□□□□□ -0.32
SLC40A1-204ENST00000427419 SLX4Q8IY92 1834 aa13.04□□□□□ -0.32
SLC40A1-204ENST00000427419 CCDC88AQ3V6T2 1871 aa13.04□□□□□ -0.32
SLC40A1-204ENST00000427419 NFKBIEO00221 500 aa13.03□□□□□ -0.32
SLC40A1-204ENST00000427419 KIF3CO14782 793 aa13.03□□□□□ -0.32
SLC40A1-204ENST00000427419 GPTP24298 496 aa13.03□□□□□ -0.32
SLC40A1-204ENST00000427419 RASSF7Q02833 373 aa13.03□□□□□ -0.32
SLC40A1-204ENST00000427419 PROSER3Q2NL68 480 aa13.03□□□□□ -0.32
SLC40A1-204ENST00000427419 C16orf71Q8IYS4 520 aaPredicted RBP13.03□□□□□ -0.32
SLC40A1-204ENST00000427419 RTKN2Q8IZC4 609 aa13.03□□□□□ -0.32
SLC40A1-204ENST00000427419 XAGE3Q8WTP9 111 aa13.03□□□□□ -0.32
SLC40A1-204ENST00000427419 RPGRQ92834 1020 aaKnown RBP13.03□□□□□ -0.32
SLC40A1-204ENST00000427419 UTP14AQ9BVJ6 771 aaKnown RBP13.03□□□□□ -0.32
SLC40A1-204ENST00000427419 CHPF2Q9P2E5 772 aa13.03□□□□□ -0.32
SLC40A1-204ENST00000427419 UBN2Q6ZU65 1347 aa13.03□□□□□ -0.32
SLC40A1-204ENST00000427419 TIAM2Q8IVF5 1701 aa13.02□□□□□ -0.32
SLC40A1-204ENST00000427419 SENP3-EIF4A1A0A087X0R7 540 aa13.02□□□□□ -0.33
SLC40A1-204ENST00000427419 TOMM70O94826 608 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms