RNA–Protein interactions for RNA: ENST00000426909.1

SYNC-204, Transcript of syncoilin, intermediate filament protein, humanhuman

TSL 4

Gene SYNC, Length 552 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNC-204ENST00000426909 COL15A1P39059 1388 aa13.94□□□□□ -0.18
SYNC-204ENST00000426909 C4AP0C0L4 1744 aa13.93□□□□□ -0.18
SYNC-204ENST00000426909 CHL1O00533 1208 aa13.93□□□□□ -0.18
SYNC-204ENST00000426909 ZPR1O75312 459 aa13.93□□□□□ -0.18
SYNC-204ENST00000426909 KLHL34Q8N239 644 aa13.93□□□□□ -0.18
SYNC-204ENST00000426909 TSPYL4Q9UJ04 414 aa13.93□□□□□ -0.18
SYNC-204ENST00000426909 KDM3BQ7LBC6 1761 aa13.93□□□□□ -0.18
SYNC-204ENST00000426909 USP42Q9H9J4 1324 aaKnown RBP13.92□□□□□ -0.18
SYNC-204ENST00000426909 A0A087WZG4 1122 aa13.92□□□□□ -0.18
SYNC-204ENST00000426909 RLBP1P12271 317 aa13.92□□□□□ -0.18
SYNC-204ENST00000426909 GYS1P13807 737 aa13.92□□□□□ -0.18
SYNC-204ENST00000426909 TRIM27P14373 513 aa13.92□□□□□ -0.18
SYNC-204ENST00000426909 NOB1Q9ULX3 412 aaKnown RBP13.92□□□□□ -0.18
SYNC-204ENST00000426909 IL6STP40189 918 aaPredicted RBP13.91□□□□□ -0.18
SYNC-204ENST00000426909 TWISTNBQ3B726 338 aaPredicted RBP13.91□□□□□ -0.18
SYNC-204ENST00000426909 RWDD1Q9H446 243 aaPredicted RBP13.91□□□□□ -0.18
SYNC-204ENST00000426909 MMP10P09238 476 aa13.9□□□□□ -0.18
SYNC-204ENST00000426909 EIF5P55010 431 aaKnown RBP13.9□□□□□ -0.18
SYNC-204ENST00000426909 EIF4A1P60842 406 aaKnown RBP13.9□□□□□ -0.18
SYNC-204ENST00000426909 MRPL50Q8N5N7 158 aaKnown RBP13.9□□□□□ -0.18
SYNC-204ENST00000426909 SRP68Q9UHB9 627 aaKnown RBP13.9□□□□□ -0.18
SYNC-204ENST00000426909 NARFQ9UHQ1 456 aa13.9□□□□□ -0.18
SYNC-204ENST00000426909 ZNF330Q9Y3S2 320 aaPredicted RBP13.9□□□□□ -0.18
SYNC-204ENST00000426909 CD2APQ9Y5K6 639 aa13.9□□□□□ -0.18
SYNC-204ENST00000426909 USP16Q9Y5T5 823 aa13.9□□□□□ -0.18
SYNC-204ENST00000426909 PRAMEF22A3QJZ6 481 aa13.89□□□□□ -0.19
SYNC-204ENST00000426909 A1BGP04217 495 aa13.89□□□□□ -0.19
SYNC-204ENST00000426909 USPL1Q5W0Q7 1092 aa13.89□□□□□ -0.19
SYNC-204ENST00000426909 API5Q9BZZ5 524 aaKnown RBP13.89□□□□□ -0.19
SYNC-204ENST00000426909 PARP3Q9Y6F1 533 aa13.89□□□□□ -0.19
SYNC-204ENST00000426909 LAMB4A4D0S4 1761 aa13.88□□□□□ -0.19
SYNC-204ENST00000426909 GIGYF1O75420 1035 aaPredicted RBP13.88□□□□□ -0.19
SYNC-204ENST00000426909 PDE4AP27815 886 aa13.87□□□□□ -0.19
SYNC-204ENST00000426909 HDAC1Q13547 482 aaPredicted RBP13.87□□□□□ -0.19
SYNC-204ENST00000426909 C8orf58Q8NAV2 365 aa13.87□□□□□ -0.19
SYNC-204ENST00000426909 BACH2Q9BYV9 841 aa13.87□□□□□ -0.19
SYNC-204ENST00000426909 IGHDP01880 384 aa13.86□□□□□ -0.19
SYNC-204ENST00000426909 ITPRIPQ8IWB1 547 aa13.86□□□□□ -0.19
SYNC-204ENST00000426909 TSPYL6Q8N831 410 aa13.86□□□□□ -0.19
SYNC-204ENST00000426909 TNNQ9UQP3 1299 aa13.86□□□□□ -0.19
SYNC-204ENST00000426909 ABCC4O15439 1325 aa13.86□□□□□ -0.19
SYNC-204ENST00000426909 TMEM57Q8N5G2 664 aa13.85□□□□□ -0.19
SYNC-204ENST00000426909 NLGN2Q8NFZ4 835 aa13.85□□□□□ -0.19
SYNC-204ENST00000426909 ZBTB40Q9NUA8 1239 aa13.85□□□□□ -0.19
SYNC-204ENST00000426909 TBC1D2BQ9UPU7 963 aa13.85□□□□□ -0.19
SYNC-204ENST00000426909 PCDHB15Q9Y5E8 787 aa13.85□□□□□ -0.19
SYNC-204ENST00000426909 PTPRCP08575 1304 aa13.85□□□□□ -0.19
SYNC-204ENST00000426909 ERBB4Q15303 1308 aa13.85□□□□□ -0.19
SYNC-204ENST00000426909 SCN7AQ01118 1682 aa13.85□□□□□ -0.19
SYNC-204ENST00000426909 ANP32AP39687 249 aaKnown RBP13.84□□□□□ -0.19
SYNC-204ENST00000426909 PIP4K2AP48426 406 aaPredicted RBP13.84□□□□□ -0.19
SYNC-204ENST00000426909 DZIP3Q86Y13 1208 aaKnown RBP13.84□□□□□ -0.19
SYNC-204ENST00000426909 CHMP4AQ9BY43 222 aa13.84□□□□□ -0.19
SYNC-204ENST00000426909 ZNF652Q9Y2D9 606 aa13.84□□□□□ -0.19
SYNC-204ENST00000426909 C10orf71Q711Q0 1435 aa13.83□□□□□ -0.2
SYNC-204ENST00000426909 NBPF26B4DH59 902 aa13.83□□□□□ -0.2
SYNC-204ENST00000426909 POLRMTO00411 1230 aaKnown RBP13.83□□□□□ -0.2
SYNC-204ENST00000426909 TM4SF1P30408 202 aa13.83□□□□□ -0.2
SYNC-204ENST00000426909 DDR1Q08345 913 aa13.83□□□□□ -0.2
SYNC-204ENST00000426909 GPR162Q16538 588 aa13.83□□□□□ -0.2
SYNC-204ENST00000426909 NBPF10Q6P3W6 841 aaKnown RBP13.83□□□□□ -0.2
SYNC-204ENST00000426909 NBPF15Q8N660 670 aa13.83□□□□□ -0.2
SYNC-204ENST00000426909 BCL2L12Q9HB09 334 aa13.83□□□□□ -0.2
SYNC-204ENST00000426909 GOLGB1Q14789 3259 aaKnown RBP13.82□□□□□ -0.2
SYNC-204ENST00000426909 RGL2O15211 777 aa13.82□□□□□ -0.2
SYNC-204ENST00000426909 CAMTA2O94983 1202 aa13.82□□□□□ -0.2
SYNC-204ENST00000426909 HOXB7P09629 217 aa13.82□□□□□ -0.2
SYNC-204ENST00000426909 TGFB2P61812 414 aa13.82□□□□□ -0.2
SYNC-204ENST00000426909 NFIXQ14938 502 aa13.82□□□□□ -0.2
SYNC-204ENST00000426909 FAM161AQ3B820 660 aa13.82□□□□□ -0.2
SYNC-204ENST00000426909 UTRNP46939 3433 aa13.81□□□□□ -0.2
SYNC-204ENST00000426909 ELL2O00472 640 aaPredicted RBP13.81□□□□□ -0.2
SYNC-204ENST00000426909 MYL6BP14649 208 aa13.81□□□□□ -0.2
SYNC-204ENST00000426909 EIF2S2P20042 333 aaKnown RBP13.81□□□□□ -0.2
SYNC-204ENST00000426909 CLEC4GQ6UXB4 293 aa13.81□□□□□ -0.2
SYNC-204ENST00000426909 CARMIL3Q8ND23 1372 aa13.81□□□□□ -0.2
SYNC-204ENST00000426909 BCORQ6W2J9 1755 aa13.81□□□□□ -0.2
SYNC-204ENST00000426909 TBC1D9BQ66K14 1250 aa13.8□□□□□ -0.2
SYNC-204ENST00000426909 KIF6Q6ZMV9 814 aa13.8□□□□□ -0.2
SYNC-204ENST00000426909 BICDL1Q6ZP65 573 aa13.8□□□□□ -0.2
SYNC-204ENST00000426909 SETDB2Q96T68 719 aa13.8□□□□□ -0.2
SYNC-204ENST00000426909 KIF13BQ9NQT8 1826 aa13.8□□□□□ -0.2
SYNC-204ENST00000426909 CACNA1FO60840 1977 aa13.8□□□□□ -0.2
SYNC-204ENST00000426909 ZBTB7BO15156 539 aaPredicted RBP13.79□□□□□ -0.2
SYNC-204ENST00000426909 SERPINB2P05120 415 aa13.79□□□□□ -0.2
SYNC-204ENST00000426909 INTS3Q68E01 1043 aaKnown RBP13.79□□□□□ -0.2
SYNC-204ENST00000426909 PXDNLA1KZ92 1463 aa13.79□□□□□ -0.2
SYNC-204ENST00000426909 ERVV-1B6SEH8 477 aa13.78□□□□□ -0.2
SYNC-204ENST00000426909 GRIN3BO60391 1043 aa13.78□□□□□ -0.2
SYNC-204ENST00000426909 KRT24Q2M2I5 525 aa13.78□□□□□ -0.2
SYNC-204ENST00000426909 HDGFL1Q5TGJ6 251 aa13.78□□□□□ -0.2
SYNC-204ENST00000426909 SMC5Q8IY18 1101 aa13.78□□□□□ -0.2
SYNC-204ENST00000426909 NPHP1O15259 732 aa13.77□□□□□ -0.21
SYNC-204ENST00000426909 RGS3P49796 1198 aa13.77□□□□□ -0.21
SYNC-204ENST00000426909 CCDC30Q5VVM6 783 aa13.77□□□□□ -0.21
SYNC-204ENST00000426909 MAP3K15Q6ZN16 1313 aa13.77□□□□□ -0.21
SYNC-204ENST00000426909 STK31Q9BXU1 1019 aa13.77□□□□□ -0.21
SYNC-204ENST00000426909 NRXN2Q9P2S2 1712 aa13.77□□□□□ -0.21
SYNC-204ENST00000426909 PDZRN3Q9UPQ7 1066 aa13.77□□□□□ -0.21
SYNC-204ENST00000426909 A0A0G2JLW4 131 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms