RNA–Protein interactions for RNA: ENST00000426511.5

SEMA3F-205, Transcript of semaphorin 3F, humanhuman

TSL 5

Gene SEMA3F, Length 757 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3F-205ENST00000426511 GPBP1L1Q9HC44 474 aaPredicted RBP28.88■■■□□ 2.21
SEMA3F-205ENST00000426511 PDE6BP35913 854 aa28.87■■■□□ 2.21
SEMA3F-205ENST00000426511 ZNF622Q969S3 477 aaKnown RBP eCLIP28.87■■■□□ 2.21
SEMA3F-205ENST00000426511 BRIP1Q9BX63 1249 aa28.87■■■□□ 2.21
SEMA3F-205ENST00000426511 TRIM35Q9UPQ4 493 aa28.87■■■□□ 2.21
SEMA3F-205ENST00000426511 NIP7Q9Y221 180 aaKnown RBP eCLIP28.87■■■□□ 2.21
SEMA3F-205ENST00000426511 HLFQ16534 295 aa28.86■■■□□ 2.21
SEMA3F-205ENST00000426511 KIF6Q6ZMV9 814 aa28.86■■■□□ 2.21
SEMA3F-205ENST00000426511 TTLL6Q8N841 843 aa28.86■■■□□ 2.21
SEMA3F-205ENST00000426511 ANKRD31Q8N7Z5 1873 aa28.85■■■□□ 2.21
SEMA3F-205ENST00000426511 BABAM1Q9NWV8 329 aa28.85■■■□□ 2.21
SEMA3F-205ENST00000426511 DLEC1Q9Y238 1755 aa28.84■■■□□ 2.21
SEMA3F-205ENST00000426511 TTLL7Q6ZT98 887 aa28.84■■■□□ 2.21
SEMA3F-205ENST00000426511 NECTIN2Q92692 538 aa28.84■■■□□ 2.21
SEMA3F-205ENST00000426511 C9orf131Q5VYM1 1079 aa28.83■■■□□ 2.21
SEMA3F-205ENST00000426511 ZNF219Q9P2Y4 722 aaPredicted RBP28.83■■■□□ 2.21
SEMA3F-205ENST00000426511 APAF1O14727 1248 aa28.82■■■□□ 2.2
SEMA3F-205ENST00000426511 C1QTNF8P60827 252 aa28.82■■■□□ 2.2
SEMA3F-205ENST00000426511 ZBTB3Q9H5J0 574 aa28.82■■■□□ 2.2
SEMA3F-205ENST00000426511 MAP3K15Q6ZN16 1313 aa28.8■■■□□ 2.2
SEMA3F-205ENST00000426511 CCDC184Q52MB2 194 aa28.8■■■□□ 2.2
SEMA3F-205ENST00000426511 RNF181Q9P0P0 153 aa28.8■■■□□ 2.2
SEMA3F-205ENST00000426511 PDZRN3Q9UPQ7 1066 aa28.8■■■□□ 2.2
SEMA3F-205ENST00000426511 COL11A2P13942 1736 aaPredicted RBP28.8■■■□□ 2.2
SEMA3F-205ENST00000426511 ERBB4Q15303 1308 aa28.79■■■□□ 2.2
SEMA3F-205ENST00000426511 CHL1O00533 1208 aa28.79■■■□□ 2.2
SEMA3F-205ENST00000426511 ANXA1P04083 346 aa28.79■■■□□ 2.2
SEMA3F-205ENST00000426511 GTF2E1P29083 439 aaPredicted RBP28.79■■■□□ 2.2
SEMA3F-205ENST00000426511 RASSF7Q02833 373 aa28.79■■■□□ 2.2
SEMA3F-205ENST00000426511 KRT24Q2M2I5 525 aa28.79■■■□□ 2.2
SEMA3F-205ENST00000426511 TPTE2Q6XPS3 522 aa28.79■■■□□ 2.2
SEMA3F-205ENST00000426511 ERVV-1B6SEH8 477 aa28.78■■■□□ 2.2
SEMA3F-205ENST00000426511 RGL2O15211 777 aa28.77■■■□□ 2.2
SEMA3F-205ENST00000426511 ANP32CO43423 234 aa28.77■■■□□ 2.2
SEMA3F-205ENST00000426511 GPTP24298 496 aa28.77■■■□□ 2.2
SEMA3F-205ENST00000426511 PROSER3Q2NL68 480 aa28.76■■■□□ 2.19
SEMA3F-205ENST00000426511 SENP3-EIF4A1A0A087X0R7 540 aa28.75■■■□□ 2.19
SEMA3F-205ENST00000426511 C21orf2O43822 256 aa28.74■■■□□ 2.19
SEMA3F-205ENST00000426511 PDIA6Q15084 440 aa28.74■■■□□ 2.19
SEMA3F-205ENST00000426511 NUP98P52948 1817 aa28.73■■■□□ 2.19
SEMA3F-205ENST00000426511 SRGNP10124 158 aa28.73■■■□□ 2.19
SEMA3F-205ENST00000426511 AIMP1Q12904 312 aaKnown RBP28.73■■■□□ 2.19
SEMA3F-205ENST00000426511 CNKSR1Q969H4 720 aa28.73■■■□□ 2.19
SEMA3F-205ENST00000426511 MASTLQ96GX5 879 aa28.73■■■□□ 2.19
SEMA3F-205ENST00000426511 STYK1Q6J9G0 422 aa28.72■■■□□ 2.19
SEMA3F-205ENST00000426511 NUTM1Q86Y26 1132 aa28.72■■■□□ 2.19
SEMA3F-205ENST00000426511 CFAP44Q96MT7 982 aa28.72■■■□□ 2.19
SEMA3F-205ENST00000426511 MRS2Q9HD23 443 aa28.72■■■□□ 2.19
SEMA3F-205ENST00000426511 CACNA1SQ13698 1873 aa28.72■■■□□ 2.19
SEMA3F-205ENST00000426511 NYXQ9GZU5 481 aa28.71■■■□□ 2.19
SEMA3F-205ENST00000426511 HDGFL1Q5TGJ6 251 aa28.7■■■□□ 2.18
SEMA3F-205ENST00000426511 PRPF40BQ6NWY9 871 aaKnown RBP28.7■■■□□ 2.18
SEMA3F-205ENST00000426511 MBIPQ9NS73 344 aa28.7■■■□□ 2.18
SEMA3F-205ENST00000426511 CALD1Q05682 793 aaKnown RBP28.69■■■□□ 2.18
SEMA3F-205ENST00000426511 GIGYF2Q6Y7W6 1299 aaKnown RBP28.69■■■□□ 2.18
SEMA3F-205ENST00000426511 LRP10Q7Z4F1 713 aa28.69■■■□□ 2.18
SEMA3F-205ENST00000426511 XAGE3Q8WTP9 111 aa28.69■■■□□ 2.18
SEMA3F-205ENST00000426511 UBN2Q6ZU65 1347 aa28.69■■■□□ 2.18
SEMA3F-205ENST00000426511 NPR1P16066 1061 aa28.68■■■□□ 2.18
SEMA3F-205ENST00000426511 LMNB1P20700 586 aa28.68■■■□□ 2.18
SEMA3F-205ENST00000426511 ERFEQ4G0M1 354 aa28.68■■■□□ 2.18
SEMA3F-205ENST00000426511 COPS6Q7L5N1 327 aa28.68■■■□□ 2.18
SEMA3F-205ENST00000426511 CHPF2Q9P2E5 772 aa28.68■■■□□ 2.18
SEMA3F-205ENST00000426511 SBF1O95248 1867 aa28.68■■■□□ 2.18
SEMA3F-205ENST00000426511 ABCC12Q96J65 1359 aa28.67■■■□□ 2.18
SEMA3F-205ENST00000426511 NFKBIEO00221 500 aa28.67■■■□□ 2.18
SEMA3F-205ENST00000426511 SUSD4Q5VX71 490 aa28.67■■■□□ 2.18
SEMA3F-205ENST00000426511 DUSP27Q5VZP5 1158 aa28.66■■■□□ 2.18
SEMA3F-205ENST00000426511 ZNF34Q8IZ26 560 aa28.66■■■□□ 2.18
SEMA3F-205ENST00000426511 NMRK2Q9NPI5 230 aa28.66■■■□□ 2.18
SEMA3F-205ENST00000426511 DDX21Q9NR30 783 aaKnown RBP eCLIP28.66■■■□□ 2.18
SEMA3F-205ENST00000426511 IFT57Q9NWB7 429 aa28.66■■■□□ 2.18
SEMA3F-205ENST00000426511 SLX4Q8IY92 1834 aa28.66■■■□□ 2.18
SEMA3F-205ENST00000426511 PRELPP51888 382 aa28.65■■■□□ 2.18
SEMA3F-205ENST00000426511 GNAI1P63096 354 aa28.65■■■□□ 2.18
SEMA3F-205ENST00000426511 KIF3CO14782 793 aa28.64■■■□□ 2.18
SEMA3F-205ENST00000426511 TNRC6CQ9HCJ0 1690 aaKnown RBP28.64■■■□□ 2.17
SEMA3F-205ENST00000426511 ELL2O00472 640 aaPredicted RBP28.63■■■□□ 2.17
SEMA3F-205ENST00000426511 HOXB7P09629 217 aa28.63■■■□□ 2.17
SEMA3F-205ENST00000426511 PPP1R42Q7Z4L9 355 aa28.63■■■□□ 2.17
SEMA3F-205ENST00000426511 KDM2BQ8NHM5 1336 aa28.63■■■□□ 2.17
SEMA3F-205ENST00000426511 KLRG2A4D1S0 409 aaPredicted RBP28.62■■■□□ 2.17
SEMA3F-205ENST00000426511 ZNF853P0CG23 659 aa28.62■■■□□ 2.17
SEMA3F-205ENST00000426511 PARP10Q53GL7 1025 aa28.61■■■□□ 2.17
SEMA3F-205ENST00000426511 SOGA3Q5TF21 947 aa28.61■■■□□ 2.17
SEMA3F-205ENST00000426511 TAOK3Q9H2K8 898 aa28.61■■■□□ 2.17
SEMA3F-205ENST00000426511 DBF4Q9UBU7 674 aaPredicted RBP28.61■■■□□ 2.17
SEMA3F-205ENST00000426511 ARFGEF2Q9Y6D5 1785 aa28.6■■■□□ 2.17
SEMA3F-205ENST00000426511 CCDC88AQ3V6T2 1871 aa28.6■■■□□ 2.17
SEMA3F-205ENST00000426511 NTSR2O95665 410 aa28.6■■■□□ 2.17
SEMA3F-205ENST00000426511 RPGRQ92834 1020 aaKnown RBP28.6■■■□□ 2.17
SEMA3F-205ENST00000426511 IBTKQ9P2D0 1353 aaPredicted RBP28.6■■■□□ 2.17
SEMA3F-205ENST00000426511 HSP90AB3PQ58FF7 597 aa28.59■■■□□ 2.17
SEMA3F-205ENST00000426511 ZNF428Q96B54 188 aa28.59■■■□□ 2.17
SEMA3F-205ENST00000426511 UTP14AQ9BVJ6 771 aaKnown RBP28.59■■■□□ 2.17
SEMA3F-205ENST00000426511 TIAM2Q8IVF5 1701 aa28.58■■■□□ 2.17
SEMA3F-205ENST00000426511 FER1L6Q2WGJ9 1857 aa28.58■■■□□ 2.17
SEMA3F-205ENST00000426511 ALDH1B1P30837 517 aa28.58■■■□□ 2.17
SEMA3F-205ENST00000426511 CCDC93Q567U6 631 aa28.58■■■□□ 2.17
SEMA3F-205ENST00000426511 OLFM4Q6UX06 510 aa28.57■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms