RNA–Protein interactions for RNA: ENST00000426022.6

NEK11-203, Transcript of NIMA related kinase 11, humanhuman

TSL 3

Gene NEK11, Length 785 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK11-203ENST00000426022 PCDHB11Q9Y5F2 797 aa12.79□□□□□ -0.36
NEK11-203ENST00000426022 RIMS2Q9UQ26 1411 aa12.79□□□□□ -0.36
NEK11-203ENST00000426022 RPRD2Q5VT52 1461 aaKnown RBP12.78□□□□□ -0.36
NEK11-203ENST00000426022 PPP1R26Q5T8A7 1209 aaPredicted RBP12.78□□□□□ -0.36
NEK11-203ENST00000426022 TFIP11Q9UBB9 837 aaKnown RBP12.78□□□□□ -0.36
NEK11-203ENST00000426022 TMEM94Q12767 1356 aa12.78□□□□□ -0.36
NEK11-203ENST00000426022 E9PCH4 1651 aa12.77□□□□□ -0.36
NEK11-203ENST00000426022 USP17L5A8MUK1 530 aa12.77□□□□□ -0.37
NEK11-203ENST00000426022 MAFBQ9Y5Q3 323 aaPredicted RBP12.77□□□□□ -0.37
NEK11-203ENST00000426022 EMILIN1Q9Y6C2 1016 aa12.77□□□□□ -0.37
NEK11-203ENST00000426022 ZFYVE9O95405 1425 aa12.77□□□□□ -0.37
NEK11-203ENST00000426022 GCC2Q8IWJ2 1684 aa12.77□□□□□ -0.37
NEK11-203ENST00000426022 NRG2O14511 850 aaPredicted RBP12.76□□□□□ -0.37
NEK11-203ENST00000426022 GFRA3O60609 400 aa12.76□□□□□ -0.37
NEK11-203ENST00000426022 KCNA6P17658 529 aa12.76□□□□□ -0.37
NEK11-203ENST00000426022 CFAP70Q5T0N1 1121 aa12.76□□□□□ -0.37
NEK11-203ENST00000426022 TRAF7Q6Q0C0 670 aa12.76□□□□□ -0.37
NEK11-203ENST00000426022 KDM5AP29375 1690 aaKnown RBP12.76□□□□□ -0.37
NEK11-203ENST00000426022 MYO5BQ9ULV0 1848 aa12.76□□□□□ -0.37
NEK11-203ENST00000426022 TMEM131LA2VDJ0 1609 aa12.75□□□□□ -0.37
NEK11-203ENST00000426022 USP17L3A6NCW0 530 aa12.75□□□□□ -0.37
NEK11-203ENST00000426022 USP17L4A6NCW7 530 aa12.75□□□□□ -0.37
NEK11-203ENST00000426022 MED1Q15648 1581 aaPredicted RBP12.75□□□□□ -0.37
NEK11-203ENST00000426022 TSGA10IPQ3SY00 556 aa12.75□□□□□ -0.37
NEK11-203ENST00000426022 USP17L2Q6R6M4 530 aa12.75□□□□□ -0.37
NEK11-203ENST00000426022 USP17L1Q7RTZ2 530 aa12.75□□□□□ -0.37
NEK11-203ENST00000426022 IQGAP3Q86VI3 1631 aa12.75□□□□□ -0.37
NEK11-203ENST00000426022 PLEKHM2Q8IWE5 1019 aa12.75□□□□□ -0.37
NEK11-203ENST00000426022 TRIM52Q96A61 297 aa12.75□□□□□ -0.37
NEK11-203ENST00000426022 PGPEP1Q9NXJ5 209 aa12.75□□□□□ -0.37
NEK11-203ENST00000426022 XIRP1Q702N8 1843 aaKnown RBP12.74□□□□□ -0.37
NEK11-203ENST00000426022 FAM187AA6NFU0 413 aa12.74□□□□□ -0.37
NEK11-203ENST00000426022 HPS1Q92902 700 aa12.74□□□□□ -0.37
NEK11-203ENST00000426022 PLEKHG1Q9ULL1 1385 aa12.73□□□□□ -0.37
NEK11-203ENST00000426022 LZTS3O60299 673 aaPredicted RBP12.73□□□□□ -0.37
NEK11-203ENST00000426022 LAPTM4AQ15012 233 aa12.73□□□□□ -0.37
NEK11-203ENST00000426022 ZNF784Q8NCA9 323 aaPredicted RBP12.73□□□□□ -0.37
NEK11-203ENST00000426022 ARID3AQ99856 593 aa12.73□□□□□ -0.37
NEK11-203ENST00000426022 TMPRSS4Q9NRS4 437 aa12.73□□□□□ -0.37
NEK11-203ENST00000426022 RRBP1Q9P2E9 1410 aaKnown RBP12.72□□□□□ -0.37
NEK11-203ENST00000426022 NCOA4Q13772 614 aa12.72□□□□□ -0.37
NEK11-203ENST00000426022 OXLD1Q5BKU9 147 aa12.72□□□□□ -0.37
NEK11-203ENST00000426022 CDCA7Q9BWT1 371 aaPredicted RBP12.72□□□□□ -0.37
NEK11-203ENST00000426022 KLF16Q9BXK1 252 aaPredicted RBP12.72□□□□□ -0.37
NEK11-203ENST00000426022 LMOD1P29536 600 aaPredicted RBP12.71□□□□□ -0.37
NEK11-203ENST00000426022 WDR4P57081 412 aaKnown RBP12.71□□□□□ -0.37
NEK11-203ENST00000426022 ERVK-9P63128 1117 aa12.71□□□□□ -0.37
NEK11-203ENST00000426022 EML3Q32P44 896 aa12.71□□□□□ -0.37
NEK11-203ENST00000426022 DEPDC4Q8N2C3 294 aa12.71□□□□□ -0.37
NEK11-203ENST00000426022 ZIC2O95409 532 aaPredicted RBP12.7□□□□□ -0.38
NEK11-203ENST00000426022 MYT1Q01538 1121 aa12.7□□□□□ -0.38
NEK11-203ENST00000426022 ITPKCQ96DU7 683 aa12.7□□□□□ -0.38
NEK11-203ENST00000426022 CYLDQ9NQC7 956 aa12.7□□□□□ -0.38
NEK11-203ENST00000426022 NAIPQ13075 1403 aa12.7□□□□□ -0.38
NEK11-203ENST00000426022 NWD1Q149M9 1564 aa12.69□□□□□ -0.38
NEK11-203ENST00000426022 DGAT1O75907 488 aa12.69□□□□□ -0.38
NEK11-203ENST00000426022 MYCP01106 439 aaPredicted RBP12.69□□□□□ -0.38
NEK11-203ENST00000426022 TIMP2P16035 220 aa12.69□□□□□ -0.38
NEK11-203ENST00000426022 SCTRP47872 440 aa12.69□□□□□ -0.38
NEK11-203ENST00000426022 PKDCCQ504Y2 493 aa12.69□□□□□ -0.38
NEK11-203ENST00000426022 ZNF326Q5BKZ1 582 aaKnown RBP12.69□□□□□ -0.38
NEK11-203ENST00000426022 CC2D2BQ6DHV5 1058 aa12.69□□□□□ -0.38
NEK11-203ENST00000426022 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.69□□□□□ -0.38
NEK11-203ENST00000426022 SIRT1Q96EB6 747 aa12.69□□□□□ -0.38
NEK11-203ENST00000426022 IRX2Q9BZI1 471 aaPredicted RBP12.69□□□□□ -0.38
NEK11-203ENST00000426022 ADAMTS13Q76LX8 1427 aa12.69□□□□□ -0.38
NEK11-203ENST00000426022 NKTRP30414 1462 aaKnown RBP12.68□□□□□ -0.38
NEK11-203ENST00000426022 LILRA1O75019 489 aa12.68□□□□□ -0.38
NEK11-203ENST00000426022 AVPP01185 164 aa12.68□□□□□ -0.38
NEK11-203ENST00000426022 USP4Q13107 963 aa12.68□□□□□ -0.38
NEK11-203ENST00000426022 ZFAND3Q9H8U3 227 aa12.68□□□□□ -0.38
NEK11-203ENST00000426022 RFX1P22670 979 aa12.67□□□□□ -0.38
NEK11-203ENST00000426022 NOD1Q9Y239 953 aa12.67□□□□□ -0.38
NEK11-203ENST00000426022 TBX22Q9Y458 520 aa12.67□□□□□ -0.38
NEK11-203ENST00000426022 MSH6P52701 1360 aa12.67□□□□□ -0.38
NEK11-203ENST00000426022 FAM135BQ49AJ0 1406 aa12.65□□□□□ -0.38
NEK11-203ENST00000426022 PTPRUQ92729 1446 aa12.65□□□□□ -0.38
NEK11-203ENST00000426022 ROBO1Q9Y6N7 1651 aa12.65□□□□□ -0.38
NEK11-203ENST00000426022 SPHKAPQ2M3C7 1700 aa12.65□□□□□ -0.38
NEK11-203ENST00000426022 CLTCL1P53675 1640 aa12.64□□□□□ -0.39
NEK11-203ENST00000426022 SLAIN2Q9P270 581 aa12.64□□□□□ -0.39
NEK11-203ENST00000426022 MKRN1Q9UHC7 482 aaKnown RBP12.64□□□□□ -0.39
NEK11-203ENST00000426022 AMOTL2Q9Y2J4 779 aa12.64□□□□□ -0.39
NEK11-203ENST00000426022 CHD2O14647 1828 aaKnown RBP12.64□□□□□ -0.39
NEK11-203ENST00000426022 ATP5J2-PTCD1G3V325 749 aa12.63□□□□□ -0.39
NEK11-203ENST00000426022 CAPN5O15484 640 aaPredicted RBP12.63□□□□□ -0.39
NEK11-203ENST00000426022 Q6ZVU0 165 aa12.63□□□□□ -0.39
NEK11-203ENST00000426022 TRIM50Q86XT4 487 aa12.63□□□□□ -0.39
NEK11-203ENST00000426022 PBXIP1Q96AQ6 731 aa12.63□□□□□ -0.39
NEK11-203ENST00000426022 OSBPL3Q9H4L5 887 aa12.63□□□□□ -0.39
NEK11-203ENST00000426022 HFM1A2PYH4 1435 aa12.62□□□□□ -0.39
NEK11-203ENST00000426022 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.62□□□□□ -0.39
NEK11-203ENST00000426022 ADD1P35611 737 aaKnown RBP12.62□□□□□ -0.39
NEK11-203ENST00000426022 CBLBQ13191 982 aa12.62□□□□□ -0.39
NEK11-203ENST00000426022 CTC1Q2NKJ3 1217 aa12.62□□□□□ -0.39
NEK11-203ENST00000426022 VRTNQ9H8Y1 702 aa12.62□□□□□ -0.39
NEK11-203ENST00000426022 METP08581 1390 aa12.61□□□□□ -0.39
NEK11-203ENST00000426022 SRPK2P78362 688 aaKnown RBP12.61□□□□□ -0.39
NEK11-203ENST00000426022 CYP2U1Q7Z449 544 aa12.61□□□□□ -0.39
NEK11-203ENST00000426022 MEIOBQ8N635 442 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms